Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ABFV68_RS14585 Genome accession   NZ_CP156029
Coordinates   2993811..2996117 (-) Length   768 a.a.
NCBI ID   WP_041482505.1    Uniprot ID   -
Organism   Bacillus velezensis strain CH1     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2988811..3001117
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABFV68_RS14545 (ABFV68_14545) - 2989265..2989696 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  ABFV68_RS14550 (ABFV68_14550) - 2989696..2990037 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  ABFV68_RS14555 (ABFV68_14555) - 2990030..2991517 (+) 1488 WP_032867186.1 Na+/H+ antiporter subunit D -
  ABFV68_RS14560 (ABFV68_14560) - 2991523..2991999 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  ABFV68_RS14565 (ABFV68_14565) - 2991999..2992283 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  ABFV68_RS14570 (ABFV68_14570) mnhG 2992267..2992641 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  ABFV68_RS14575 (ABFV68_14575) - 2992681..2993064 (-) 384 WP_007408674.1 hotdog fold thioesterase -
  ABFV68_RS14580 (ABFV68_14580) comA 2993086..2993730 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  ABFV68_RS14585 (ABFV68_14585) comP 2993811..2996117 (-) 2307 WP_041482505.1 histidine kinase Regulator
  ABFV68_RS14590 (ABFV68_14590) comX 2996140..2996310 (-) 171 WP_015418105.1 competence pheromone ComX -
  ABFV68_RS14595 (ABFV68_14595) - 2996307..2997236 (-) 930 WP_231945405.1 polyprenyl synthetase family protein -
  ABFV68_RS14600 (ABFV68_14600) degQ 2997367..2997507 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  ABFV68_RS14605 (ABFV68_14605) - 2997970..2998311 (+) 342 WP_007408677.1 hypothetical protein -
  ABFV68_RS14610 (ABFV68_14610) - 2998318..2999541 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 89289.08 Da        Isoelectric Point: 8.7205

>NTDB_id=1001404 ABFV68_RS14585 WP_041482505.1 2993811..2996117(-) (comP) [Bacillus velezensis strain CH1]
MKKFLKFFSVALLLFSIFYFTLVVYYTQNGIIIGTNVVKVSNQELKVVDMTRSSYGRLMGLEIGDKIVEINGHKPNKENI
YGSYLAKVRQLKVERNDKLIKLDNFEFIYLDSPYSFFSYIVPGIFYLLSLICIFYIFRVNLKKDSISAYILICFLLCISI
AYLSAGGVTRGYSVNRYINLYTFLAVPVLYLNFLHQYFKELNVKFSRGIYILILYNLPLVNIICELFEKHIKYDVITSLN
LLTFLFEMMVVYVCLILYQIKHRKKDFAYLLKVLLVSNTIAFLPFTLLYIVPLVIFGQYVYSAVITAPFLLLIPLALVYQ
FVVNKIYNIDFLLGRLRYYCLLAVIPSIGIVWVFVVFMNKNRDFNTFQITLFVFLIMLSVFYFKEVLDYKFRLKRFSEKY
NYQDSIFKYTQLIKSVSVLNQVFTHLKATILDVLPVSKAYIFEISSGGEIVYFDKQSTEPNWYPYKDKFEKVNSEIGKII
EINQGFLMKIGERGTSSYVLLCLSSINTPRLTMDETSWLKTLSFYTSVSMENVLQIEELMDHLQNLKQQGSNPVWLKKLM
FTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDL
GLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGV
GCNQEKGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKVDIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=1001404 ABFV68_RS14585 WP_041482505.1 2993811..2996117(-) (comP) [Bacillus velezensis strain CH1]
TTGAAGAAGTTTTTAAAGTTTTTTTCGGTTGCCTTATTATTGTTCAGTATTTTCTATTTTACTTTAGTAGTTTATTATAC
TCAAAATGGAATAATTATAGGTACCAATGTAGTTAAAGTTTCTAATCAAGAACTGAAAGTTGTTGATATGACAAGATCCT
CCTATGGAAGATTAATGGGGTTGGAAATTGGAGACAAAATTGTTGAAATAAATGGACATAAACCAAATAAAGAAAACATT
TATGGCTCTTACTTAGCTAAAGTTAGACAATTAAAAGTTGAACGTAATGATAAATTAATTAAGTTAGATAACTTTGAATT
TATCTATTTAGATAGCCCGTACAGTTTCTTTTCATATATTGTACCAGGTATTTTTTATTTACTGAGTTTAATATGTATTT
TTTACATCTTTAGAGTTAATTTGAAGAAAGACAGCATATCAGCATATATTCTGATTTGTTTTTTGCTATGTATATCTATT
GCTTATTTAAGTGCCGGAGGAGTGACAAGGGGATACTCTGTAAATCGTTATATTAATCTTTATACATTTTTAGCAGTGCC
TGTTTTGTATCTTAATTTCCTGCATCAATATTTTAAAGAATTAAACGTGAAATTTTCACGAGGGATTTATATTTTAATTT
TGTATAATTTACCTTTAGTGAACATCATATGTGAACTATTTGAAAAGCATATAAAGTATGATGTGATTACAAGCCTTAAT
CTCTTAACTTTTTTATTTGAAATGATGGTGGTTTATGTATGTCTTATACTTTATCAAATCAAGCATAGAAAGAAAGATTT
TGCTTATTTGTTAAAAGTATTATTAGTATCTAATACCATTGCATTCTTACCTTTTACTTTATTATATATTGTTCCTCTTG
TGATCTTTGGACAATATGTATATAGTGCGGTAATCACTGCACCTTTTCTTTTGCTTATACCGTTAGCACTGGTATATCAA
TTTGTTGTTAATAAGATTTATAATATTGATTTTTTGTTGGGACGCTTGAGGTATTATTGTTTGTTGGCGGTTATTCCCTC
AATCGGTATTGTTTGGGTTTTTGTTGTGTTTATGAATAAAAATAGAGATTTTAATACTTTTCAAATCACCTTGTTTGTTT
TTCTGATTATGCTTTCTGTTTTTTATTTTAAAGAAGTGCTGGACTATAAGTTCCGCTTAAAGCGTTTCTCAGAAAAGTAT
AATTATCAAGACAGTATTTTTAAATACACACAATTGATTAAAAGTGTGTCAGTCTTGAACCAAGTTTTCACACATCTTAA
AGCGACAATTTTAGATGTTTTGCCAGTAAGCAAAGCTTATATTTTTGAAATTAGTTCTGGCGGAGAAATTGTGTATTTTG
ACAAACAAAGTACAGAACCAAATTGGTATCCCTATAAAGACAAATTTGAAAAGGTCAATTCGGAAATCGGCAAAATCATT
GAGATTAATCAAGGGTTCCTCATGAAAATTGGCGAGAGAGGAACAAGTTCTTATGTTTTGCTTTGTTTATCAAGCATAAA
TACACCAAGACTTACAATGGATGAGACTTCATGGCTGAAGACGTTATCATTTTATACCAGTGTATCGATGGAAAATGTTC
TGCAAATTGAGGAACTTATGGATCACCTCCAAAATCTAAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATG
TTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAA
GCGCCAGTGTGAGCTGTTTCTGGCAGATTTTAAGAAAGAAGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGA
TGAATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTGCGTCCTCAGCTGCTGTATGATTTG
GGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCG
GTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGC
ATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTC
GGCTGCAATCAGGAAAAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGA
CGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGTAGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(568-637)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

60.052

100

0.603


Multiple sequence alignment