NT genes of 'Aggregatibacter actinomycetemcomitans strain 5R'


In this species, transformation by exogenous DNA is regulated by the presence of a specific Uptake Signal Sequence (USS) (PMID: 17038178).
Evidence:

Gene name Gene type Function Related MGE Organism Genome accession Locus tag Protein ID
insolico pilF/pilF2 Machinery gene DNA binding and uptake - Aggregatibacter actinomycetemcomitans strain 5R NZ_CP085095 LIN97_RS00310 WP_005547469.1
insolico pilA Machinery gene DNA binding and uptake - Aggregatibacter actinomycetemcomitans strain 5R NZ_CP085095 LIN97_RS00510 WP_005586498.1
insolico pilB Machinery gene DNA binding and uptake - Aggregatibacter actinomycetemcomitans strain 5R NZ_CP085095 LIN97_RS00515 WP_005567970.1
insolico pilC Machinery gene DNA binding and uptake - Aggregatibacter actinomycetemcomitans strain 5R NZ_CP085095 LIN97_RS00520 WP_005567968.1
insolico ssb Machinery gene DNA processing - Aggregatibacter actinomycetemcomitans strain 5R NZ_CP085095 LIN97_RS02050 WP_005544986.1
insolico comE Machinery gene DNA binding and uptake - Aggregatibacter actinomycetemcomitans strain 5R NZ_CP085095 LIN97_RS02070 WP_005566816.1
insolico dprA Machinery gene DNA processing - Aggregatibacter actinomycetemcomitans strain 5R NZ_CP085095 LIN97_RS02340 WP_005567106.1
insolico recA Machinery gene Homologous recombination - Aggregatibacter actinomycetemcomitans strain 5R NZ_CP085095 LIN97_RS02890 WP_005544399.1
insolico comM Machinery gene Involve in natural transformation - Aggregatibacter actinomycetemcomitans strain 5R NZ_CP085095 LIN97_RS03460 WP_005575487.1
insolico ssb Machinery gene DNA processing Genomic island Aggregatibacter actinomycetemcomitans strain 5R NZ_CP085095 LIN97_RS05460 WP_148325676.1
insolico rec2 Machinery gene DNA binding and uptake - Aggregatibacter actinomycetemcomitans strain 5R NZ_CP085095 LIN97_RS07040 WP_249849251.1
insolico comE1/comEA Machinery gene DNA binding and uptake - Aggregatibacter actinomycetemcomitans strain 5R NZ_CP085095 LIN97_RS08445 WP_005548420.1
insolico comQ Machinery gene DNA binding and uptake - Aggregatibacter actinomycetemcomitans strain 5R NZ_CP085095 LIN97_RS10150 WP_233115293.1

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    experimental Experimentally validated     insolico Bioinformatically predicted