TAfinder detailed results

Overview

Job ID wrVbGpMxFf
Sequence name NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome
Predicted type II

Orphan Antitoxin (Protein)


Predicted family vapB (AT4250) Predicted domain COG3905 (RHH)
Locus tag orf4329 Length 72 a.a.
Coordinates 4633962..4634180 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
orf4316 4629373..4630275 + 903 ORF4316 Predicted ORF by PRODIGAL Version 1.20 -
orf4317 4630272..4630907 + 636 ORF4317 Predicted ORF by PRODIGAL Version 1.20 -
orf4318 4630904..4631833 + 930 ORF4318 Predicted ORF by PRODIGAL Version 1.20 -
orf4319 4632053..4632163 - 111 ORF4319 Predicted ORF by PRODIGAL Version 1.20 -
orf4320 4632196..4633404 - 1209 ORF4320 Predicted ORF by PRODIGAL Version 1.20 -
orf4321 4633474..4633743 - 270 ORF4321 Predicted ORF by PRODIGAL Version 1.20 -
orf4322 4633962..4634180 - 219 ORF4322 Predicted ORF by PRODIGAL Version 1.20 Antitoxin
orf4323 4634607..4634699 - 93 ORF4323 Predicted ORF by PRODIGAL Version 1.20 -
orf4324 4634785..4635075 - 291 ORF4324 Predicted ORF by PRODIGAL Version 1.20 -
orf4325 4635076..4635387 - 312 ORF4325 Predicted ORF by PRODIGAL Version 1.20 -
orf4326 4635616..4636524 + 909 ORF4326 Predicted ORF by PRODIGAL Version 1.20 -
orf4327 4636588..4637529 - 942 ORF4327 Predicted ORF by PRODIGAL Version 1.20 -
orf4328 4637574..4638011 - 438 ORF4328 Predicted ORF by PRODIGAL Version 1.20 -
orf4329 4638008..4638880 - 873 ORF4329 Predicted ORF by PRODIGAL Version 1.20 -

Domains

The domains were predicted by HMMER and were sorted by score.

Orphan Antitoxin


No domain identified.



Sequences

Orphan Antitoxin        


Download         Length:         Molecular weight: 8407.73 Da        Isoelectric Point: 10.6107

>ORF4322 Orphan_TA_105 Antitoxin
MAMNTVFLHLSEEAIKRLNKLRGWRKVSRSAILREAVEQYLERQQFPVRKAKGGRQKGEV
VGVDDQCKEHKE

Download         Length: 219 bp

>ORF4322 Orphan_TA_105 Antitoxin
TCATTCCTTATGCTCCTTACACTGATCATCAACACCAACTACCTCCCCCTTTTGCCTGCC
TCCCTTTGCTTTACGCACCGGAAATTGCTGCCGCTCCAGATATTGCTCAACCGCTTCGCG
TAAAATTGCAGATCGTGAAACCTTACGCCAGCCCCGAAGTTTGTTCAGCCGTTTAATTGC
CTCTTCTGATAAATGAAGAAAAACCGTATTCATCGCCAT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
AT4250 Klebsiella pneumoniae subsp. pneumoniae MGH 78578

50

52.5

0.292
AT180 Pseudomonas aeruginosa PAO1

35.849

70.667

0.264
AT6134 Paracoccus aminophilus

30

45.977

0.167
AT309 Pseudomonas putida KT2440

41.379

32.222

0.167