TAfinder detailed results

Overview

Job ID wrVbGpMxFf
Sequence name NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome
Predicted type II

Orphan Antitoxin (Protein)


Predicted family vapB (AT4250) Predicted domain -
Locus tag orf4328 Length 89 a.a.
Coordinates 4633474..4633743 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
orf4316 4629373..4630275 + 903 ORF4316 Predicted ORF by PRODIGAL Version 1.20 -
orf4317 4630272..4630907 + 636 ORF4317 Predicted ORF by PRODIGAL Version 1.20 -
orf4318 4630904..4631833 + 930 ORF4318 Predicted ORF by PRODIGAL Version 1.20 -
orf4319 4632053..4632163 - 111 ORF4319 Predicted ORF by PRODIGAL Version 1.20 -
orf4320 4632196..4633404 - 1209 ORF4320 Predicted ORF by PRODIGAL Version 1.20 -
orf4321 4633474..4633743 - 270 ORF4321 Predicted ORF by PRODIGAL Version 1.20 Antitoxin
orf4322 4633962..4634180 - 219 ORF4322 Predicted ORF by PRODIGAL Version 1.20 -
orf4323 4634607..4634699 - 93 ORF4323 Predicted ORF by PRODIGAL Version 1.20 -
orf4324 4634785..4635075 - 291 ORF4324 Predicted ORF by PRODIGAL Version 1.20 -
orf4325 4635076..4635387 - 312 ORF4325 Predicted ORF by PRODIGAL Version 1.20 -
orf4326 4635616..4636524 + 909 ORF4326 Predicted ORF by PRODIGAL Version 1.20 -
orf4327 4636588..4637529 - 942 ORF4327 Predicted ORF by PRODIGAL Version 1.20 -
orf4328 4637574..4638011 - 438 ORF4328 Predicted ORF by PRODIGAL Version 1.20 -

Domains

The domains were predicted by HMMER and were sorted by score.

Orphan Antitoxin


No domain identified.



Sequences

Orphan Antitoxin        


Download         Length:         Molecular weight: 10218.35 Da        Isoelectric Point: 4.2336

>ORF4321 Orphan_TA_104 Antitoxin
MNSLAGIDMGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQSQTARTSVPG
IWQGCEEDGVEYQRKLRADESPNDFYQNH

Download         Length: 270 bp

>ORF4321 Orphan_TA_104 Antitoxin
TTAATGATTTTGATAAAAATCATTAGGGGATTCATCAGCGCGCAGCTTACGCTGATATTC
GACACCATCTTCCTCACACCCTTGCCAGATGCCAGGAACACTGGTTCTTGCTGTTTGCGA
TTGATTTATCAGGTATTGATCTACCGCTTCCCTTAATAGGTCCGCACGAGGAAGATTACG
CTGCACCTCGAGATCATCAAGTTGCTTAATCACCTCATTCGATAAATCGAGTAAAATTCT
GCCCATATCTATACCTGCCAGAGAGTTCAT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
AT4250 Klebsiella pneumoniae subsp. pneumoniae MGH 78578

64.103

97.5

0.562
AT116 Mycobacterium tuberculosis H37Rv

26.027

85.882

0.213
AT10191 Synechococcus sp. CB0101

33.333

46.988

0.146
AT85 Mycobacterium tuberculosis H37Rv

32.5

47.619

0.146