MGE detailed information
MGE type: Mobilizable plasmid MGE length: 66803 bp
Accession: NZ_OU342920 Location: 1..66803 Organism: Escherichia coli isolate UR21/11-869 Replicon: plasmid 2
Accession: NZ_OU342920 Location: 1..66803 Organism: Escherichia coli isolate UR21/11-869 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LIX80_RS24060 (263) | 263..515 | + | 253 | Protein_1 | hypothetical protein | - |
| LIX80_RS24065 (719) | 719..995 | - | 277 | Protein_2 | IS3 family transposase IS1351 | Transposase |
| LIX80_RS24070 (1701) | 1701..2024 | - | 324 | WP_264180241.1 | AraC family transcriptional regulator | - |
| LIX80_RS24075 (2553) | 2553..3586 | - | 1034 | Protein_4 | IS3 family transposase | - |
| LIX80_RS24080 (3987) | 3987..5001 | + | 1015 | Protein_5 | integrase core domain-containing protein | - |
| LIX80_RS24090 (5802) | 5802..6749 | + | 948 | WP_001253824.1 | DMT family transporter | - |
| LIX80_RS24095 (7090) | 7090..7245 | + | 156 | Protein_7 | IS110 family transposase | - |
| LIX80_RS24100 (7641) | 7641..7892 | - | 252 | WP_001315600.1 | HTH domain-containing protein | - |
| LIX80_RS24105 (9242) | 9242..10099 | - | 858 | WP_000131011.1 | incFII family plasmid replication initiator RepA | - |
| LIX80_RS24110 (10092) | 10092..10166 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| LIX80_RS24115 (10215) | 10215..10340 | + | 126 | WP_071590472.1 | replication protein RepA | - |
| LIX80_RS24120 (10413) | 10413..10661 | - | 249 | WP_000083838.1 | replication regulatory protein RepA | - |
| LIX80_RS24125 (10945) | 10945..11094 | - | 150 | WP_001300273.1 | Hok/Gef family protein | Toxin Detail |
| - (11138) | 11138..11199 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (11138) | 11138..11199 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (11138) | 11138..11199 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (11138) | 11138..11199 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| LIX80_RS24130 (11859) | 11859..12320 | - | 462 | WP_000760077.1 | thermonuclease family protein | - |
| LIX80_RS24135 (13063) | 13063..13266 | - | 204 | WP_001327131.1 | hypothetical protein | - |
| LIX80_RS24140 (13421) | 13421..13978 | - | 558 | WP_000139319.1 | fertility inhibition protein FinO | - |
| LIX80_RS24145 (14081) | 14081..14941 | - | 861 | WP_000704512.1 | Quorum-quenching protein AidA | VF |
| LIX80_RS24150 (15000) | 15000..15746 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| LIX80_RS24155 (15766) | 15766..16359 | - | 594 | Protein_19 | conjugative transfer relaxase/helicase TraI | - |
| LIX80_RS24165 (17618) | 17618..18865 | - | 1248 | Protein_21 | Multifunctional conjugation protein TraI | Relaxase |
| LIX80_RS24170 (18865) | 18865..19125 | - | 261 | Protein_22 | conjugal transfer protein TraB | - |
| LIX80_RS24175 (19124) | 19124..19309 | - | 186 | Protein_23 | type-F conjugative transfer system secretin TraK | - |
| LIX80_RS24180 (19353) | 19353..19919 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| LIX80_RS24185 (19941) | 19941..20252 | - | 312 | WP_000012110.1 | type IV conjugative transfer system protein TraL | - |
| LIX80_RS24190 (20267) | 20267..20632 | - | 366 | WP_000340267.1 | type IV conjugative transfer system pilin TraA | - |
| LIX80_RS24195 (20666) | 20666..20893 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| LIX80_RS24200 (20987) | 20987..21673 | - | 687 | WP_000332492.1 | PAS domain-containing protein | - |
| LIX80_RS24205 (21863) | 21863..22246 | - | 384 | WP_000124980.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LIX80_RS24210 (22568) | 22568..23170 | + | 603 | WP_000243717.1 | hypothetical protein | VF |
| LIX80_RS24215 (23465) | 23465..24286 | - | 822 | WP_001234477.1 | DUF932 domain-containing protein | - |
| LIX80_RS24220 (24403) | 24403..24690 | - | 288 | WP_000107547.1 | hypothetical protein | - |
| LIX80_RS24225 (24990) | 24990..25296 | + | 307 | Protein_33 | hypothetical protein | - |
| LIX80_RS24230 (25589) | 25589..25708 | - | 120 | WP_229484968.1 | Hok/Gef family protein | Toxin Detail |
| LIX80_RS24235 (25656) | 25656..25808 | - | 153 | Protein_35 | FlmC family protein | - |
| - (25796) | 25796..26012 | - | 217 | NuclAT_0 | - | Antitoxin Detail |
| - (25796) | 25796..26012 | - | 217 | NuclAT_0 | - | Antitoxin Detail |
| - (25796) | 25796..26012 | - | 217 | NuclAT_0 | - | Antitoxin Detail |
| - (25796) | 25796..26012 | - | 217 | NuclAT_0 | - | Antitoxin Detail |
| LIX80_RS24240 (25981) | 25981..26743 | - | 763 | Protein_36 | plasmid SOS inhibition protein A | - |
| LIX80_RS24245 (26740) | 26740..27147 | - | 408 | WP_001261250.1 | conjugation system SOS inhibitor PsiB | - |
| LIX80_RS24250 (27308) | 27308..27487 | + | 180 | WP_000618107.1 | hypothetical protein | - |
| LIX80_RS24255 (27571) | 27571..27963 | - | 393 | WP_000272016.1 | plasmid partitioning/stability family protein | - |
| LIX80_RS24260 (27967) | 27967..28941 | - | 975 | WP_021534625.1 | plasmid segregation protein ParM | - |
| LIX80_RS24265 (29181) | 29181..29555 | - | 375 | WP_000752650.1 | hypothetical protein | - |
| LIX80_RS24270 (29555) | 29555..30187 | - | 633 | WP_000312330.1 | ParA family protein | - |
| LIX80_RS24275 (31035) | 31035..31790 | - | 756 | WP_000807693.1 | replication initiation protein RepE | - |
| LIX80_RS24280 (32347) | 32347..32997 | - | 651 | Protein_44 | site-specific integrase | - |
| LIX80_RS24285 (33046) | 33046..33409 | + | 364 | Protein_45 | zinc ribbon domain-containing protein | - |
| LIX80_RS24290 (33423) | 33423..33491 | - | 69 | WP_211180522.1 | protein YkiE | - |
| LIX80_RS24295 (33628) | 33628..34149 | + | 522 | WP_001283623.1 | putative RNA polymerase sigma factor FecI | VF |
| LIX80_RS24300 (34146) | 34146..35099 | + | 954 | WP_001068902.1 | ferric citrate uptake sigma factor regulator FecR | - |
| LIX80_RS24305 (35186) | 35186..37510 | + | 2325 | WP_021534628.1 | TonB-dependent Fe(3+) dicitrate receptor FecA | - |
| LIX80_RS24310 (37555) | 37555..37642 | + | 88 | Protein_50 | hypothetical protein | - |
| LIX80_RS24315 (37713) | 37713..37985 | + | 273 | WP_000019163.1 | hypothetical protein | - |
| LIX80_RS24320 (37966) | 37966..38616 | + | 651 | Protein_52 | IS91 family transposase ISSbo1 | Transposase |
| LIX80_RS24325 (38675) | 38675..38892 | - | 218 | Protein_53 | transposase | - |
| LIX80_RS24330 (38893) | 38893..39423 | - | 531 | WP_000348884.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LIX80_RS24335 (39427) | 39427..39696 | - | 270 | WP_001275013.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LIX80_RS24340 (40584) | 40584..41574 | + | 991 | Protein_56 | RepB family plasmid replication initiator protein | - |
| LIX80_RS24345 (41857) | 41857..42597 | - | 741 | WP_021534629.1 | tyrosine-type recombinase/integrase | - |
| LIX80_RS24350 (42718) | 42718..42852 | - | 135 | Protein_58 | serine/threonine protein kinase | - |
| LIX80_RS24355 (43349) | 43349..44821 | - | 1473 | WP_226397359.1 | alpha/beta hydrolase | - |
| LIX80_RS24360 (44941) | 44941..45888 | - | 948 | WP_137530487.1 | Outer membrane protease OmpP | VF |
| LIX80_RS24365 (47141) | 47141..48361 | + | 1221 | WP_000040078.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| LIX80_RS24370 (48396) | 48396..50257 | + | 1862 | Protein_62 | putative autotransporter | VF |
| LIX80_RS24375 (50319) | 50319..53216 | + | 2898 | WP_226397360.1 | putative autotransporter | VF |
| LIX80_RS24380 (53524) | 53524..53793 | + | 270 | WP_000976359.1 | hypothetical protein | - |
| LIX80_RS24385 (53968) | 53968..54244 | - | 277 | Protein_65 | IS3 family transposase IS1351 | Transposase |
| LIX80_RS24390 (54652) | 54652..55488 | - | 837 | WP_021534617.1 | Right origin-binding protein | VF |
| LIX80_RS24395 (55803) | 55803..56834 | - | 1032 | Protein_67 | IS3 family transposase | - |
| LIX80_RS24400 (57235) | 57235..58249 | + | 1015 | Protein_68 | integrase core domain-containing protein | - |
| LIX80_RS24410 (59050) | 59050..59997 | + | 948 | WP_001253824.1 | DMT family transporter | - |
| LIX80_RS24415 (60338) | 60338..60493 | + | 156 | Protein_70 | IS110 family transposase | - |
| LIX80_RS24420 (60889) | 60889..61140 | - | 252 | WP_001315600.1 | HTH domain-containing protein | - |
| LIX80_RS24425 (62491) | 62491..63348 | - | 858 | WP_000131011.1 | incFII family plasmid replication initiator RepA | - |
| LIX80_RS24430 (63341) | 63341..63415 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| LIX80_RS24435 (63464) | 63464..63589 | + | 126 | WP_071590472.1 | replication protein RepA | - |
| LIX80_RS24440 (63666) | 63666..63911 | - | 246 | WP_226397356.1 | replication regulatory protein RepA | - |
| LIX80_RS24445 (64195) | 64195..64344 | - | 150 | WP_001300273.1 | Hok/Gef family protein | Toxin Detail |
| - (64388) | 64388..64449 | + | 62 | NuclAT_2 | - | Antitoxin Detail |
| - (64388) | 64388..64449 | + | 62 | NuclAT_2 | - | Antitoxin Detail |
| - (64388) | 64388..64449 | + | 62 | NuclAT_2 | - | Antitoxin Detail |
| - (64388) | 64388..64449 | + | 62 | NuclAT_2 | - | Antitoxin Detail |
| LIX80_RS24450 (65109) | 65109..65560 | - | 452 | Protein_77 | thermonuclease family protein | - |
| LIX80_RS24455 (66337) | 66337..66531 | - | 195 | WP_226397357.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|