MGE detailed information
MGE type: Prophage MGE length: 8652 bp
Accession: NZ_OU015340 Location: 3591131..3599782 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00027944 isolate AUSMDU00027944 Replicon: chromosome
Accession: NZ_OU015340 Location: 3591131..3599782 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00027944 isolate AUSMDU00027944 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KKR00_RS18090 (3586936) | 3586936..3588039 | + | 1104 | WP_001521443.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| KKR00_RS18095 (3588122) | 3588122..3588256 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| KKR00_RS18100 (3588234) | 3588234..3588617 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| KKR00_RS18105 (3589039) | 3589039..3590148 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| KKR00_RS18110 (3590208) | 3590208..3591134 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| KKR00_RS18115 (3591131) | 3591131..3592408 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| KKR00_RS18120 (3592405) | 3592405..3593172 | + | 768 | WP_000082083.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| KKR00_RS18125 (3593174) | 3593174..3593887 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| KKR00_RS18130 (3594019) | 3594019..3594240 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| KKR00_RS18135 (3594237) | 3594237..3594605 | + | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| KKR00_RS18140 (3594864) | 3594864..3596180 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| KKR00_RS18145 (3596244) | 3596244..3597131 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| KKR00_RS18150 (3597128) | 3597128..3597973 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| KKR00_RS18155 (3597975) | 3597975..3599045 | + | 1071 | WP_000907838.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| KKR00_RS18160 (3599042) | 3599042..3599782 | + | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| KKR00_RS18165 (3599795) | 3599795..3600211 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| KKR00_RS18170 (3600337) | 3600337..3602079 | + | 1743 | WP_000805096.1 | gamma-glutamyltransferase | - |
| KKR00_RS18175 (3602124) | 3602124..3603158 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| KKR00_RS18180 (3603155) | 3603155..3604126 | - | 972 | WP_001038948.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0 |