MGE detailed information
MGE type: Prophage MGE length: 8652 bp
Accession: NZ_OU015323 Location: 3566987..3575638 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00004549 isolate AUSMDU00004549 Replicon: chromosome
Accession: NZ_OU015323 Location: 3566987..3575638 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00004549 isolate AUSMDU00004549 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KKQ99_RS17975 (3562792) | 3562792..3563895 | + | 1104 | WP_001521443.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| KKQ99_RS17980 (3563978) | 3563978..3564112 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| KKQ99_RS17985 (3564090) | 3564090..3564473 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| KKQ99_RS17990 (3564895) | 3564895..3566004 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| KKQ99_RS17995 (3566064) | 3566064..3566990 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| KKQ99_RS18000 (3566987) | 3566987..3568264 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| KKQ99_RS18005 (3568261) | 3568261..3569028 | + | 768 | WP_000082083.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| KKQ99_RS18010 (3569030) | 3569030..3569743 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| KKQ99_RS18015 (3569875) | 3569875..3570096 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| KKQ99_RS18020 (3570093) | 3570093..3570461 | + | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| KKQ99_RS18025 (3570720) | 3570720..3572036 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| KKQ99_RS18030 (3572100) | 3572100..3572987 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| KKQ99_RS18035 (3572984) | 3572984..3573829 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| KKQ99_RS18040 (3573831) | 3573831..3574901 | + | 1071 | WP_000907838.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| KKQ99_RS18045 (3574898) | 3574898..3575638 | + | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| KKQ99_RS18050 (3575651) | 3575651..3576067 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| KKQ99_RS18055 (3576193) | 3576193..3577935 | + | 1743 | WP_000805096.1 | gamma-glutamyltransferase | - |
| KKQ99_RS18060 (3577980) | 3577980..3579014 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| KKQ99_RS18065 (3579011) | 3579011..3579982 | - | 972 | WP_001038948.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0 |