NZ_LS9921811..149633

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 149633 bp
Accession: NZ_LS992181        Location: 1..149633         Organism: Escherichia coli isolate Escherichia coli str. TO124       Replicon: plasmid 2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
ECTO124_RS25615 () 30..718 - 689 Protein_0 hypothetical protein -
ECTO124_RS25620 () 763..1198 - 436 Protein_1 DUF1380 family protein -
ECTO124_RS25625 () 1212..1433 - 222 WP_001104892.1 hypothetical protein -
ECTO124_RS25630 () 1434..2119 - 686 Protein_3 DNA methylase -
ECTO124_RS25635 () 2199..2508 - 310 Protein_4 hypothetical protein -
ECTO124_RS25640 () 2534..2739 - 206 Protein_5 DUF1281 domain-containing protein -
ECTO124_RS27635 () 2941..3082 - 142 Protein_6 DUF1281 domain-containing protein -
ECTO124_RS25650 () 3063..3119 + 57 WP_134087824.1 DUF4113 domain-containing protein -
ECTO124_RS25655 () 3248..4023 - 776 Protein_8 hypothetical protein -
ECTO124_RS25660 () 4255..5154 - 900 Protein_9 ParB/RepB/Spo0J family partition protein -
ECTO124_RS25665 () 5210..6353 - 1144 Protein_10 Plasmid partition protein A VF
ECTO124_RS25675 () 7173..7424 + 252 WP_001132895.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
ECTO124_RS25680 () 7421..7708 + 288 WP_001270422.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
ECTO124_RS25685 () 7710..8121 + 412 Protein_13 DDE-type integrase/transposase/recombinase -
ECTO124_RS25695 () 8765..9742 + 978 WP_001309253.1 RepB family plasmid replication initiator protein -
ECTO124_RS25700 () 9985..10725 - 741 WP_001066947.1 IS91 family transposase ISMno23 Transposase
ECTO124_RS25705 () 10846..11034 - 189 WP_001332784.1 hypothetical protein -
ECTO124_RS25710 () 11401..12570 + 1170 WP_001072358.1 hypothetical protein -
ECTO124_RS25715 () 12796..12971 - 176 Protein_18 IS3 family transposase -
ECTO124_RS25720 () 13417..13689 - 273 WP_001322642.1 adhesin biosynthesis transcription regulatory family protein -
ECTO124_RS25725 () 14214..14650 - 437 Protein_20 IS3 family transposase IS2 Transposase
ECTO124_RS25730 () 14740..15213 - 474 Protein_21 IS3 family transposase IS629 Transposase
ECTO124_RS25735 () 15303..16811 - 1509 WP_001189111.1 group II intron reverse transcriptase/maturase -
ECTO124_RS25745 () 17484..18223 - 740 Protein_23 IS3 family transposase IS629 Transposase
ECTO124_RS25750 () 18325..18585 + 261 WP_000371883.1 hypothetical protein -
ECTO124_RS25755 () 18582..19091 + 510 WP_000194542.1 hypothetical protein -
ECTO124_RS25760 () 19111..19458 - 348 WP_000142452.1 hypothetical protein -
ECTO124_RS25765 () 19587..19805 + 219 WP_001336934.1 hypothetical protein -
ECTO124_RS25785 () 21375..22061 + 687 Protein_28 primase alpha helix C-terminal domain-containing protein -
ECTO124_RS25790 () 22393..23268 + 876 WP_001537591.1 ChaN family lipoprotein -
ECTO124_RS25795 () 23276..24052 + 777 WP_000981091.1 energy transducer TonB -
ECTO124_RS25800 () 24221..26482 + 2262 WP_001100763.1 TonB-dependent receptor -
ECTO124_RS25810 () 26551..27726 + 1176 WP_001020413.1 putative protein YncE VF
ECTO124_RS25815 () 28249..28554 - 306 Protein_33 IS91 family transposase ISSbo1 Transposase
ECTO124_RS25820 () 28580..29157 + 578 Protein_34 IS3 family transposase IS629 Transposase
ECTO124_RS25825 () 29048..29803 - 756 WP_000065240.1 IS21 family transposase ISEc10 Transposase
ECTO124_RS25830 () 29800..31299 - 1500 WP_000143800.1 IS21 family transposase ISEc10 Transposase
ECTO124_RS25835 () 31385..31735 + 351 Protein_37 IS3 family transposase IS629 Transposase
ECTO124_RS25845 () 32408..33916 + 1509 WP_032145081.1 group II intron reverse transcriptase/maturase -
ECTO124_RS25850 () 34145..35179 - 1035 Protein_39 IS3 family transposase IS3 Transposase
ECTO124_RS25855 () 35295..35699 + 405 WP_000839179.1 IS66 family transposase ISEc22 Transposase
ECTO124_RS25860 () 35696..36043 + 348 WP_000612626.1 IS66 family transposase ISKpn24 Transposase
ECTO124_RS25865 () 36092..37630 + 1539 WP_000099150.1 IS66 family transposase ISEc22 Transposase
ECTO124_RS25870 () 37669..37818 + 150 Protein_43 IS3 family transposase -
ECTO124_RS25875 () 37934..38782 + 849 WP_001057995.1 3'-5' exonuclease -
ECTO124_RS25880 () 38899..39381 + 483 WP_001337004.1 hypothetical protein -
ECTO124_RS25885 () 39591..39851 + 261 WP_001545316.1 hypothetical protein -
ECTO124_RS25890 () 39958..40221 + 264 WP_001089474.1 hypothetical protein -
ECTO124_RS25895 () 40211..40510 + 300 WP_000119542.1 type II toxin-antitoxin system RelE/ParE family toxin -
ECTO124_RS25900 () 40868..41143 + 276 WP_000877662.1 bacteriocin immunity protein -
ECTO124_RS25905 () 41221..42408 - 1188 WP_025999368.1 MFS transporter -
ECTO124_RS25910 () 42465..43226 - 762 WP_000020504.1 Fe(3+) dicitrate transport ATP-binding protein FecE VF
ECTO124_RS25915 () 43226..44263 - 1038 WP_001545318.1 Hemin transport system permease protein HmuU VF
ECTO124_RS25920 () 44263..45261 - 999 WP_000756334.1 ABC transporter substrate-binding protein -
ECTO124_RS25925 () 45411..45524 - 114 Protein_54 integrase core domain-containing protein -
ECTO124_RS25930 () 45517..46022 - 506 Protein_55 IS3 family transposase IS3H Transposase
ECTO124_RS25935 () 46347..47138 + 792 WP_000456855.1 Virulence regulon transcriptional activator VirF VF
ECTO124_RS25940 () 47343..47759 - 417 WP_000466682.1 SdiA-regulated domain-containing protein -
ECTO124_RS25945 () 47971..49199 + 1229 WP_106378881.1 IS3 family transposase IS2 Transposase
ECTO124_RS25950 () 49497..49982 - 486 WP_001545321.1 Dr family adhesin structural subunit -
ECTO124_RS25955 () 50090..50512 - 423 WP_000243157.1 Protein AfaD VF
ECTO124_RS25960 () 50528..53044 - 2517 WP_162929852.1 F1 capsule-anchoring protein VF
ECTO124_RS25965 () 53107..53859 - 753 WP_000471454.1 Chaperone protein caf1M VF
ECTO124_RS25975 () 54342..54590 + 249 Protein_63 IS21 family transposase IS21 Transposase
ECTO124_RS25980 () 54645..55384 + 740 Protein_64 IS3 family transposase IS629 Transposase
ECTO124_RS25990 () 56057..57565 + 1509 WP_001189111.1 group II intron reverse transcriptase/maturase -
ECTO124_RS25995 () 57655..58128 + 474 Protein_66 IS3 family transposase IS629 Transposase
ECTO124_RS26000 () 58131..58700 - 570 WP_001336919.1 Serine protease EspC VF
ECTO124_RS26005 () 58802..59781 + 980 Protein_68 IS5 family transposase ISKpn26 Transposase
ECTO124_RS26010 () 59931..60563 - 633 Protein_69 histidine-type phosphatase -
ECTO124_RS26015 () 60685..61170 - 486 WP_000874189.1 hypothetical protein -
ECTO124_RS26020 () 61195..61680 - 486 WP_001267176.1 TlpA family protein disulfide reductase -
ECTO124_RS26025 () 61667..62362 - 696 WP_000117262.1 Lipoprotein-releasing system ATP-binding protein LolD VF
ECTO124_RS26030 () 62367..63497 - 1131 WP_000729218.1 ABC transporter permease -
ECTO124_RS26035 () 63487..64770 - 1284 WP_000964653.1 ABC transporter permease -
ECTO124_RS26040 () 64773..66152 - 1380 WP_000119836.1 DUF2318 domain-containing protein -
ECTO124_RS26045 () 66256..66783 - 528 WP_000178050.1 iron transporter -
ECTO124_RS26050 () 66824..68710 - 1887 WP_001332815.1 FTR1 family iron permease -
ECTO124_RS26060 () 69057..69872 - 816 WP_012372823.1 Na(+)-translocating NADH-quinone reductase subunit C -
ECTO124_RS26065 () 70205..70909 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
ECTO124_RS26070 () 70963..71130 + 168 Protein_80 IS110 family transposase -
ECTO124_RS26075 () 71508..72980 - 1473 WP_000621194.1 sensor histidine kinase -
ECTO124_RS26080 () 72977..73699 - 723 WP_001057737.1 Transcriptional regulatory protein WalR VF
ECTO124_RS26085 () 73841..74440 + 600 WP_001177183.1 cytochrome b/b6 domain-containing protein -
ECTO124_RS26090 () 74451..75221 + 771 WP_000712166.1 molybdopterin-dependent oxidoreductase -
ECTO124_RS26095 () 75251..75499 + 249 WP_000738203.1 hypothetical protein -
ECTO124_RS27770 () 75649..75747 - 99 WP_137491101.1 transposase -
ECTO124_RS26105 () 75940..76248 + 309 Protein_87 IS91 family transposase ISSbo1 Transposase
ECTO124_RS26110 () 76363..76575 - 213 WP_001336932.1 hypothetical protein -
ECTO124_RS26120 () 77276..78133 - 858 WP_001537577.1 incFII family plasmid replication initiator RepA -
ECTO124_RS26125 () 78126..78200 - 75 WP_001365705.1 RepA leader peptide Tap -
ECTO124_RS26135 () 78434..78691 - 258 WP_000084404.1 replication regulatory protein RepA -
ECTO124_RS26140 () 78976..79125 - 150 WP_001336447.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 79173..79229 + 57 NuclAT_1 - Antitoxin Detail
- () 79173..79229 + 57 NuclAT_1 - Antitoxin Detail
- () 79173..79229 + 57 NuclAT_1 - Antitoxin Detail
- () 79173..79229 + 57 NuclAT_1 - Antitoxin Detail
ECTO124_RS26150 () 79324..79761 - 438 WP_000872609.1 hypothetical protein -
ECTO124_RS26155 () 79914..80297 - 384 WP_001109264.1 hypothetical protein -
ECTO124_RS26160 () 80400..80861 - 462 WP_000760080.1 thermonuclease family protein -
ECTO124_RS26165 () 81614..81817 - 204 WP_001336517.1 hypothetical protein -
ECTO124_RS26170 () 81969..82526 - 558 WP_000139329.1 fertility inhibition protein FinO -
ECTO124_RS26175 () 82581..83327 - 747 WP_000205709.1 conjugal transfer pilus acetylase TraX -
ECTO124_RS26180 () 83347..88617 - 5271 WP_001550317.1 Multifunctional conjugation protein TraI Relaxase
ECTO124_RS26185 () 88617..90896 - 2280 WP_134087822.1 Coupling protein TraD VF
ECTO124_RS26190 () 90947..91489 - 543 WP_077784345.1 hypothetical protein -
ECTO124_RS26195 () 91659..93230 - 1572 WP_000381395.1 IS66 family transposase ISCro1 Transposase
ECTO124_RS26200 () 93250..93597 - 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
ECTO124_RS26205 () 93597..94274 - 678 WP_032147602.1 IS66 family transposase ISCro1 Transposase
ECTO124_RS26210 () 94594..95325 - 732 WP_000850422.1 complement resistance protein TraT -
ECTO124_RS26215 () 95357..95854 - 498 WP_000605862.1 entry exclusion protein -
ECTO124_RS26220 () 95873..98692 - 2820 WP_001537571.1 conjugal transfer mating pair stabilization protein TraG -
ECTO124_RS26225 () 98689..100062 - 1374 WP_000944331.1 conjugal transfer protein TraH -
ECTO124_RS26230 () 100049..100474 - 426 WP_001336804.1 F-type conjugal transfer protein TrbF -
ECTO124_RS26235 () 100395..100769 - 375 WP_071586940.1 P-type conjugative transfer protein TrbJ -
ECTO124_RS26240 () 100699..101244 - 546 WP_000059830.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
ECTO124_RS26245 () 101231..101515 - 285 WP_000624194.1 type-F conjugative transfer system pilin chaperone TraQ -
ECTO124_RS26250 () 101596..101856 + 261 WP_000736412.1 hypothetical protein -
ECTO124_RS26255 () 101912..102253 - 342 WP_000556795.1 conjugal transfer protein TrbA -
ECTO124_RS26260 () 102267..103010 - 744 WP_001030371.1 type-F conjugative transfer system pilin assembly protein TraF -
ECTO124_RS26265 () 103003..103260 - 258 WP_000864310.1 conjugal transfer protein TrbE -
ECTO124_RS26270 () 103287..105137 - 1851 WP_000826177.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
ECTO124_RS26275 () 105134..105556 - 423 WP_001229309.1 HNH endonuclease -
ECTO124_RS26280 () 105581..105952 - 372 WP_000174465.1 hypothetical protein -
ECTO124_RS26285 () 105949..106587 - 639 WP_000087539.1 type-F conjugative transfer system pilin assembly protein TrbC -
ECTO124_RS26290 () 106614..107132 - 519 WP_000009088.1 hypothetical protein -
ECTO124_RS26295 () 107195..107503 - 309 WP_000412445.1 hypothetical protein -
ECTO124_RS26300 () 107530..108522 - 993 WP_000830838.1 conjugal transfer pilus assembly protein TraU -
ECTO124_RS26305 () 108519..109151 - 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
ECTO124_RS26310 () 109148..109534 - 387 WP_000214084.1 type-F conjugative transfer system protein TrbI -
ECTO124_RS26315 () 109531..112161 - 2631 WP_000069771.1 type IV secretion system protein TraC -
ECTO124_RS26330 () 112826..113299 - 474 WP_000549566.1 hypothetical protein -
ECTO124_RS26335 () 113292..113705 - 414 WP_000549574.1 hypothetical protein -
ECTO124_RS26340 () 113698..113919 - 222 WP_001278695.1 conjugal transfer protein TraR -
ECTO124_RS26345 () 114054..114569 - 516 WP_000809872.1 type IV conjugative transfer system lipoprotein TraV -
ECTO124_RS26350 () 114569..114919 - 351 WP_071586941.1 conjugal transfer protein TrbD -
ECTO124_RS26355 () 114873..115460 - 588 WP_001309238.1 conjugal transfer protein TraP -
ECTO124_RS26360 () 115429..116880 - 1452 WP_000146675.1 conjugal transfer protein TraB -
ECTO124_RS26365 () 116880..117608 - 729 WP_001230767.1 type-F conjugative transfer system secretin TraK -
ECTO124_RS26370 () 117595..118161 - 567 WP_000399780.1 type IV conjugative transfer system protein TraE -
ECTO124_RS26375 () 118183..118494 - 312 WP_000012100.1 type IV conjugative transfer system protein TraL -
ECTO124_RS26380 () 118509..118868 - 360 WP_001099001.1 type IV conjugative transfer system pilin TraA -
ECTO124_RS26385 () 118901..119296 - 396 WP_001309237.1 conjugal transfer relaxosome protein TraY -
ECTO124_RS26390 () 119395..120084 - 690 WP_000283387.1 conjugal transfer transcriptional regulator TraJ -
ECTO124_RS26395 () 120271..120654 - 384 WP_001151538.1 relaxosome protein TraM -
ECTO124_RS26400 () 120975..121577 + 603 Protein_141 hypothetical protein VF
ECTO124_RS26405 () 121874..122695 - 822 WP_001234445.1 DUF945 domain-containing protein -
ECTO124_RS26410 () 122805..123101 - 297 WP_001545326.1 hypothetical protein -
ECTO124_RS26420 () 123493..123697 + 205 Protein_144 pilus protein -
ECTO124_RS26425 () 123998..124156 - 159 WP_001312861.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 124200..124424 - 225 NuclAT_0 - Antitoxin Detail
- () 124200..124424 - 225 NuclAT_0 - Antitoxin Detail
- () 124200..124424 - 225 NuclAT_0 - Antitoxin Detail
- () 124200..124424 - 225 NuclAT_0 - Antitoxin Detail
ECTO124_RS27640 () 124236..124415 + 180 WP_001309233.1 hypothetical protein -
ECTO124_RS26430 () 124436..125155 - 720 WP_001276217.1 plasmid SOS inhibition protein A -
ECTO124_RS26435 () 125152..125586 - 435 WP_000845953.1 conjugation system SOS inhibitor PsiB -
ECTO124_RS26440 () 125655..127619 - 1965 WP_001537566.1 ParB/RepB/Spo0J family partition protein -
ECTO124_RS26445 () 127680..127913 - 234 WP_000006003.1 DUF905 family protein -
ECTO124_RS26450 () 127971..128498 - 528 WP_000290834.1 single-stranded DNA-binding protein -
ECTO124_RS26470 () 129323..129661 - 339 WP_072198834.1 class I SAM-dependent methyltransferase -
ECTO124_RS26475 () 129932..131293 - 1362 WP_000170705.1 DUF3560 domain-containing protein -
ECTO124_RS26480 () 131345..131575 - 231 WP_001537563.1 hypothetical protein -
ECTO124_RS27775 () 132256..132564 + 309 WP_050576143.1 hypothetical protein -
ECTO124_RS26495 () 132543..132734 - 192 WP_001027049.1 hypothetical protein -
ECTO124_RS26500 () 132734..133153 - 420 WP_000271761.1 DUF1380 family protein -
ECTO124_RS26505 () 133200..133502 - 303 WP_001364029.1 antirestriction protein -
ECTO124_RS26520 () 134039..134809 - 771 WP_001044390.1 hypothetical protein -
ECTO124_RS26525 () 134854..135288 - 435 WP_000274451.1 DUF1380 family protein -
ECTO124_RS26530 () 135302..135523 - 222 WP_001104892.1 hypothetical protein -
ECTO124_RS26535 () 135524..136207 - 684 WP_000086171.1 DNA methylase -
ECTO124_RS26540 () 136283..136594 - 312 WP_001309256.1 hypothetical protein -
ECTO124_RS27645 () 136658..137017 - 360 WP_001336695.1 DUF1281 domain-containing protein -
ECTO124_RS27650 () 137024..137167 - 144 WP_000270807.1 DUF1281 domain-containing protein -
ECTO124_RS26560 () 137334..138110 - 777 Protein_166 hypothetical protein -
ECTO124_RS26565 () 138344..139306 - 963 WP_000756328.1 ParB/RepB/Spo0J family partition protein -
ECTO124_RS26570 () 139303..140508 - 1206 WP_000817635.1 Plasmid partition protein A VF
ECTO124_RS26580 () 141266..141517 + 252 WP_001132895.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
ECTO124_RS26585 () 141514..141801 + 288 WP_001270422.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
ECTO124_RS26590 () 141803..142214 + 412 Protein_171 DDE-type integrase/transposase/recombinase -
ECTO124_RS26600 () 142846..143836 + 991 Protein_172 RepB family plasmid replication initiator protein -
ECTO124_RS26605 () 144079..144819 - 741 WP_001066947.1 IS91 family transposase ISMno23 Transposase
ECTO124_RS26610 () 144940..145128 - 189 WP_001332784.1 hypothetical protein -
ECTO124_RS26615 () 145495..146665 + 1171 Protein_175 hypothetical protein -
ECTO124_RS26620 () 146891..147067 - 177 Protein_176 IS3 family transposase -
ECTO124_RS26625 () 147511..147783 - 273 WP_001322642.1 adhesin biosynthesis transcription regulatory family protein -
ECTO124_RS26630 () 148305..148791 - 487 Protein_178 transposase -
ECTO124_RS26640 () 148836..149287 - 452 Protein_179 IS3 family transposase IS629 Transposase
ECTO124_RS26645 () 149403..149632 - 230 Protein_180 group II intron reverse transcriptase/maturase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance