NZ_LS9921691..172923

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 172923 bp
Accession: NZ_LS992169        Location: 1..172923         Organism: Escherichia coli isolate Escherichia coli str. TO60       Replicon: plasmid 2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
ECTO60_RS26750 () 156..329 - 174 Protein_0 IS5 family transposase ISKpn26 Transposase
ECTO60_RS26755 () 330..644 - 315 Protein_1 IS5 family transposase ISKpn26 Transposase
ECTO60_RS25020 () 1317..2056 - 740 Protein_2 IS3 family transposase IS629 Transposase
ECTO60_RS25025 () 2158..2418 + 261 WP_000371882.1 hypothetical protein -
ECTO60_RS25030 () 2415..2924 + 510 WP_000194542.1 hypothetical protein -
ECTO60_RS25035 () 2944..3290 - 347 Protein_5 hypothetical protein -
ECTO60_RS25040 () 3419..3754 + 336 WP_001080732.1 colicin transporter -
ECTO60_RS25065 () 5326..5873 + 548 Protein_7 primase alpha helix C-terminal domain-containing protein -
ECTO60_RS25070 () 6205..7080 + 876 WP_001224623.1 ChaN family lipoprotein -
ECTO60_RS25075 () 7088..7864 + 777 WP_000981091.1 energy transducer TonB -
ECTO60_RS25080 () 8033..10294 + 2262 WP_001100763.1 TonB-dependent receptor -
ECTO60_RS25090 () 10363..11538 + 1176 WP_001020413.1 putative protein YncE VF
ECTO60_RS25095 () 12061..12366 - 306 Protein_12 IS91 family transposase ISSbo1 Transposase
ECTO60_RS25100 () 12392..13131 + 740 Protein_13 IS3 family transposase IS629 Transposase
ECTO60_RS25110 () 13804..15312 + 1509 WP_001189113.1 group II intron reverse transcriptase/maturase -
ECTO60_RS25115 () 15402..15785 + 384 Protein_15 IS3 family transposase IS629 Transposase
ECTO60_RS25120 () 15814..16218 + 405 WP_000839179.1 IS66 family transposase ISEc22 Transposase
ECTO60_RS25125 () 16215..16562 + 348 WP_000612626.1 IS66 family transposase ISKpn24 Transposase
ECTO60_RS25130 () 16611..17556 + 946 Protein_18 IS66 family transposase ISEc8 Transposase
ECTO60_RS25135 () 17642..18664 + 1023 WP_001310017.1 IS21 family transposase IS100kyp Transposase
ECTO60_RS25140 () 18661..19443 + 783 WP_001300609.1 IS21 family transposase IS100kyp Transposase
ECTO60_RS25145 () 19511..20119 + 609 Protein_21 IS66 family transposase ISEc22 Transposase
ECTO60_RS25150 () 20182..20973 - 792 WP_000977394.1 DUF4198 domain-containing protein -
ECTO60_RS25155 () 20980..22950 - 1971 WP_001298664.1 Hemin receptor VF
ECTO60_RS25160 () 23232..23668 + 437 Protein_24 IS3 family transposase IS2 Transposase
ECTO60_RS25165 () 24193..24465 + 273 WP_001322642.1 adhesin biosynthesis transcription regulatory family protein -
ECTO60_RS25170 () 24911..25086 + 176 Protein_26 IS3 family transposase -
ECTO60_RS25175 () 25312..26481 - 1170 WP_001072358.1 hypothetical protein -
ECTO60_RS25180 () 26848..27036 + 189 WP_001309252.1 hypothetical protein -
ECTO60_RS25185 () 27157..27897 + 741 WP_001066941.1 tyrosine-type recombinase/integrase -
ECTO60_RS25190 () 28182..29159 - 978 WP_000361610.1 RepB family plasmid replication initiator protein -
ECTO60_RS25200 () 29945..30676 + 732 WP_001617898.1 hypothetical protein -
ECTO60_RS25205 () 31045..31293 - 249 Protein_32 abortive infection family protein -
ECTO60_RS25210 () 31351..31596 + 246 Protein_33 IS1 family transposase -
ECTO60_RS25215 () 31647..32351 + 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
ECTO60_RS25225 () 32357..32545 + 189 WP_134163303.1 hypothetical protein -
ECTO60_RS25240 () 33211..33441 + 231 WP_000218642.1 hypothetical protein -
ECTO60_RS25245 () 33493..34854 + 1362 WP_000170714.1 DUF3560 domain-containing protein -
ECTO60_RS25250 () 34902..35465 + 564 WP_001348621.1 class I SAM-dependent methyltransferase -
ECTO60_RS25255 () 35491..35733 + 243 WP_001617878.1 hypothetical protein -
ECTO60_RS26760 () 35896..36231 + 336 WP_013023883.1 hypothetical protein -
ECTO60_RS25270 () 36376..36915 + 540 WP_000290841.1 single-stranded DNA-binding protein -
ECTO60_RS25275 () 36978..37211 + 234 WP_000005990.1 DUF905 family protein -
ECTO60_RS25280 () 37277..39235 + 1959 WP_000117179.1 ParB/RepB/Spo0J family partition protein -
ECTO60_RS25285 () 39290..39724 + 435 WP_000845940.1 conjugation system SOS inhibitor PsiB -
ECTO60_RS25290 () 39721..40440 + 720 WP_001276232.1 plasmid SOS inhibition protein A -
- () 40452..40638 + 187 NuclAT_0 - -
- () 40452..40638 + 187 NuclAT_0 - -
- () 40452..40638 + 187 NuclAT_0 - -
- () 40452..40638 + 187 NuclAT_0 - -
ECTO60_RS25295 () 40686..42055 + 1370 WP_085947770.1 IS3 family transposase IS150 Transposase
- () 42082..42122 + 41 NuclAT_1 - Antitoxin Detail
- () 42082..42122 + 41 NuclAT_1 - Antitoxin Detail
- () 42082..42122 + 41 NuclAT_1 - Antitoxin Detail
- () 42082..42122 + 41 NuclAT_1 - Antitoxin Detail
ECTO60_RS25300 () 42166..42324 + 159 WP_001312861.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
ECTO60_RS26765 () 42767..43102 + 336 WP_197731391.1 hypothetical protein -
ECTO60_RS26770 () 43015..43221 + 207 WP_000275859.1 hypothetical protein -
ECTO60_RS25320 () 43246..43533 + 288 WP_000107535.1 hypothetical protein -
ECTO60_RS25325 () 43652..44473 + 822 WP_001234469.1 DUF945 domain-containing protein -
ECTO60_RS25330 () 44770..45372 - 603 WP_000243712.1 hypothetical protein VF
ECTO60_RS25335 () 45703..46086 + 384 WP_001151566.1 relaxosome protein TraM -
ECTO60_RS25340 () 46220..46897 + 678 WP_001348626.1 PAS domain-containing protein -
ECTO60_RS25345 () 46985..47212 + 228 WP_001254388.1 conjugal transfer relaxosome protein TraY -
ECTO60_RS25350 () 47246..47608 + 363 WP_000338606.1 type IV conjugative transfer system pilin TraA -
ECTO60_RS25355 () 47613..47924 + 312 WP_000012107.1 type IV conjugative transfer system protein TraL -
ECTO60_RS25360 () 47946..48512 + 567 WP_000399791.1 type IV conjugative transfer system protein TraE -
ECTO60_RS25365 () 48523..49227 + 705 WP_148725207.1 type-F conjugative transfer system secretin TraK -
ECTO60_RS25370 () 49227..50678 + 1452 WP_000146687.1 conjugal transfer protein TraB -
ECTO60_RS25375 () 50647..51234 + 588 WP_013023871.1 conjugal transfer protein TraP -
ECTO60_RS25380 () 51173..51532 + 360 WP_001617876.1 conjugal transfer protein TrbD -
ECTO60_RS25385 () 51532..52047 + 516 WP_000809886.1 type IV conjugative transfer system lipoprotein TraV -
ECTO60_RS25390 () 52182..52403 + 222 WP_001278694.1 conjugal transfer protein TraR -
ECTO60_RS25395 () 52563..55190 + 2628 WP_134163304.1 type IV secretion system protein TraC -
ECTO60_RS25400 () 55187..55573 + 387 WP_000214084.1 type-F conjugative transfer system protein TrbI -
ECTO60_RS25405 () 55570..56202 + 633 WP_001203727.1 type-F conjugative transfer system protein TraW -
ECTO60_RS25410 () 56199..57191 + 993 WP_000830190.1 conjugal transfer pilus assembly protein TraU -
ECTO60_RS25415 () 57221..57526 + 306 WP_000224413.1 hypothetical protein -
ECTO60_RS25420 () 57535..58173 + 639 WP_001080259.1 type-F conjugative transfer system pilin assembly protein TrbC -
ECTO60_RS25425 () 58170..60020 + 1851 WP_000821866.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
ECTO60_RS25430 () 60047..60304 + 258 WP_000864347.1 conjugal transfer protein TrbE -
ECTO60_RS25435 () 60297..61040 + 744 WP_001030401.1 type-F conjugative transfer system pilin assembly protein TraF -
ECTO60_RS25440 () 61170..62150 + 981 WP_000019450.1 IS5 family transposase ISKpn26 Transposase
ECTO60_RS25445 () 62305..63002 + 698 Protein_75 IS1 family transposase IS1G Transposase
ECTO60_RS25450 () 63050..63370 + 321 WP_001348757.1 conjugal transfer protein TrbA -
ECTO60_RS25455 () 63497..63781 + 285 WP_001617873.1 type-F conjugative transfer system pilin chaperone TraQ -
ECTO60_RS25460 () 63768..64313 + 546 WP_000059829.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
ECTO60_RS25465 () 64243..64590 + 348 WP_071571857.1 P-type conjugative transfer protein TrbJ -
ECTO60_RS25470 () 64538..64963 + 426 WP_001348758.1 F-type conjugal transfer protein TrbF -
ECTO60_RS25475 () 64950..66323 + 1374 WP_000944328.1 conjugal transfer protein TraH -
ECTO60_RS25480 () 66320..69139 + 2820 WP_001007062.1 conjugal transfer mating pair stabilization protein TraG -
ECTO60_RS25485 () 69158..69655 + 498 WP_000605862.1 entry exclusion protein -
ECTO60_RS25490 () 69687..70418 + 732 WP_000850429.1 complement resistance protein TraT -
ECTO60_RS25495 () 70621..71400 + 780 WP_000199914.1 hypothetical protein -
ECTO60_RS25500 () 71397..73622 + 2226 WP_047605472.1 type IV conjugative transfer system coupling protein TraD -
ECTO60_RS25505 () 73622..78892 + 5271 WP_001617867.1 Multifunctional conjugation protein TraI Relaxase
ECTO60_RS25510 () 78912..79658 + 747 WP_000205718.1 conjugal transfer pilus acetylase TraX -
ECTO60_RS25515 () 79713..80273 + 561 WP_000139341.1 fertility inhibition protein FinO -
ECTO60_RS25520 () 80404..80616 + 213 WP_013023861.1 hypothetical protein -
ECTO60_RS25530 () 81175..81600 + 426 WP_000422741.1 IS66 family transposase ISEc23 Transposase
ECTO60_RS25535 () 81597..81947 + 351 WP_000624722.1 IS66 family transposase ISEc23 Transposase
ECTO60_RS25540 () 81978..83591 + 1614 WP_000080195.1 IS66 family transposase ISEc23 Transposase
ECTO60_RS26640 () 83669..83955 + 287 Protein_94 DUF2726 domain-containing protein -
- () 83922..83982 - 61 NuclAT_2 - Antitoxin Detail
- () 83922..83982 - 61 NuclAT_2 - Antitoxin Detail
- () 83922..83982 - 61 NuclAT_2 - Antitoxin Detail
- () 83922..83982 - 61 NuclAT_2 - Antitoxin Detail
ECTO60_RS25550 () 84027..84161 + 135 WP_023144756.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
ECTO60_RS25555 () 84458..84712 + 255 WP_000083850.1 replication regulatory protein RepA -
ECTO60_RS26775 () 84818..84952 + 135 Protein_97 protein CopA/IncA -
ECTO60_RS25560 () 84949..85023 + 75 WP_031943482.1 RepA leader peptide Tap -
ECTO60_RS25565 () 85016..85873 + 858 WP_001617855.1 incFII family plasmid replication initiator RepA -
ECTO60_RS25575 () 86813..87466 + 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
ECTO60_RS25580 () 87559..87816 + 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
ECTO60_RS25585 () 87749..88150 + 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
ECTO60_RS25590 () 88435..89745 + 1311 WP_001262765.1 DUF262 domain-containing protein -
ECTO60_RS25595 () 89774..89872 + 99 Protein_104 IS1 family transposase -
ECTO60_RS25600 () 90022..90882 - 861 WP_000027057.1 Beta-lactamase TEM ARG
ECTO60_RS25605 () 91181..91885 + 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
ECTO60_RS26780 () 91937..92041 - 105 Protein_107 tunicamycin resistance protein -
ECTO60_RS25615 () 92054..92914 - 861 WP_000557454.1 SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD ARG
ECTO60_RS25625 () 93057..94019 + 963 Protein_109 IS4 family transposase IS10R Transposase
ECTO60_RS25630 () 94129..94941 + 813 Protein_110 IS4 family transposase IS10R Transposase
ECTO60_RS25635 () 94987..95691 - 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
ECTO60_RS25640 () 95774..95962 + 189 WP_077777123.1 hypothetical protein -
ECTO60_RS25645 () 96013..97149 + 1137 WP_000080860.1 DUF3883 domain-containing protein -
ECTO60_RS25650 () 97264..97528 + 265 Protein_114 transposase -
ECTO60_RS25655 () 97581..98285 - 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
ECTO60_RS25660 () 98584..98775 - 192 WP_001027516.1 hypothetical protein -
ECTO60_RS25665 () 98772..99194 - 423 WP_000271753.1 DUF1380 family protein -
ECTO60_RS25670 () 99241..99543 - 303 WP_001671341.1 antirestriction protein -
ECTO60_RS25680 () 100083..100859 - 777 WP_001753849.1 hypothetical protein -
ECTO60_RS25685 () 100910..101344 - 435 WP_000274437.1 DUF1380 family protein -
ECTO60_RS25690 () 101358..101579 - 222 WP_001104873.1 hypothetical protein -
ECTO60_RS25695 () 101580..102263 - 684 WP_000086185.1 DNA methylase -
ECTO60_RS25700 () 102340..102644 - 305 Protein_123 hypothetical protein -
ECTO60_RS25705 () 102648..103550 - 903 WP_001348615.1 DUF1281 domain-containing protein -
ECTO60_RS25720 () 104417..105388 - 972 WP_000817036.1 ParB/RepB/Spo0J family plasmid partition protein -
ECTO60_RS25725 () 105388..106554 - 1167 WP_000772446.1 Sporulation initiation inhibitor protein Soj VF
ECTO60_RS25730 () 107142..107897 - 756 WP_000852146.1 replication initiation protein RepE -
ECTO60_RS25735 () 108671..109477 - 807 WP_000016982.1 site-specific integrase -
ECTO60_RS25740 () 109478..109783 - 306 WP_001159868.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
ECTO60_RS25745 () 109785..110003 - 219 WP_000813634.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
ECTO60_RS25750 () 110711..111706 + 996 WP_000246636.1 hypothetical protein -
ECTO60_RS25755 () 111710..112642 + 933 WP_000991832.1 hypothetical protein -
ECTO60_RS25760 () 112779..113476 - 698 Protein_133 IS1 family transposase IS1G Transposase
ECTO60_RS25765 () 113690..116806 - 3117 WP_001553854.1 HsdR family type I site-specific deoxyribonuclease -
ECTO60_RS25770 () 116928..118211 - 1284 WP_001617890.1 restriction endonuclease subunit S -
ECTO60_RS25775 () 118208..119764 - 1557 WP_001617892.1 type I restriction-modification system subunit M -
ECTO60_RS25780 () 119947..120168 + 222 WP_001190712.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
ECTO60_RS25785 () 120168..120548 + 381 WP_001216034.1 type II toxin-antitoxin system death-on-curing family toxin Toxin Detail
ECTO60_RS25790 () 120553..120732 + 180 WP_001513661.1 hypothetical protein -
ECTO60_RS25795 () 120760..121119 + 360 WP_001513660.1 hypothetical protein -
ECTO60_RS25800 () 121043..121456 + 414 Protein_141 IS3 family transposase ISLad1 Transposase
ECTO60_RS25805 () 121406..121723 - 318 WP_001513659.1 hypothetical protein -
ECTO60_RS25810 () 121951..122931 - 981 WP_000019407.1 IS5 family transposase IS5D Transposase
ECTO60_RS25815 () 123175..124578 + 1404 WP_001373486.1 S-methylmethionine permease -
ECTO60_RS25820 () 124565..125497 + 933 WP_000081352.1 homocysteine S-methyltransferase -
ECTO60_RS25825 () 125606..125935 - 330 Protein_146 TOBE domain-containing protein -
ECTO60_RS25830 () 125951..126423 - 473 Protein_147 IS1 family transposase IS1R Transposase
ECTO60_RS25835 () 126476..127180 - 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
ECTO60_RS25840 () 127146..128252 - 1107 Protein_149 IS1182 family transposase ISCfr1 Transposase
ECTO60_RS25845 () 128315..129019 + 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
ECTO60_RS25855 () 129072..129578 + 507 Protein_151 transposase -
ECTO60_RS25860 () 129587..130447 + 861 WP_000493383.1 EamA family transporter -
ECTO60_RS25865 () 130479..131678 - 1200 WP_000804064.1 Tetracycline resistance protein, class C ARG
ECTO60_RS25870 () 131784..132410 + 627 WP_031606906.1 tetracycline resistance transcriptional repressor TetR(A) -
ECTO60_RS25875 () 132442..132678 - 237 WP_042005022.1 hypothetical protein -
ECTO60_RS25880 () 132732..133568 - 837 WP_000480972.1 hypothetical protein ARG
ECTO60_RS25885 () 133568..134371 - 804 WP_001082319.1 Aminoglycoside 3'-phosphotransferase ARG
ECTO60_RS25890 () 134432..135247 - 816 WP_001043260.1 Dihydropteroate synthase ARG
ECTO60_RS25900 () 135555..135731 - 177 Protein_159 replication protein C -
ECTO60_RS25905 () 135792..136496 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
ECTO60_RS25915 () 136618..137523 + 906 WP_000219391.1 hypothetical protein ARG
ECTO60_RS25920 () 137520..138758 + 1239 WP_000004159.1 MFS transporter -
ECTO60_RS25925 () 138758..139342 + 585 WP_001137892.1 TetR family transcriptional regulator -
ECTO60_RS25940 () 139835..140599 - 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
ECTO60_RS26650 () 140717..140782 - 66 Protein_165 EAL domain-containing protein -
ECTO60_RS25950 () 140826..141131 - 306 WP_000130000.1 hypothetical protein Relaxase
ECTO60_RS25955 () 141142..142347 - 1206 WP_000184001.1 chromate efflux transporter -
ECTO60_RS25960 () 142503..142706 - 204 WP_000376616.1 hypothetical protein -
ECTO60_RS25970 () 142834..143673 - 840 WP_000259031.1 Dihydropteroate synthase ARG
ECTO60_RS25975 () 143667..144014 - 348 WP_000679427.1 Multidrug transporter EmrE ARG
ECTO60_RS25980 () 144220..145008 - 789 WP_000503573.1 Streptomycin 3''-adenylyltransferase ARG
ECTO60_RS25985 () 145139..145612 - 474 WP_001389366.1 Dihydrofolate reductase type 1 ARG
ECTO60_RS25990 () 145770..146519 + 750 Protein_173 IS91 family transposase ISAzo26 Transposase
ECTO60_RS25995 () 146578..147282 + 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
ECTO60_RS26000 () 147332..147550 - 219 Protein_175 IS4 family transposase -
ECTO60_RS26005 () 147565..148262 - 698 Protein_176 IS1 family transposase IS1R Transposase
ECTO60_RS26915 () 148462..148575 + 114 Protein_177 IS6 family transposase -
ECTO60_RS26020 () 148725..148883 + 159 WP_000449408.1 DsbA family protein -
ECTO60_RS26025 () 148873..149379 + 507 WP_000949452.1 protein disulfide oxidoreductase -
ECTO60_RS26030 () 149562..150377 + 816 WP_012372823.1 Na(+)-translocating NADH-quinone reductase subunit C -
ECTO60_RS26040 () 150724..152610 + 1887 WP_000118029.1 FTR1 family iron permease -
ECTO60_RS26045 () 152651..153178 + 528 WP_000178050.1 iron transporter -
ECTO60_RS26050 () 153282..154661 + 1380 WP_000119836.1 DUF2318 domain-containing protein -
ECTO60_RS26055 () 154664..155947 + 1284 WP_000964653.1 ABC transporter permease -
ECTO60_RS26060 () 155937..157067 + 1131 WP_000729218.1 ABC transporter permease -
ECTO60_RS26065 () 157072..157767 + 696 WP_000117262.1 Lipoprotein-releasing system ATP-binding protein LolD VF
ECTO60_RS26070 () 157754..158239 + 486 WP_001267176.1 TlpA family protein disulfide reductase -
ECTO60_RS26075 () 158264..158749 + 486 WP_000874189.1 hypothetical protein -
ECTO60_RS26080 () 158871..159504 + 634 Protein_189 histidine-type phosphatase -
ECTO60_RS26785 () 159654..159827 - 174 Protein_190 IS5 family transposase ISKpn26 Transposase
ECTO60_RS26790 () 159828..160142 - 315 Protein_191 IS5 family transposase ISKpn26 Transposase
ECTO60_RS26095 () 160815..161554 - 740 Protein_192 IS3 family transposase IS629 Transposase
ECTO60_RS26100 () 161656..161916 + 261 WP_000371882.1 hypothetical protein -
ECTO60_RS26105 () 161913..162422 + 510 WP_000194542.1 hypothetical protein -
ECTO60_RS26110 () 162442..162789 - 348 WP_000142452.1 hypothetical protein -
ECTO60_RS26115 () 162918..163253 + 336 WP_001080732.1 colicin transporter -
ECTO60_RS26140 () 164825..165372 + 548 Protein_197 primase alpha helix C-terminal domain-containing protein -
ECTO60_RS26145 () 165704..166579 + 876 WP_001224623.1 ChaN family lipoprotein -
ECTO60_RS26150 () 166587..167363 + 777 WP_000981091.1 energy transducer TonB -
ECTO60_RS26155 () 167532..169787 + 2256 Protein_200 TonB-dependent receptor -
ECTO60_RS26160 () 169856..171011 + 1156 Protein_201 TieB -
ECTO60_RS26795 () 171544..171828 - 285 Protein_202 IS91 family transposase ISSbo1 Transposase
ECTO60_RS26170 () 171854..172593 + 740 Protein_203 IS3 family transposase IS629 Transposase

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance