MGE detailed information
MGE type: Genomic_island MGE length: 43236 bp
Accession: NZ_LS483418 Location: 1763382..1806617 Organism: Streptococcus suis strain NCTC10234 Replicon: chromosome
Accession: NZ_LS483418 Location: 1763382..1806617 Organism: Streptococcus suis strain NCTC10234 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM62_RS08845 () | 1759324..1762443 | + | 3120 | WP_012775354.1 | LPXTG cell wall anchor domain-containing protein | - |
| DQM62_RS08850 () | 1762523..1763389 | + | 867 | WP_014917319.1 | Hsp33 family molecular chaperone HslO | - |
| DQM62_RS08855 () | 1763382..1764386 | + | 1005 | WP_012775355.1 | tRNA dihydrouridine synthase DusB | - |
| DQM62_RS08860 () | 1764532..1765305 | - | 774 | WP_012027854.1 | NUDIX hydrolase | - |
| DQM62_RS08865 () | 1765298..1766119 | - | 822 | WP_012027855.1 | nicotinamide riboside transporter PnuC | - |
| DQM62_RS08870 () | 1766129..1767166 | - | 1038 | WP_012028524.1 | AAA family ATPase | - |
| DQM62_RS08875 () | 1767280..1769733 | - | 2454 | WP_012027858.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| DQM62_RS08880 () | 1769739..1770197 | - | 459 | WP_012027859.1 | transcriptional regulator | - |
| DQM62_RS08885 () | 1770347..1770685 | + | 339 | WP_012027860.1 | thiol reductase thioredoxin | - |
| DQM62_RS08890 () | 1770685..1771386 | + | 702 | WP_012027861.1 | hypothetical protein | - |
| DQM62_RS08895 () | 1771649..1772689 | - | 1041 | WP_012775698.1 | elongation factor Ts | - |
| DQM62_RS08900 () | 1772845..1773621 | - | 777 | WP_012775356.1 | 30S ribosomal protein S2 | - |
| DQM62_RS08905 () | 1773968..1774480 | - | 513 | WP_012775452.1 | adenylate kinase | - |
| DQM62_RS08915 () | 1775134..1780212 | - | 5079 | WP_014917320.1 | S8 family serine peptidase | - |
| DQM62_RS08920 () | 1780356..1780895 | - | 540 | WP_002940254.1 | transcription termination/antitermination protein NusG | - |
| DQM62_RS08925 () | 1781005..1781181 | - | 177 | WP_002940255.1 | preprotein translocase subunit SecE | - |
| DQM62_RS08930 () | 1781191..1781343 | - | 153 | WP_002940258.1 | 50S ribosomal protein L33 | - |
| DQM62_RS08935 () | 1781377..1783590 | - | 2214 | WP_012027868.1 | penicillin-binding protein PBP2A | - |
| DQM62_RS08940 () | 1783743..1784711 | + | 969 | WP_012027869.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| DQM62_RS08945 () | 1784713..1785579 | + | 867 | WP_012027870.1 | RluA family pseudouridine synthase | - |
| DQM62_RS08950 () | 1785606..1786418 | - | 813 | WP_014917321.1 | pur operon repressor | - |
| DQM62_RS08955 () | 1786520..1787386 | - | 867 | WP_012027872.1 | phosphotransferase | - |
| DQM62_RS08960 () | 1787386..1788335 | - | 950 | Protein_1667 | 3'-5' exoribonuclease YhaM family protein | - |
| DQM62_RS08965 () | 1788325..1789563 | - | 1239 | WP_012775699.1 | DNA recombination protein RmuC | - |
| DQM62_RS08970 () | 1789564..1790196 | - | 633 | WP_012027875.1 | thiamine diphosphokinase | - |
| DQM62_RS08975 () | 1790189..1790848 | - | 660 | WP_012027876.1 | Ribulose-phosphate 3-epimerase | VF |
| DQM62_RS08980 () | 1790863..1791738 | - | 876 | WP_012027877.1 | ribosome small subunit-dependent GTPase A | - |
| DQM62_RS08990 () | 1792635..1794212 | - | 1578 | WP_012027878.1 | ABC transporter ATP-binding protein/permease | - |
| DQM62_RS08995 () | 1794209..1795456 | - | 1248 | WP_012027879.1 | radical SAM protein | - |
| DQM62_RS09000 () | 1795819..1796682 | - | 864 | WP_012027880.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| DQM62_RS09010 () | 1797172..1799616 | - | 2445 | WP_012027881.1 | alkaline phosphatase family protein | - |
| DQM62_RS09015 () | 1799629..1801359 | - | 1731 | WP_012775361.1 | membrane protein | - |
| DQM62_RS09020 () | 1801724..1802632 | - | 909 | WP_012027884.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| DQM62_RS09025 () | 1802616..1803146 | - | 531 | WP_009910909.1 | DUF1697 domain-containing protein | - |
| DQM62_RS09030 () | 1803160..1803417 | - | 258 | WP_012775363.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| DQM62_RS09035 () | 1803419..1803679 | - | 261 | WP_002939010.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DQM62_RS09040 () | 1803755..1804210 | - | 456 | WP_012028534.1 | 8-oxo-dGTP diphosphatase | - |
| DQM62_RS09045 () | 1804217..1804546 | - | 330 | WP_012775364.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DQM62_RS09050 () | 1804536..1804823 | - | 288 | WP_012028535.1 | hypothetical protein | Antitoxin Detail |
| DQM62_RS09055 () | 1804921..1805289 | - | 369 | WP_014917322.1 | hypothetical protein | - |
| DQM62_RS09060 () | 1805282..1805851 | - | 570 | WP_012775700.1 | ribonuclease M5 | - |
| DQM62_RS09065 () | 1805835..1806617 | - | 783 | WP_012028536.1 | TatD family hydrolase | - |
| DQM62_RS09070 () | 1806724..1806861 | - | 138 | WP_002939016.1 | 50S ribosomal protein L34 | - |
| DQM62_RS09075 () | 1807029..1808024 | - | 996 | WP_012775367.1 | protein jag | - |
| DQM62_RS09080 () | 1808044..1808856 | - | 813 | WP_012027897.1 | YidC/Oxa1 family membrane protein insertase | - |
| DQM62_RS09085 () | 1808840..1809199 | - | 360 | WP_004194560.1 | ribonuclease P protein component | - |
| DQM62_RS09090 () | 1809270..1810664 | - | 1395 | WP_012027899.1 | argininosuccinate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus suis SC84 | Genomic island | TA6281, TA10159 | NC_012924 | 1874993..1918220 | 0 | |
| Streptococcus suis strain ZY05719 isolate diseased pig | Genomic island | TA46538, TA46539 | NZ_CP007497 | 1873994..1917221 | 0 |