MGE detailed information
MGE type: Conjugative plasmid MGE length: 96021 bp
Accession: NZ_LR898869 Location: 1..96021 Organism: Escherichia coli isolate MSB1_1D-sc-2280324 Replicon: plasmid 2
Accession: NZ_LR898869 Location: 1..96021 Organism: Escherichia coli isolate MSB1_1D-sc-2280324 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMX26_RS21995 () | 46..1077 | + | 1032 | WP_000907874.1 | replication initiation protein | - |
| JMX26_RS22000 () | 1986..2255 | + | 270 | WP_000079928.1 | hypothetical protein | Antitoxin Detail |
| JMX26_RS22005 () | 2252..2533 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JMX26_RS22010 () | 2573..3421 | + | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| JMX26_RS22015 () | 3538..4011 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| JMX26_RS22020 () | 4754..5248 | - | 495 | WP_023278058.1 | hypothetical protein | - |
| JMX26_RS22025 () | 5304..5906 | - | 603 | WP_000517689.1 | hypothetical protein | - |
| JMX26_RS22030 () | 6260..7606 | + | 1347 | WP_001132021.1 | hypothetical protein | - |
| JMX26_RS22035 () | 7885..8589 | + | 705 | WP_076149007.1 | colicin-Ia domain protein | - |
| JMX26_RS22040 () | 8753..9952 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| JMX26_RS22045 () | 9962..10150 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| JMX26_RS22050 () | 10547..11692 | + | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| JMX26_RS22055 () | 11786..12319 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| JMX26_RS22060 () | 12316..12633 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| JMX26_RS22065 () | 13493..14596 | + | 1104 | WP_040028050.1 | colicin transporter | - |
| JMX26_RS22070 () | 14613..14948 | - | 336 | WP_001080730.1 | colicin 1A immunity protein | - |
| JMX26_RS22075 () | 15077..15424 | + | 348 | WP_000142441.1 | hypothetical protein | - |
| JMX26_RS22080 () | 15442..16032 | - | 591 | WP_000194573.1 | hypothetical protein | - |
| JMX26_RS22085 () | 16032..16289 | - | 258 | WP_000371885.1 | hypothetical protein | - |
| JMX26_RS22090 () | 16947..17231 | + | 285 | WP_001331078.1 | hypothetical protein | - |
| JMX26_RS22095 () | 17224..17913 | + | 690 | WP_000796232.1 | hypothetical protein | - |
| JMX26_RS22100 () | 17910..18698 | + | 789 | WP_000016498.1 | site-specific integrase | - |
| JMX26_RS22105 () | 18878..19522 | + | 645 | WP_001144036.1 | ParA family protein | - |
| JMX26_RS22110 () | 19609..19917 | + | 309 | WP_000048808.1 | hypothetical protein | - |
| JMX26_RS22115 () | 20331..21311 | + | 981 | WP_000688519.1 | plasmid segregation protein ParM | - |
| JMX26_RS22120 () | 21304..21720 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| JMX26_RS22125 () | 21722..22996 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| JMX26_RS22130 () | 22996..23433 | - | 438 | WP_000109072.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JMX26_RS22135 () | 23430..23678 | - | 249 | WP_000618111.1 | DinI-like family protein | - |
| JMX26_RS22140 () | 23742..24962 | - | 1221 | WP_000343760.1 | ISL3 family transposase ISKox3 | Transposase |
| JMX26_RS22145 () | 25420..26322 | + | 903 | WP_000273912.1 | DUF1281 domain-containing protein | - |
| JMX26_RS22150 () | 26319..26630 | + | 312 | WP_014640311.1 | hypothetical protein | - |
| JMX26_RS22155 () | 26706..27389 | + | 684 | WP_000086121.1 | DNA methylase | - |
| JMX26_RS22160 () | 27390..27611 | + | 222 | WP_001104893.1 | hypothetical protein | - |
| JMX26_RS22165 () | 27625..28059 | + | 435 | WP_000274493.1 | DUF1380 family protein | - |
| JMX26_RS22170 () | 28110..28886 | + | 777 | WP_024135924.1 | hypothetical protein | - |
| JMX26_RS22175 () | 29427..29729 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| JMX26_RS22180 () | 29776..30198 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| JMX26_RS22185 () | 30195..30386 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| JMX26_RS22190 () | 30720..30788 | - | 69 | Protein_39 | pilus protein | - |
| JMX26_RS22195 () | 31157..31684 | + | 528 | WP_001276114.1 | single-stranded DNA-binding protein | - |
| JMX26_RS22200 () | 31742..31975 | + | 234 | WP_000005985.1 | DUF905 family protein | - |
| JMX26_RS22205 () | 32034..33992 | + | 1959 | WP_001145462.1 | ParB/RepB/Spo0J family partition protein | - |
| JMX26_RS22210 () | 34047..34481 | + | 435 | WP_000845904.1 | conjugation system SOS inhibitor PsiB | - |
| JMX26_RS22215 () | 34478..35197 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| JMX26_RS22220 () | 35194..35790 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| JMX26_RS22225 () | 36253..36753 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| JMX26_RS22230 () | 37482..37916 | + | 435 | WP_032073204.1 | hypothetical protein | - |
| JMX26_RS22235 () | 38010..38276 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| JMX26_RS22240 () | 38341..39231 | + | 891 | WP_000038332.1 | ISNCY family transposase ISSen7 | VF |
| JMX26_RS22245 () | 39231..39476 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| JMX26_RS22250 () | 39507..39758 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| JMX26_RS22255 () | 40339..41187 | + | 849 | WP_001077021.1 | DUF4942 domain-containing protein | - |
| JMX26_RS22260 () | 41273..41608 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| JMX26_RS22265 () | 41842..42174 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| JMX26_RS22270 () | 42185..44884 | + | 2700 | WP_010891268.1 | hypothetical protein | Relaxase |
| JMX26_RS22275 () | 44921..47212 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| JMX26_RS22280 () | 47205..48275 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| JMX26_RS22285 () | 48294..49502 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 49682..49744 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 49682..49744 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 49682..49744 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 49682..49744 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| JMX26_RS22290 () | 49794..49946 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| JMX26_RS22295 () | 50018..50269 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| JMX26_RS22300 () | 50928..51104 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| JMX26_RS22305 () | 51496..51705 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| JMX26_RS22310 () | 51777..52427 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| JMX26_RS22315 () | 52501..54669 | - | 2169 | WP_000698357.1 | DotA/TraY family protein | - |
| JMX26_RS22320 () | 54766..55350 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| JMX26_RS22325 () | 55379..56581 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| JMX26_RS22330 () | 56548..57162 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| JMX26_RS22335 () | 57162..60206 | - | 3045 | WP_001024782.1 | IncI1-type conjugal transfer protein TraU | - |
| JMX26_RS22340 () | 60296..61096 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| JMX26_RS22345 () | 61080..61268 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| JMX26_RS22350 () | 61332..61736 | - | 405 | WP_000086959.1 | IncI1-type conjugal transfer protein TraR | - |
| JMX26_RS22355 () | 61787..62314 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| JMX26_RS22360 () | 62314..63018 | - | 705 | WP_000801919.1 | IncI1-type conjugal transfer protein TraP | - |
| JMX26_RS22365 () | 63018..64307 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| JMX26_RS22370 () | 64310..65293 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| JMX26_RS22375 () | 65304..65996 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| JMX26_RS22380 () | 65993..66340 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| JMX26_RS22385 () | 66358..70125 | - | 3768 | WP_001141527.1 | DNA primase | - |
| JMX26_RS22390 () | 70215..70766 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| JMX26_RS22395 () | 70781..71071 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| JMX26_RS22400 () | 71068..72216 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| JMX26_RS22405 () | 72213..73031 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| JMX26_RS22410 () | 73028..73486 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| JMX26_RS22415 () | 73881..74465 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| JMX26_RS22420 () | 74525..75727 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| JMX26_RS22425 () | 75812..76636 | - | 825 | WP_001238939.1 | hypothetical protein | - |
| JMX26_RS22430 () | 76787..77941 | - | 1155 | WP_001139957.1 | integrase | - |
| JMX26_RS22435 () | 78069..78224 | + | 156 | WP_001302705.1 | hypothetical protein | - |
| JMX26_RS22440 () | 79462..79710 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| JMX26_RS22445 () | 79707..80999 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| JMX26_RS22450 () | 80999..81655 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| JMX26_RS22455 () | 81640..82200 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| JMX26_RS22460 () | 82210..82824 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| JMX26_RS22465 () | 82842..83939 | - | 1098 | WP_001208805.1 | hypothetical protein | VF |
| JMX26_RS22470 () | 83952..85505 | - | 1554 | WP_000362202.1 | hypothetical protein | VF |
| JMX26_RS22475 () | 85516..85968 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| JMX26_RS22480 () | 85955..87250 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| JMX26_RS22485 () | 87243..88925 | - | 1683 | WP_032311054.1 | hypothetical protein | VF |
| JMX26_RS22490 () | 88939..89376 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| JMX26_RS22495 () | 89376..90443 | - | 1068 | WP_000742600.1 | hypothetical protein | VF |
| JMX26_RS22500 () | 91117..91569 | - | 453 | Protein_101 | pili assembly chaperone | - |
| JMX26_RS22505 () | 91612..91866 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| JMX26_RS22510 () | 92134..92700 | - | 567 | WP_000776428.1 | hypothetical protein | - |
| JMX26_RS22515 () | 92714..93397 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| JMX26_RS22520 () | 93651..94184 | - | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| JMX26_RS22525 () | 94626..94913 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| JMX26_RS22530 () | 94831..95094 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli | Conjugative plasmid | TA10119, TA30466 | NC_025198 | 1..92339 | 0.004 |