NZ_LR8905371..158162

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 158162 bp
Accession: NZ_LR890537        Location: 1..158162         Organism: Escherichia coli isolate MSB1_8B-sc-2280300       Replicon: plasmid 2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JMX06_RS25400 () 1..978 + 978 WP_000361611.1 RepB family plasmid replication initiator protein -
JMX06_RS25405 () 1263..2003 - 741 WP_001066953.1 tyrosine-type recombinase/integrase -
JMX06_RS25410 () 2124..2306 - 183 WP_042344623.1 hypothetical protein -
JMX06_RS25415 () 2649..2956 - 308 Protein_3 type II toxin-antitoxin system ParD family antitoxin -
JMX06_RS25420 () 3449..4618 + 1170 WP_001072355.1 hypothetical protein -
JMX06_RS25425 () 4651..4779 + 129 Protein_5 IS481 family transposase -
JMX06_RS25430 () 4814..5107 - 294 WP_001105060.1 hypothetical protein -
JMX06_RS25435 () 5213..5488 - 276 WP_000421272.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
JMX06_RS25440 () 5488..5772 - 285 WP_001387467.1 ribbon-helix-helix domain-containing protein Antitoxin Detail
JMX06_RS25445 () 6377..7129 + 753 WP_000562172.1 IclR family transcriptional regulator -
JMX06_RS25450 () 7175..8140 - 966 WP_001022265.1 2-keto-3-deoxygluconate transporter -
JMX06_RS25455 () 8173..8553 - 381 WP_024946717.1 Rid family detoxifying hydrolase -
JMX06_RS25460 () 8578..9468 - 891 WP_001077068.1 dihydrodipicolinate synthase family protein -
JMX06_RS25465 () 9701..9895 - 195 WP_000796505.1 hypothetical protein -
JMX06_RS25470 () 9869..10309 + 441 Protein_14 zinc-binding dehydrogenase -
JMX06_RS25475 () 10440..11318 + 879 WP_000338039.1 sugar ABC transporter permease -
JMX06_RS25480 () 11308..12195 + 888 WP_001271561.1 carbohydrate ABC transporter permease -
JMX06_RS25485 () 12206..13030 + 825 WP_000922702.1 phosphodiesterase -
JMX06_RS25490 () 13036..14109 + 1074 WP_000950177.1 sn-glycerol-3-phosphate import ATP-binding protein UgpC VF
JMX06_RS25495 () 14102..15412 + 1311 WP_000476108.1 ABC transporter substrate-binding protein -
JMX06_RS25500 () 15471..15779 - 309 Protein_20 IS4 family transposase ISEc13 Transposase
JMX06_RS25505 () 15856..16089 - 234 Protein_21 Tn3 family transposase ISPsy39 Transposase
JMX06_RS25510 () 16111..16585 - 475 Protein_22 IS3 family transposase IS629 Transposase
JMX06_RS25515 () 16675..18183 - 1509 WP_001189111.1 group II intron reverse transcriptase/maturase -
JMX06_RS25520 () 18856..19577 - 722 Protein_24 IS3 family transposase IS629 Transposase
JMX06_RS25525 () 19602..20306 + 705 WP_001067834.1 IS6 family transposase IS26 Transposase
JMX06_RS25530 () 20360..23947 + 3588 Protein_26 Multifunctional conjugation protein TraI Relaxase
JMX06_RS25535 () 23967..24713 + 747 WP_000205718.1 conjugal transfer pilus acetylase TraX -
JMX06_RS25540 () 24768..25328 + 561 WP_000139341.1 fertility inhibition protein FinO -
JMX06_RS25545 () 25459..25671 + 213 WP_013023861.1 hypothetical protein -
JMX06_RS25550 () 26184..26470 + 287 Protein_30 DUF2726 domain-containing protein -
- () 26437..26497 - 61 NuclAT_2 - -
- () 26437..26497 - 61 NuclAT_2 - -
- () 26437..26497 - 61 NuclAT_2 - -
- () 26437..26497 - 61 NuclAT_2 - -
JMX06_RS25555 () 26542..26676 + 135 WP_023144756.1 type I toxin-antitoxin system Hok family toxin -
JMX06_RS25560 () 26973..27083 + 111 Protein_32 replication protein -
JMX06_RS25565 () 27152..27934 - 783 WP_001300609.1 IS21 family transposase IS100kyp Transposase
JMX06_RS25570 () 27931..28953 - 1023 WP_000255944.1 IS21 family transposase IS100kyp Transposase
JMX06_RS25575 () 29034..29186 + 153 WP_072258247.1 replication protein A -
JMX06_RS25580 () 29292..29426 + 135 Protein_36 protein CopA/IncA -
JMX06_RS25585 () 29423..29497 + 75 WP_031943482.1 RepA leader peptide Tap -
JMX06_RS25590 () 29490..30347 + 858 WP_000130640.1 incFII family plasmid replication initiator RepA -
JMX06_RS25595 () 31049..31189 + 141 WP_001333237.1 hypothetical protein -
JMX06_RS25600 () 31287..31940 + 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
JMX06_RS25605 () 32033..32290 + 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
JMX06_RS25610 () 32223..32624 + 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
JMX06_RS25615 () 32720..33424 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
JMX06_RS25620 () 33436..34917 - 1482 WP_024210412.1 IS91 family transposase ISVsa3 Transposase
JMX06_RS25625 () 35144..35485 - 342 WP_023909256.1 60 kDa chaperonin VF
JMX06_RS25630 () 35446..35895 - 450 WP_013362817.1 hypothetical protein -
JMX06_RS25635 () 36410..36580 - 171 WP_170852050.1 rRNA adenine methyltransferase -
JMX06_RS25640 () 36525..37262 - 738 WP_013362818.1 rRNA adenine N-6-methyltransferase ARG
JMX06_RS25645 () 37388..37483 - 96 WP_013362819.1 23S rRNA methyltransferase attenuation leader peptide -
JMX06_RS25650 () 37618..38322 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
JMX06_RS25655 () 38444..39349 + 906 WP_000219391.1 hypothetical protein ARG
JMX06_RS25660 () 39346..40584 + 1239 WP_000004159.1 MFS transporter -
JMX06_RS25665 () 40584..41168 + 585 WP_001137892.1 TetR family transcriptional regulator -
JMX06_RS25670 () 41661..42425 - 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
JMX06_RS25675 () 42543..42608 - 66 Protein_55 EAL domain-containing protein -
JMX06_RS25680 () 42652..42957 - 306 WP_000130000.1 Transcriptional regulator Relaxase
JMX06_RS25685 () 42968..44173 - 1206 WP_000184001.1 chromate efflux transporter -
JMX06_RS25690 () 44401..45405 + 1005 WP_000427619.1 IS110 family transposase IS5075 Transposase
JMX06_RS25695 () 45587..45790 - 204 WP_064765192.1 hypothetical protein -
JMX06_RS25700 () 45987..46826 - 840 WP_000259031.1 Dihydropteroate synthase ARG
JMX06_RS25705 () 46820..47167 - 348 WP_000679427.1 Multidrug transporter EmrE ARG
JMX06_RS25710 () 47331..48122 - 792 WP_001206356.1 Streptomycin 3''-adenylyltransferase ARG
JMX06_RS25715 () 48128..48418 - 291 WP_001336345.1 DUF1010 domain-containing protein -
JMX06_RS25720 () 48530..49027 - 498 WP_001083725.1 IS1595 family transposase ISSsu9 ARG
JMX06_RS25725 () 49172..49471 + 300 Protein_65 60 kDa chaperonin VF
JMX06_RS25730 () 49472..49825 + 354 Protein_66 60 kDa chaperonin VF
JMX06_RS25735 () 50052..51584 + 1533 WP_001747814.1 IS91 family transposase ISVsa3 Transposase
JMX06_RS25740 () 51841..52209 + 369 WP_024475255.1 mechanosensitive ion channel -
JMX06_RS25745 () 52237..53772 - 1536 WP_064760451.1 fluoroquinolone efflux MFS transporter QepA4 ARG
JMX06_RS25750 () 54167..55180 + 1014 WP_000845039.1 IS91 family transposase ISAzo26 Transposase
JMX06_RS25755 () 55383..55733 + 351 WP_000454193.1 DUF3330 domain-containing protein -
JMX06_RS25760 () 55859..56419 + 561 WP_000147567.1 Tn3 family transposase TnpR_TnAs3 Transposase
JMX06_RS25765 () 56422..59388 + 2967 WP_201525335.1 Tn3 family transposase TnpA_TnAs3 Transposase
JMX06_RS25770 () 59467..60471 + 1005 WP_000427619.1 IS110 family transposase IS5075 Transposase
JMX06_RS25775 () 60782..61159 + 378 WP_000656305.1 GNAT family N-acetyltransferase -
JMX06_RS25780 () 61360..62019 - 660 WP_000412211.1 Chloramphenicol acetyltransferase ARG
JMX06_RS25785 () 62298..62995 + 698 Protein_77 IS1 family transposase IS1R Transposase
JMX06_RS25790 () 62992..63255 + 264 WP_049802299.1 antibiotic biosynthesis monooxygenase -
JMX06_RS25795 () 63248..63634 + 387 WP_000460651.1 hypothetical protein -
JMX06_RS25800 () 63642..64328 + 687 WP_001284954.1 winged helix-turn-helix domain-containing protein -
JMX06_RS25805 () 64306..64929 - 624 WP_000088605.1 Tetracycline repressor protein class B from transposon Tn10 VF
JMX06_RS25810 () 65011..66216 + 1206 WP_001089068.1 Tetracycline resistance protein, class B ARG
JMX06_RS25815 () 66329..66922 - 594 WP_000428546.1 tetracyline resistance-associated transcriptional repressor TetC -
JMX06_RS25820 () 67081..67778 - 698 Protein_84 IS1 family transposase IS1X2 Transposase
JMX06_RS25825 () 67978..68091 + 114 Protein_85 IS6 family transposase IS15DI Transposase
JMX06_RS25830 () 68241..68399 + 159 WP_000449408.1 DsbA family protein -
JMX06_RS25835 () 68389..68895 + 507 WP_000949452.1 protein disulfide oxidoreductase -
JMX06_RS25840 () 69078..69893 + 816 WP_012372823.1 Na(+)-translocating NADH-quinone reductase subunit C -
JMX06_RS25845 () 70240..72126 + 1887 WP_000118029.1 FTR1 family iron permease -
JMX06_RS25850 () 72167..72694 + 528 WP_000178050.1 iron transporter -
JMX06_RS25855 () 72798..74177 + 1380 WP_000119836.1 DUF2318 domain-containing protein -
JMX06_RS25860 () 74180..75463 + 1284 WP_000964653.1 ABC transporter permease -
JMX06_RS25865 () 75453..76583 + 1131 WP_000729220.1 ABC transporter permease -
JMX06_RS25870 () 76588..77283 + 696 WP_000117262.1 Lipoprotein-releasing system ATP-binding protein LolD VF
JMX06_RS25875 () 77270..77755 + 486 WP_001267177.1 TlpA family protein disulfide reductase -
JMX06_RS25880 () 77780..78265 + 486 WP_000874189.1 hypothetical protein -
JMX06_RS25885 () 78387..78917 + 531 Protein_97 histidine-type phosphatase -
JMX06_RS25890 () 78975..79679 - 705 WP_001067834.1 IS6 family transposase IS26 Transposase
JMX06_RS25895 () 79747..81432 - 1686 Protein_99 Multifunctional conjugation protein TraI Relaxase
JMX06_RS25900 () 81432..83621 - 2190 WP_024946705.1 type IV conjugative transfer system coupling protein TraD -
JMX06_RS25905 () 83618..84397 - 780 WP_000199914.1 hypothetical protein -
JMX06_RS25910 () 84600..85331 - 732 WP_000850429.1 complement resistance protein TraT -
JMX06_RS25915 () 85363..85860 - 498 WP_000605862.1 entry exclusion protein -
JMX06_RS25920 () 85879..88698 - 2820 WP_001007062.1 conjugal transfer mating pair stabilization protein TraG -
JMX06_RS25925 () 88695..90068 - 1374 WP_000944328.1 conjugal transfer protein TraH -
JMX06_RS25930 () 90055..90480 - 426 WP_001348758.1 F-type conjugal transfer protein TrbF -
JMX06_RS25935 () 90428..90775 - 348 WP_071571857.1 P-type conjugative transfer protein TrbJ -
JMX06_RS25940 () 90705..91250 - 546 WP_000059829.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
JMX06_RS25945 () 91237..91521 - 285 WP_001617873.1 type-F conjugative transfer system pilin chaperone TraQ -
JMX06_RS25950 () 91648..91968 - 321 WP_001348757.1 conjugal transfer protein TrbA -
JMX06_RS25955 () 92016..92713 - 698 Protein_111 IS1 family transposase IS1G Transposase
JMX06_RS25960 () 92828..93430 + 603 WP_000243712.1 hypothetical protein VF
JMX06_RS25965 () 93727..94548 - 822 WP_001234469.1 DUF945 domain-containing protein -
JMX06_RS25970 () 94667..94954 - 288 WP_000107535.1 hypothetical protein -
JMX06_RS25975 () 94979..95185 - 207 WP_000275859.1 hypothetical protein -
JMX06_RS25980 () 95098..95433 - 336 WP_013023876.1 hypothetical protein -
JMX06_RS25985 () 96157..97824 + 1668 WP_001091724.1 group II intron reverse transcriptase/maturase -
JMX06_RS25990 () 98219..98377 - 159 WP_001312861.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 98421..98548 - 128 NuclAT_0 - Antitoxin Detail
- () 98421..98548 - 128 NuclAT_0 - Antitoxin Detail
- () 98421..98548 - 128 NuclAT_0 - Antitoxin Detail
- () 98421..98548 - 128 NuclAT_0 - Antitoxin Detail
- () 99990..100092 - 103 NuclAT_1 - -
- () 99990..100092 - 103 NuclAT_1 - -
- () 99990..100092 - 103 NuclAT_1 - -
- () 99990..100092 - 103 NuclAT_1 - -
JMX06_RS26000 () 100104..100823 - 720 WP_001276232.1 plasmid SOS inhibition protein A -
JMX06_RS26005 () 100820..101254 - 435 WP_000845940.1 conjugation system SOS inhibitor PsiB -
JMX06_RS26010 () 101309..103267 - 1959 WP_000117179.1 ParB/RepB/Spo0J family partition protein -
JMX06_RS26015 () 103333..103566 - 234 WP_000005990.1 DUF905 family protein -
JMX06_RS26020 () 103629..104126 - 498 WP_042045560.1 single-stranded DNA-binding protein -
JMX06_RS26025 () 104276..106177 - 1902 WP_000936285.1 group II intron reverse transcriptase/maturase -
JMX06_RS26030 () 106974..107309 - 336 WP_013023883.1 hypothetical protein -
JMX06_RS26035 () 108033..109700 + 1668 WP_001091724.1 group II intron reverse transcriptase/maturase -
JMX06_RS26040 () 109815..110033 - 219 WP_001496291.1 hypothetical protein -
JMX06_RS26045 () 110059..110622 - 564 WP_001348621.1 class I SAM-dependent methyltransferase -
JMX06_RS26050 () 110670..112031 - 1362 WP_000170714.1 DUF3560 domain-containing protein -
JMX06_RS26055 () 112083..112313 - 231 WP_000218642.1 hypothetical protein -
JMX06_RS26060 () 112827..113075 + 249 WP_071556315.1 hypothetical protein -
JMX06_RS26065 () 113710..115377 + 1668 WP_001091724.1 group II intron reverse transcriptase/maturase -
JMX06_RS26070 () 115691..115882 - 192 WP_001027516.1 hypothetical protein -
JMX06_RS26075 () 115879..116301 - 423 WP_000271753.1 DUF1380 family protein -
JMX06_RS26080 () 116348..116650 - 303 WP_001671341.1 antirestriction protein -
JMX06_RS26085 () 117190..117966 - 777 WP_001753849.1 hypothetical protein -
JMX06_RS26090 () 118017..118451 - 435 WP_000274437.1 DUF1380 family protein -
JMX06_RS26095 () 118465..118686 - 222 WP_001104873.1 hypothetical protein -
JMX06_RS26100 () 118687..119370 - 684 WP_000086185.1 DNA methylase -
JMX06_RS26105 () 119447..119751 - 305 Protein_141 hypothetical protein -
JMX06_RS26110 () 119755..120657 - 903 WP_001348615.1 DUF1281 domain-containing protein -
JMX06_RS26115 () 121395..122366 - 972 WP_000817036.1 ParB/RepB/Spo0J family plasmid partition protein -
JMX06_RS26120 () 122366..123532 - 1167 WP_000772446.1 hypothetical protein VF
JMX06_RS26125 () 124120..124875 - 756 WP_024946706.1 replication initiation protein RepE -
JMX06_RS26130 () 125649..126455 - 807 WP_000016982.1 site-specific integrase -
JMX06_RS26135 () 126456..126761 - 306 WP_001159868.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
JMX06_RS26140 () 126763..126981 - 219 WP_000813634.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
JMX06_RS26145 () 127548..128060 + 513 WP_000151784.1 hypothetical protein -
JMX06_RS26150 () 128094..129227 - 1134 WP_001542067.1 DUF3800 domain-containing protein -
JMX06_RS26155 () 129394..130167 - 774 WP_000905949.1 hypothetical protein -
JMX06_RS26160 () 130180..130680 - 501 WP_000528931.1 hypothetical protein -
JMX06_RS26165 () 130945..131175 + 231 WP_001261278.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
JMX06_RS26170 () 131172..131588 + 417 WP_001034046.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
JMX06_RS26175 () 131633..135427 - 3795 WP_001144732.1 hypothetical protein -
JMX06_RS26180 () 135808..136038 + 231 WP_001261286.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
JMX06_RS26185 () 136035..136451 + 417 WP_001034044.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
JMX06_RS26190 () 136526..138091 + 1566 WP_001128474.1 AAA family ATPase -
JMX06_RS26195 () 138076..139098 + 1023 WP_000361402.1 helicase UvrD -
JMX06_RS26200 () 139352..140049 - 698 Protein_160 IS1 family transposase IS1S Transposase
JMX06_RS26205 () 140405..141319 + 915 WP_000949004.1 putative periplasmic iron-binding protein VF
JMX06_RS26210 () 141319..142146 + 828 WP_000983710.1 Manganese transport system ATP-binding protein MntB VF
JMX06_RS26215 () 142143..143000 + 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
JMX06_RS26220 () 142997..143854 + 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
JMX06_RS26225 () 144088..144345 - 258 Protein_165 Tn3 family transposase -
JMX06_RS26230 () 144343..144756 + 414 Protein_166 phosphopyruvate hydratase -
JMX06_RS26235 () 145097..145477 + 381 WP_001318207.1 fluoride efflux transporter CrcB -
JMX06_RS26240 () 145857..147050 - 1194 WP_000095526.1 MFS transporter -
JMX06_RS26245 () 147186..148910 + 1725 WP_000602863.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
JMX06_RS26250 () 148911..149858 + 948 WP_000011908.1 N(6)-hydroxylysine O-acetyltransferase VF
JMX06_RS26255 () 149858..151600 + 1743 WP_001015721.1 Aerobactin synthase VF
JMX06_RS26260 () 151597..152874 + 1278 WP_000750130.1 L-lysine N6-monooxygenase VF
JMX06_RS26265 () 152956..155157 + 2202 WP_000973519.1 Ferric aerobactin receptor VF
JMX06_RS26270 () 155537..156234 + 698 Protein_174 IS1 family transposase IS1S Transposase
JMX06_RS26275 () 156414..156927 - 514 Protein_175 DUF4113 domain-containing protein -
JMX06_RS26280 () 156988..157092 - 105 Protein_176 AAA family ATPase -
JMX06_RS26285 () 157094..157417 - 324 Protein_177 IS21 family transposase IS21 Transposase

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance