MGE detailed information
MGE type: Prophage MGE length: 55650 bp
Accession: NZ_LC127084 Location: 2595957..2651606 Organism: Edwardsiella tarda strain ET-1 Replicon: chromosome
Accession: NZ_LC127084 Location: 2595957..2651606 Organism: Edwardsiella tarda strain ET-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAMD00131843_RS11895 () | 2591382..2592128 | - | 747 | WP_080514650.1 | invasin family protein | - |
| SAMD00131843_RS11900 () | 2592222..2594474 | - | 2253 | WP_012849853.1 | inverse autotransporter beta domain-containing protein | - |
| SAMD00131843_RS11905 () | 2594597..2595715 | - | 1119 | WP_012849854.1 | hypothetical protein | - |
| SAMD00131843_RS11910 () | 2595957..2596586 | - | 630 | WP_071818539.1 | Tyrosine recombinase XerD | VF |
| SAMD00131843_RS11915 () | 2597296..2597854 | - | 559 | Protein_2289 | tyrosine-type recombinase/integrase | - |
| SAMD00131843_RS11920 () | 2598057..2598806 | + | 750 | WP_109745956.1 | winged helix-turn-helix domain-containing protein | - |
| SAMD00131843_RS11925 () | 2598803..2599291 | + | 489 | WP_012849861.1 | hypothetical protein | - |
| SAMD00131843_RS11930 () | 2599561..2599695 | + | 135 | WP_015683480.1 | transposase | - |
| SAMD00131843_RS11935 () | 2600204..2604156 | - | 3953 | Protein_2293 | hypothetical protein | VF |
| SAMD00131843_RS11945 () | 2606126..2606896 | + | 771 | WP_012849867.1 | N-acetylmuramoyl-L-alanine amidase | - |
| SAMD00131843_RS11950 () | 2606962..2607531 | + | 570 | WP_012849868.1 | chorismate mutase | - |
| SAMD00131843_RS11955 () | 2608686..2609240 | + | 555 | WP_012849870.1 | hypothetical protein | - |
| SAMD00131843_RS11960 () | 2609548..2610306 | - | 759 | WP_012849871.1 | IS4 family transposase | - |
| SAMD00131843_RS11965 () | 2610367..2611149 | - | 783 | WP_012846920.1 | IS21 family transposase ISSen8 | Transposase |
| SAMD00131843_RS11970 () | 2611146..2612168 | - | 1023 | WP_012846921.1 | IS21 family transposase ISSen8 | Transposase |
| SAMD00131843_RS11975 () | 2612182..2612592 | - | 411 | WP_049761400.1 | hypothetical protein | - |
| SAMD00131843_RS11980 () | 2612611..2613210 | - | 600 | WP_012849881.1 | 3'-5' exonuclease | - |
| SAMD00131843_RS11985 () | 2613277..2613888 | - | 612 | WP_041692546.1 | hypothetical protein | - |
| SAMD00131843_RS11990 () | 2614350..2614736 | - | 387 | WP_041692545.1 | DUF1870 family protein | - |
| SAMD00131843_RS12000 () | 2615369..2616025 | - | 657 | WP_041692544.1 | hypothetical protein | - |
| SAMD00131843_RS12005 () | 2616018..2616986 | - | 969 | WP_012849876.1 | hypothetical protein | - |
| SAMD00131843_RS12010 () | 2616995..2617741 | - | 747 | WP_041692543.1 | hypothetical protein | - |
| SAMD00131843_RS12015 () | 2617734..2618540 | - | 807 | WP_049761396.1 | hypothetical protein | - |
| SAMD00131843_RS12020 () | 2618537..2618722 | - | 186 | WP_012849873.1 | hypothetical protein | - |
| SAMD00131843_RS12025 () | 2618820..2620631 | + | 1812 | Protein_2309 | toprim domain-containing protein | - |
| SAMD00131843_RS12030 () | 2621114..2621503 | + | 390 | Protein_2310 | hypothetical protein | - |
| SAMD00131843_RS12035 () | 2621530..2622552 | + | 1023 | WP_012846921.1 | IS21 family transposase ISSen8 | Transposase |
| SAMD00131843_RS12040 () | 2622549..2623331 | + | 783 | WP_012846920.1 | IS21 family transposase ISSen8 | Transposase |
| SAMD00131843_RS12045 () | 2623781..2624020 | + | 240 | WP_012849883.1 | hypothetical protein | - |
| SAMD00131843_RS12050 () | 2624059..2626497 | + | 2439 | WP_012849884.1 | type I restriction-modification system subunit M | - |
| SAMD00131843_RS12055 () | 2626509..2627834 | + | 1326 | WP_012849885.1 | restriction endonuclease subunit S | - |
| SAMD00131843_RS12060 () | 2627839..2628414 | + | 576 | WP_012849886.1 | DUF4433 domain-containing protein | - |
| SAMD00131843_RS12065 () | 2628417..2629073 | + | 657 | WP_012849887.1 | DUF4433 domain-containing protein | Toxin Detail |
| SAMD00131843_RS12070 () | 2629070..2630137 | + | 1068 | WP_012849888.1 | macro domain-containing protein | Antitoxin Detail |
| SAMD00131843_RS12075 () | 2630301..2633396 | + | 3096 | WP_012849889.1 | HsdR family type I site-specific deoxyribonuclease | - |
| SAMD00131843_RS12080 () | 2633396..2634112 | + | 717 | WP_012849890.1 | M48 family metallopeptidase | - |
| SAMD00131843_RS12085 () | 2634357..2634824 | + | 468 | Protein_2321 | IS4 family transposase ISGvi2 | Transposase |
| SAMD00131843_RS12090 () | 2634910..2635707 | + | 798 | Protein_2322 | IS21 family transposase ISSen8 | Transposase |
| SAMD00131843_RS12095 () | 2635944..2636159 | - | 216 | WP_012849893.1 | Major pilu subunit operon regulatory protein PapB | VF |
| SAMD00131843_RS12100 () | 2636171..2636434 | - | 264 | WP_041692548.1 | DUF2442 domain-containing protein | - |
| SAMD00131843_RS12105 () | 2636394..2636633 | - | 240 | WP_012849894.1 | DUF4160 domain-containing protein | - |
| SAMD00131843_RS12110 () | 2637127..2637723 | + | 597 | WP_071818540.1 | helix-turn-helix domain-containing protein | - |
| SAMD00131843_RS12115 () | 2637817..2638086 | + | 270 | WP_041692549.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| SAMD00131843_RS12120 () | 2638083..2638616 | + | 534 | WP_041692550.1 | GNAT family N-acetyltransferase | Toxin Detail |
| SAMD00131843_RS12125 () | 2638714..2639457 | - | 744 | WP_012849897.1 | hypothetical protein | - |
| SAMD00131843_RS12130 () | 2641455..2641706 | + | 252 | Protein_2330 | IS21 family transposase ISSen8 | Transposase |
| SAMD00131843_RS12135 () | 2641703..2642485 | + | 783 | WP_012846920.1 | IS21 family transposase ISSen8 | Transposase |
| SAMD00131843_RS12140 () | 2642590..2643393 | + | 804 | WP_012849899.1 | hypothetical protein | - |
| SAMD00131843_RS12145 () | 2643390..2643632 | + | 243 | WP_048591398.1 | ogr/Delta-like zinc finger family protein | - |
| SAMD00131843_RS12150 () | 2643649..2644224 | + | 576 | WP_012849900.1 | phage polarity suppression protein | - |
| SAMD00131843_RS12155 () | 2644486..2646153 | - | 1668 | WP_109913379.1 | hypothetical protein | - |
| SAMD00131843_RS12160 () | 2646202..2647299 | - | 1098 | WP_041692551.1 | DUF4297 domain-containing protein | - |
| SAMD00131843_RS12165 () | 2647453..2648715 | - | 1263 | WP_012849904.1 | Prophage integrase IntA ; Integrase | Integrase |
| SAMD00131843_RS12175 () | 2649206..2650126 | - | 921 | WP_012849905.1 | putative L,D-transpeptidase YbiS | VF |
| SAMD00131843_RS12185 () | 2650455..2651606 | + | 1152 | WP_012849907.1 | D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH | - |
| SAMD00131843_RS12190 () | 2651721..2652791 | - | 1071 | WP_012849908.1 | LPS export ABC transporter permease LptG | - |
| SAMD00131843_RS12195 () | 2652791..2653891 | - | 1101 | WP_012849909.1 | LPS export ABC transporter permease LptF | - |
| SAMD00131843_RS12200 () | 2654340..2655851 | + | 1512 | WP_012849910.1 | leucyl aminopeptidase | - |
| SAMD00131843_RS12205 () | 2656007..2656456 | + | 450 | WP_012849911.1 | DNA polymerase III subunit chi | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Edwardsiella tarda EIB202 | Prophage | TA24439, TA24440 | NC_013508 | 3201940..3257588 | 0 |