MGE detailed information
MGE type: Prophage MGE length: 43774 bp
Accession: NZ_LC127084 Location: 1093393..1137166 Organism: Edwardsiella tarda strain ET-1 Replicon: chromosome
Accession: NZ_LC127084 Location: 1093393..1137166 Organism: Edwardsiella tarda strain ET-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAMD00131843_RS05040 () | 1088924..1089196 | + | 273 | WP_015461416.1 | hypothetical protein | - |
| SAMD00131843_RS05045 () | 1089557..1090771 | - | 1215 | WP_071818553.1 | DUF1028 domain-containing protein | - |
| SAMD00131843_RS05050 () | 1091826..1092122 | - | 297 | WP_012848441.1 | antibiotic biosynthesis monooxygenase | - |
| SAMD00131843_RS05055 () | 1092164..1092559 | - | 396 | WP_041692507.1 | VOC family protein | - |
| SAMD00131843_RS05060 () | 1092780..1093109 | - | 330 | WP_197713303.1 | ribbon-helix-helix domain-containing protein | - |
| SAMD00131843_RS05065 () | 1093341..1093833 | - | 493 | Protein_968 | tyrosine-type recombinase/integrase | - |
| SAMD00131843_RS05070 () | 1094072..1095166 | - | 1095 | WP_012848444.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| SAMD00131843_RS05075 () | 1095153..1095401 | - | 249 | WP_015871361.1 | excisionase | - |
| SAMD00131843_RS05080 () | 1095477..1095758 | - | 282 | WP_012848446.1 | DNA breaking-rejoining protein | - |
| SAMD00131843_RS05090 () | 1095931..1097139 | + | 1209 | WP_012848447.1 | IS256 family transposase ISEic2 | Transposase |
| SAMD00131843_RS05100 () | 1097437..1098459 | + | 1023 | WP_012846921.1 | IS21 family transposase ISSen8 | Transposase |
| SAMD00131843_RS05105 () | 1098456..1099238 | + | 783 | WP_012846920.1 | IS21 family transposase ISSen8 | Transposase |
| SAMD00131843_RS05110 () | 1099289..1100176 | - | 888 | WP_080514632.1 | Rha family transcriptional regulator | - |
| SAMD00131843_RS05115 () | 1101110..1101985 | + | 876 | WP_012848450.1 | bacteriophage abortive infection AbiH family protein | - |
| SAMD00131843_RS05120 () | 1102526..1103170 | - | 645 | WP_012848452.1 | hypothetical protein | - |
| SAMD00131843_RS05125 () | 1103387..1103854 | - | 468 | WP_012848454.1 | hypothetical protein | - |
| SAMD00131843_RS05130 () | 1103884..1104033 | - | 150 | WP_012848453.1 | hypothetical protein | - |
| SAMD00131843_RS05140 () | 1104427..1105497 | - | 1071 | WP_012848456.1 | recombinase RecT | - |
| SAMD00131843_RS05145 () | 1105507..1107981 | - | 2475 | WP_012848457.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| SAMD00131843_RS05150 () | 1108082..1108384 | - | 303 | WP_012848458.1 | hypothetical protein | - |
| SAMD00131843_RS05155 () | 1108571..1108771 | + | 201 | WP_005286448.1 | hypothetical protein | - |
| SAMD00131843_RS05160 () | 1108790..1109035 | - | 246 | WP_041692508.1 | hypothetical protein | - |
| SAMD00131843_RS17475 () | 1109232..1109462 | + | 231 | WP_012848459.1 | hypothetical protein | - |
| SAMD00131843_RS05170 () | 1110555..1111133 | + | 579 | WP_041692510.1 | hypothetical protein | - |
| SAMD00131843_RS17320 () | 1111444..1114494 | - | 3051 | WP_012848461.1 | O-antigen polymerase | - |
| SAMD00131843_RS05180 () | 1115207..1115899 | - | 693 | WP_041692511.1 | helix-turn-helix transcriptional regulator | - |
| SAMD00131843_RS05185 () | 1116004..1116219 | + | 216 | WP_012848463.1 | helix-turn-helix domain-containing protein | - |
| SAMD00131843_RS05190 () | 1116317..1116673 | + | 357 | WP_012848464.1 | hypothetical protein | - |
| SAMD00131843_RS05195 () | 1116670..1116903 | + | 234 | WP_005286423.1 | hypothetical protein | - |
| SAMD00131843_RS05200 () | 1116935..1117186 | + | 252 | WP_012848465.1 | hypothetical protein | - |
| SAMD00131843_RS05210 () | 1117389..1118105 | + | 717 | Protein_993 | helix-turn-helix domain-containing protein | - |
| SAMD00131843_RS17480 () | 1118103..1118387 | + | 285 | Protein_994 | DUF1367 family protein | - |
| SAMD00131843_RS05215 () | 1118390..1118692 | + | 303 | WP_012848467.1 | DUF1364 domain-containing protein | - |
| SAMD00131843_RS05220 () | 1118981..1119226 | + | 246 | WP_012848468.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| SAMD00131843_RS05225 () | 1119114..1119482 | + | 369 | WP_196796969.1 | Txe/YoeB family addiction module toxin | - |
| SAMD00131843_RS05230 () | 1119565..1120077 | - | 513 | WP_012848469.1 | DUF2442 domain-containing protein | - |
| SAMD00131843_RS05235 () | 1120172..1120480 | - | 309 | WP_005286394.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| SAMD00131843_RS05240 () | 1120470..1120799 | - | 330 | WP_015871332.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SAMD00131843_RS05245 () | 1121220..1121867 | + | 648 | Protein_1001 | hypothetical protein | - |
| SAMD00131843_RS05250 () | 1122039..1122377 | + | 339 | WP_012848472.1 | phage holin, lambda family | - |
| SAMD00131843_RS05255 () | 1122380..1122931 | + | 552 | WP_012848473.1 | glycoside hydrolase family 108 protein | - |
| SAMD00131843_RS05260 () | 1123067..1123903 | + | 837 | WP_080514635.1 | antA/AntB antirepressor family protein | - |
| SAMD00131843_RS05265 () | 1124006..1124551 | + | 546 | WP_041692512.1 | DUF2514 family protein | - |
| SAMD00131843_RS05270 () | 1124908..1125684 | + | 777 | WP_012848476.1 | hypothetical protein | - |
| SAMD00131843_RS05275 () | 1125662..1126303 | + | 642 | Protein_1007 | terminase | - |
| SAMD00131843_RS17325 () | 1126387..1126572 | - | 186 | WP_012848478.1 | hypothetical protein | - |
| SAMD00131843_RS05285 () | 1126652..1128439 | + | 1788 | WP_197713304.1 | hypothetical protein | - |
| SAMD00131843_RS05295 () | 1128466..1129488 | + | 1023 | WP_012846921.1 | IS21 family transposase ISSen8 | Transposase |
| SAMD00131843_RS05300 () | 1129485..1130267 | + | 783 | WP_012846920.1 | IS21 family transposase ISSen8 | Transposase |
| SAMD00131843_RS17330 () | 1130474..1131745 | + | 1272 | Protein_1012 | hypothetical protein | - |
| SAMD00131843_RS17485 () | 1131749..1134991 | + | 3243 | Protein_1013 | hypothetical protein | - |
| - () | 1135038..1135148 | - | 111 | - | - | Antitoxin Detail |
| - () | 1135045..1135146 | + | 102 | - | - | Toxin Detail |
| SAMD00131843_RS05320 () | 1136162..1136719 | + | 558 | WP_012848483.1 | Outer membrane protein X | VF |
| SAMD00131843_RS05325 () | 1136807..1137166 | + | 360 | WP_012848484.1 | hypothetical protein | - |
| SAMD00131843_RS05330 () | 1137193..1137998 | - | 806 | Protein_1016 | hypothetical protein | - |
| SAMD00131843_RS05335 () | 1138071..1138544 | - | 474 | WP_012848486.1 | NifB/NifX family molybdenum-iron cluster-binding protein | - |
| SAMD00131843_RS05340 () | 1138555..1138833 | - | 279 | WP_015461422.1 | DUF134 domain-containing protein | - |
| SAMD00131843_RS05345 () | 1138891..1139514 | - | 624 | WP_012848489.1 | response regulator transcription factor | - |
| SAMD00131843_RS05350 () | 1139511..1141283 | - | 1773 | WP_012848490.1 | sensor histidine kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Edwardsiella tarda EIB202 | Prophage | TA10072, TA24429, TA24430 | NC_013508 | 1698905..1744957 | 0.001 |