MGE detailed information
MGE type: Prophage MGE length: 38324 bp
Accession: NZ_CP128261 Location: 2003650..2041973 Organism: Salmonella enterica subsp. enterica serovar Heidelberg isolate FT3-7B Replicon: chromosome
Accession: NZ_CP128261 Location: 2003650..2041973 Organism: Salmonella enterica subsp. enterica serovar Heidelberg isolate FT3-7B Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QR684_RS09540 () | 1999923..2000564 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| QR684_RS09545 () | 2000664..2001842 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| QR684_RS09550 () | 2001973..2002263 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| QR684_RS09555 () | 2002331..2002684 | + | 354 | WP_001042123.1 | protein YebF | - |
| QR684_RS09560 () | 2002778..2003437 | + | 660 | WP_000024707.1 | tellurite resistance TerB family protein | - |
| QR684_RS09565 () | 2003650..2005701 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| QR684_RS09570 () | 2005736..2006434 | - | 699 | WP_000944284.1 | exodeoxyribonuclease X | - |
| QR684_RS09575 () | 2006458..2007114 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| QR684_RS09580 () | 2007222..2007452 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| QR684_RS09585 () | 2007590..2007964 | + | 375 | WP_000168394.1 | CopC domain-containing protein YobA | - |
| QR684_RS09590 () | 2007965..2008840 | + | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| QR684_RS09595 () | 2008857..2009210 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2009312..2009455 | - | 144 | - | - | Antitoxin Detail |
| - | 2009350..2009453 | + | 104 | - | - | Toxin Detail |
| QR684_RS09600 () | 2009584..2010507 | - | 924 | Protein_1875 | hypothetical protein ; Integrase | Integrase |
| QR684_RS09605 () | 2010771..2011232 | - | 462 | Protein_1876 | DNA breaking-rejoining protein | - |
| QR684_RS09610 () | 2011221..2011412 | + | 192 | Protein_1877 | glycoside hydrolase family 19 protein | - |
| QR684_RS09615 () | 2011466..2011999 | + | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| QR684_RS09620 () | 2012256..2012423 | - | 168 | WP_000789529.1 | lytic enzyme | - |
| QR684_RS09625 () | 2012731..2012991 | + | 261 | Protein_1880 | DUF1441 family protein | - |
| QR684_RS09630 () | 2012993..2013208 | + | 216 | Protein_1881 | shikimate transporter | - |
| QR684_RS09635 () | 2013218..2013505 | + | 288 | Protein_1882 | macro domain-containing protein | - |
| QR684_RS09640 () | 2013518..2014029 | + | 512 | Protein_1883 | tail fiber assembly protein | - |
| QR684_RS09645 () | 2014126..2014326 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| QR684_RS09650 () | 2014716..2014896 | - | 181 | Protein_1885 | IS3 family transposase | - |
| QR684_RS09655 () | 2014896..2015021 | + | 126 | WP_000457876.1 | hypothetical protein | - |
| QR684_RS09660 () | 2015695..2015841 | + | 147 | Protein_1887 | helix-turn-helix domain-containing protein | - |
| QR684_RS09665 () | 2016168..2016782 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| QR684_RS09670 () | 2016792..2016950 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| QR684_RS09675 () | 2017083..2017997 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| QR684_RS09680 () | 2019318..2019740 | - | 423 | Protein_1891 | hypothetical protein ; Integrase | Integrase |
| QR684_RS09685 () | 2019810..2021004 | + | 1195 | Protein_1892 | IS256 family transposase IS285 | Transposase |
| QR684_RS09690 () | 2021150..2021290 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| QR684_RS09695 () | 2021456..2021725 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| QR684_RS09700 () | 2022095..2022514 | + | 420 | WP_000354407.1 | GNAT family N-acetyltransferase | - |
| QR684_RS09705 () | 2022901..2023377 | - | 477 | WP_000030935.1 | hypothetical protein | - |
| QR684_RS09710 () | 2023707..2024102 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| QR684_RS09715 () | 2024786..2025508 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| QR684_RS09720 () | 2025793..2025957 | + | 165 | WP_001134856.1 | membrane protein | - |
| QR684_RS09725 () | 2026181..2026831 | + | 651 | WP_000986357.1 | protein-serine/threonine phosphatase | - |
| QR684_RS09730 () | 2026850..2027041 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| QR684_RS09735 () | 2027152..2027388 | - | 237 | WP_024131108.1 | YebV family protein | - |
| QR684_RS09740 () | 2027506..2028945 | - | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| QR684_RS09745 () | 2029023..2031656 | - | 2634 | WP_001521100.1 | Intermembrane transport protein YebT | VF |
| QR684_RS09750 () | 2031625..2032908 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| QR684_RS09755 () | 2033037..2033534 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| QR684_RS09760 () | 2033632..2034318 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| QR684_RS09765 () | 2034338..2036386 | + | 2049 | WP_001091234.1 | carboxy terminal-processing peptidase | - |
| QR684_RS09770 () | 2036580..2037461 | + | 882 | WP_000984498.1 | protease HtpX | - |
| QR684_RS09775 () | 2037509..2038882 | - | 1374 | WP_000416131.1 | MFS transporter | - |
| QR684_RS09780 () | 2039058..2039849 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| QR684_RS09785 () | 2040061..2040300 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| QR684_RS09790 () | 2040458..2040601 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| QR684_RS09795 () | 2040672..2040959 | + | 288 | WP_001000660.1 | YebO family protein | - |
| QR684_RS09800 () | 2041608..2041751 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| QR684_RS09805 () | 2041764..2041973 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| QR684_RS09810 () | 2042193..2043938 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| QR684_RS09815 () | 2044004..2044813 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| QR684_RS09820 () | 2044810..2045376 | - | 567 | WP_001531552.1 | manganese efflux pump MntP | - |
| QR684_RS09825 () | 2045786..2046244 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0.003 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0.003 |