MGE detailed information

MGE type: Conjugative plasmid        MGE length: 156007 bp
Accession: NZ_CP127318        Location: 1..156007         Organism: Escherichia coli strain Ch1       Replicon: plasmid pCh101


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QRM71_RS26680 (QRM71_26680) 269..1030 - 762 WP_285978937.1 ribonuclease -
QRM71_RS26685 (QRM71_26685) 1213..1357 - 145 Protein_2 integrase core domain-containing protein -
QRM71_RS26690 (QRM71_26690) 1373..2538 - 1166 Protein_3 IS3 family transposase -
QRM71_RS26695 (QRM71_26695) 2597..2902 + 306 Protein_4 recombinase family protein -
QRM71_RS26700 (QRM71_26700) 3266..3814 + 549 WP_285978938.1 hypothetical protein -
QRM71_RS26705 (QRM71_26705) 4035..4316 - 282 WP_285978939.1 hypothetical protein -
QRM71_RS26710 (QRM71_26710) 4420..5648 + 1229 WP_269564372.1 IS3 family transposase IS2 Transposase
QRM71_RS26715 (QRM71_26715) 5799..5918 + 120 Protein_8 integrase core domain-containing protein -
QRM71_RS26720 (QRM71_26720) 6132..7352 - 1221 WP_285978940.1 hypothetical protein VF
QRM71_RS26725 (QRM71_26725) 7249..7818 - 570 WP_285978941.1 DUF4765 family protein -
QRM71_RS26730 (QRM71_26730) 7819..8370 - 552 WP_285978942.1 hypothetical protein VF
QRM71_RS26735 (QRM71_26735) 8380..9171 - 792 WP_285978943.1 Dermonecrotic toxin VF
QRM71_RS26740 (QRM71_26740) 10002..10409 - 408 WP_285978944.1 VapA/VapB family virulence-associated protein -
QRM71_RS26745 (QRM71_26745) 10977..11366 - 390 Protein_14 IS3 family transposase ISBmu11 Transposase
QRM71_RS26750 (QRM71_26750) 11942..12236 + 295 Protein_15 transposase -
QRM71_RS26755 (QRM71_26755) 12320..13369 - 1050 WP_285978945.1 hypothetical protein -
QRM71_RS26760 (QRM71_26760) 13679..13951 - 273 WP_285978951.1 type II toxin-antitoxin system toxin YacB Toxin Detail
QRM71_RS26765 (QRM71_26765) 13951..14220 - 270 WP_285978946.1 type II toxin-antitoxin system antitoxin YacA Antitoxin Detail
QRM71_RS26770 (QRM71_26770) 14616..15626 + 1011 WP_000487119.1 IS110 family transposase IS1663 Transposase
QRM71_RS26775 (QRM71_26775) 16204..16794 + 591 WP_000086535.1 Tn3 family transposase TnpR_ISSba14 Transposase
QRM71_RS26780 (QRM71_26780) 16841..16999 + 159 Protein_21 integrase core domain-containing protein -
QRM71_RS26785 (QRM71_26785) 17149..18146 + 998 Protein_22 ABC transporter substrate-binding protein -
QRM71_RS26790 (QRM71_26790) 18146..19183 + 1038 WP_000110580.1 Hemin transport system permease protein HmuU VF
QRM71_RS26795 (QRM71_26795) 19183..19944 + 762 WP_000020503.1 Fe(3+) dicitrate transport ATP-binding protein FecE VF
QRM71_RS26800 (QRM71_26800) 20001..21188 + 1188 WP_160348040.1 MFS transporter -
QRM71_RS26805 (QRM71_26805) 21281..22474 - 1194 Protein_26 IS3 family transposase IS629 Transposase
QRM71_RS26810 (QRM71_26810) 22621..26118 - 3498 WP_285978947.1 hypothetical protein VF
QRM71_RS26820 (QRM71_26820) 27640..29178 - 1539 WP_000997971.1 IS66 family transposase ISEc8 Transposase
QRM71_RS26825 (QRM71_26825) 29228..29575 - 348 Protein_30 IS66 family transposase ISEc8 Transposase
QRM71_RS26830 (QRM71_26830) 29572..29952 - 381 WP_001171554.1 IS66 family transposase ISEc8 Transposase
QRM71_RS26835 (QRM71_26835) 30499..30729 + 231 WP_001261278.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
QRM71_RS26840 (QRM71_26840) 30726..31142 + 417 WP_001034046.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
QRM71_RS26845 (QRM71_26845) 31367..31837 + 471 Protein_34 IS66 family transposase ISEc43 Transposase
QRM71_RS26850 (QRM71_26850) 31844..32119 + 276 Protein_35 recombinase family protein -
QRM71_RS26855 (QRM71_26855) 32573..33136 - 564 WP_062894304.1 pentapeptide repeat-containing protein -
QRM71_RS26860 (QRM71_26860) 33298..33984 - 687 Protein_37 IS1 family transposase IS1R Transposase
QRM71_RS26865 (QRM71_26865) 34013..34468 - 456 WP_062894303.1 hypothetical protein -
QRM71_RS26870 (QRM71_26870) 34649..35861 + 1213 Protein_39 IS3 family transposase IS629 Transposase
QRM71_RS26875 (QRM71_26875) 35906..36337 + 432 Protein_40 relaxase NikB -
QRM71_RS26880 (QRM71_26880) 36442..36526 + 85 Protein_41 hypothetical protein -
QRM71_RS26885 (QRM71_26885) 36796..37464 + 669 WP_103556657.1 cysteine hydrolase -
QRM71_RS26890 (QRM71_26890) 37470..38330 + 861 WP_001442105.1 DUF2877 domain-containing protein -
QRM71_RS26895 (QRM71_26895) 38425..39984 + 1560 WP_000865634.1 acyl-CoA synthetase FdrA -
QRM71_RS26900 (QRM71_26900) 39981..41405 + 1425 WP_053287902.1 DUF1116 domain-containing protein -
QRM71_RS26905 (QRM71_26905) 41398..42354 + 957 WP_062894335.1 carbamate kinase -
QRM71_RS26910 (QRM71_26910) 42371..42760 + 390 WP_001696803.1 hypothetical protein -
QRM71_RS26915 (QRM71_26915) 42783..44006 + 1224 WP_024188138.1 cytosine permease -
QRM71_RS26920 (QRM71_26920) 44084..44974 + 891 WP_000470711.1 putative HTH-type transcriptional regulator YahB VF
QRM71_RS26925 (QRM71_26925) 45408..45797 + 390 WP_062894334.1 cytochrome b562 -
QRM71_RS26930 (QRM71_26930) 46049..47037 + 989 Protein_51 hypothetical protein VF
QRM71_RS26935 (QRM71_26935) 47011..47508 + 498 WP_032297276.1 hypothetical protein VF
QRM71_RS26940 (QRM71_26940) 48160..48474 - 315 WP_000633742.1 hypothetical protein -
QRM71_RS26945 (QRM71_26945) 48532..49197 - 666 WP_000536047.1 ProQ/FINO family protein -
QRM71_RS26950 (QRM71_26950) 49300..49890 - 591 WP_103556655.1 hypothetical protein VF
QRM71_RS26955 (QRM71_26955) 49994..50281 - 288 WP_000222760.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
QRM71_RS26960 (QRM71_26960) 50278..50529 - 252 WP_001132900.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
QRM71_RS26965 (QRM71_26965) 50602..50792 - 191 Protein_58 hypothetical protein -
QRM71_RS26970 (QRM71_26970) 51485..52357 - 873 WP_000729438.1 incFII family plasmid replication initiator RepA -
QRM71_RS26975 (QRM71_26975) 53195..53701 + 507 WP_024187405.1 transcription termination/antitermination NusG family protein -
QRM71_RS26980 (QRM71_26980) 53842..54507 + 666 WP_021547664.1 hypothetical protein -
QRM71_RS26985 (QRM71_26985) 54862..55104 + 243 WP_059330908.1 PilI type IV pilus biogenesis protein -
QRM71_RS26990 (QRM71_26990) 55609..56004 - 396 WP_029391920.1 hypothetical protein -
QRM71_RS26995 (QRM71_26995) 56126..57196 + 1071 WP_029400129.1 hypothetical protein VF
QRM71_RS27000 (QRM71_27000) 57201..57638 + 438 WP_000539684.1 type IV pilus biogenesis protein PilM -
QRM71_RS27005 (QRM71_27005) 57669..59288 + 1620 WP_096990748.1 Outer membrane lipoprotein BfpB VF
QRM71_RS27010 (QRM71_27010) 59309..60604 + 1296 WP_058100834.1 type 4b pilus protein PilO2 -
QRM71_RS27015 (QRM71_27015) 60594..61046 + 453 WP_021547657.1 hypothetical protein VF
QRM71_RS27020 (QRM71_27020) 61095..61649 + 555 WP_072740733.1 hypothetical protein -
QRM71_RS27025 (QRM71_27025) 61745..62341 + 597 WP_103556623.1 hypothetical protein -
QRM71_RS27030 (QRM71_27030) 62438..63945 + 1508 Protein_71 hypothetical protein VF
QRM71_RS27035 (QRM71_27035) 63947..64645 + 699 WP_269550328.1 type II secretion system F family protein -
QRM71_RS27040 (QRM71_27040) 64669..65046 + 378 WP_285978948.1 hypothetical protein VF
QRM71_RS27045 (QRM71_27045) 65089..65631 + 543 WP_285978949.1 type 4 pilus major pilin -
QRM71_RS27050 (QRM71_27050) 65690..66166 + 477 WP_053287759.1 hypothetical protein VF
QRM71_RS27055 (QRM71_27055) 66126..66833 + 708 WP_153789788.1 A24 family peptidase -
QRM71_RS27060 (QRM71_27060) 66830..68167 + 1338 WP_260834050.1 hypothetical protein VF
QRM71_RS27065 (QRM71_27065) 68944..70113 + 1170 WP_065203201.1 site-specific integrase -
QRM71_RS27070 70278..70445 + 168 WP_244580556.1 hypothetical protein -
QRM71_RS27075 (QRM71_27075) 70537..70857 - 321 WP_000695052.1 hypothetical protein -
QRM71_RS27085 (QRM71_27085) 72467..73288 + 822 WP_021511762.1 hypothetical protein -
QRM71_RS27090 (QRM71_27090) 73390..74592 + 1203 WP_103556611.1 conjugal transfer protein TraF -
QRM71_RS27095 (QRM71_27095) 74732..74902 + 171 WP_001597011.1 hypothetical protein -
QRM71_RS27100 (QRM71_27100) 74951..75403 + 453 WP_001081199.1 DotD/TraH family lipoprotein -
QRM71_RS27105 (QRM71_27105) 75400..76236 + 837 WP_000848138.1 hypothetical protein VF
QRM71_RS27110 (QRM71_27110) 76220..77368 + 1149 WP_021532711.1 putative protein YggR VF
QRM71_RS27115 (QRM71_27115) 77365..77655 + 291 WP_000817799.1 hypothetical protein -
QRM71_RS27120 (QRM71_27120) 77719..81750 + 4032 WP_021532712.1 DUF5710 domain-containing protein -
QRM71_RS27125 (QRM71_27125) 81767..82117 + 351 WP_021532713.1 hypothetical protein -
QRM71_RS27130 (QRM71_27130) 82129..82824 + 696 WP_021532714.1 DotI/IcmL family type IV secretion protein -
QRM71_RS27135 (QRM71_27135) 82835..83809 + 975 WP_021532715.1 hypothetical protein VF
QRM71_RS27140 (QRM71_27140) 83813..85143 + 1331 Protein_93 conjugal transfer protein TraO -
QRM71_RS27145 (QRM71_27145) 85140..85853 + 714 WP_021532717.1 conjugal transfer protein TraP -
QRM71_RS27150 (QRM71_27150) 85850..86380 + 531 WP_000987022.1 conjugal transfer protein TraQ -
QRM71_RS27155 (QRM71_27155) 86427..86825 + 399 WP_021532718.1 hypothetical protein -
QRM71_RS27160 (QRM71_27160) 86882..87133 + 252 WP_021532719.1 hypothetical protein -
QRM71_RS27165 (QRM71_27165) 87225..87866 + 642 WP_021532720.1 hypothetical protein -
QRM71_RS27170 (QRM71_27170) 87921..88280 + 360 WP_000380400.1 hypothetical protein -
QRM71_RS27175 (QRM71_27175) 88277..88660 + 384 WP_011310086.1 hypothetical protein -
QRM71_RS27180 (QRM71_27180) 88836..91879 + 3044 Protein_101 hypothetical protein VF
QRM71_RS27185 (QRM71_27185) 91879..92496 + 618 WP_021532722.1 hypothetical protein -
QRM71_RS27190 (QRM71_27190) 92457..93662 + 1206 WP_052908626.1 conjugal transfer protein TraW -
QRM71_RS27195 (QRM71_27195) 93659..94228 + 570 WP_058100845.1 conjugal transfer protein TraX -
QRM71_RS27200 (QRM71_27200) 94301..96465 + 2165 Protein_105 DotA/TraY family protein -
QRM71_RS27205 (QRM71_27205) 96554..97204 + 651 WP_001044247.1 plasmid IncI1-type surface exclusion protein ExcA -
QRM71_RS27210 (QRM71_27210) 97831..97983 - 153 WP_001302699.1 Hok/Gef family protein -
QRM71_RS27215 (QRM71_27215) 98386..98577 + 192 WP_000751583.1 hypothetical protein -
QRM71_RS27220 (QRM71_27220) 98589..98957 + 369 WP_001302696.1 hypothetical protein -
QRM71_RS27225 (QRM71_27225) 98961..99175 + 215 Protein_110 hypothetical protein -
QRM71_RS27230 (QRM71_27230) 99373..99996 - 624 WP_062893917.1 hypothetical protein -
QRM71_RS27235 (QRM71_27235) 100156..100623 + 468 WP_096990622.1 thermonuclease family protein -
QRM71_RS27240 (QRM71_27240) 100774..100950 + 177 WP_032172741.1 hypothetical protein -
QRM71_RS27245 (QRM71_27245) 101013..101096 - 84 WP_271298668.1 DinQ-like type I toxin DqlB -
QRM71_RS27250 (QRM71_27250) 101407..102723 + 1317 WP_182497291.1 IncI1-type conjugal transfer protein TrbA -
QRM71_RS27255 (QRM71_27255) 102720..103838 + 1119 WP_285978933.1 DsbC family protein -
QRM71_RS27260 (QRM71_27260) 103819..105948 + 2130 Protein_117 F-type conjugative transfer protein TrbC -
QRM71_RS27265 (QRM71_27265) 106380..106565 - 186 Protein_118 IS256 family transposase -
QRM71_RS27270 (QRM71_27270) 106620..107813 + 1194 Protein_119 IS3 family transposase IS629 Transposase
QRM71_RS27275 (QRM71_27275) 109539..110725 + 1187 Protein_120 IS3 family transposase IS2 Transposase
QRM71_RS27280 (QRM71_27280) 110906..111151 + 246 WP_045148228.1 hypothetical protein -
QRM71_RS27285 (QRM71_27285) 111238..111696 + 459 Protein_122 IS256 family transposase IS1414 Transposase
QRM71_RS27290 (QRM71_27290) 111739..112932 - 1194 Protein_123 IS3 family transposase IS629 Transposase
QRM71_RS27295 (QRM71_27295) 112987..113172 + 186 Protein_124 IS256 family transposase -
QRM71_RS27300 (QRM71_27300) 113208..113552 - 345 WP_032354044.1 type II toxin-antitoxin system PemK/MazF family toxin -
QRM71_RS27305 (QRM71_27305) 113552..113800 - 249 WP_033810804.1 cell growth regulatory protein MazE -
QRM71_RS27310 (QRM71_27310) 113869..116571 - 2703 WP_033810803.1 hypothetical protein Relaxase
QRM71_RS27315 (QRM71_27315) 116583..116915 - 333 WP_001291056.1 plasmid mobilization protein MobA -
QRM71_RS27320 (QRM71_27320) 117148..117483 + 336 WP_000157095.1 molybdopterin-guanine dinucleotide biosynthesis protein MobC -
QRM71_RS27325 (QRM71_27325) 117569..118417 - 849 WP_096996190.1 DUF4942 domain-containing protein -
QRM71_RS27330 (QRM71_27330) 118661..118963 + 303 WP_215416443.1 hypothetical protein -
QRM71_RS27335 (QRM71_27335) 118997..119248 + 252 WP_000148286.1 helix-turn-helix transcriptional regulator -
QRM71_RS27340 (QRM71_27340) 119279..119524 - 246 WP_012605149.1 hypothetical protein -
QRM71_RS27345 (QRM71_27345) 119524..120498 - 975 WP_097416732.1 ISNCY family transposase ISRor2 VF
QRM71_RS27350 (QRM71_27350) 120563..120829 - 267 WP_001247861.1 hypothetical protein -
QRM71_RS27355 (QRM71_27355) 120921..121361 - 441 WP_097742507.1 post-segregation killing protein PndC -
QRM71_RS27360 (QRM71_27360) 121713..121781 + 69 Protein_137 pilus protein -
QRM71_RS27365 (QRM71_27365) 122092..122592 - 501 WP_000117633.1 antirestriction protein ArdA -
QRM71_RS27370 (QRM71_27370) 123057..123653 - 597 WP_096990803.1 hypothetical protein -
QRM71_RS27375 (QRM71_27375) 123660..124334 - 675 WP_103556635.1 plasmid SOS inhibition protein A -
QRM71_RS27380 (QRM71_27380) 124374..124808 - 435 WP_097416730.1 conjugation system SOS inhibitor PsiB -
QRM71_RS27385 (QRM71_27385) 124863..126821 - 1959 WP_285978934.1 ParB/RepB/Spo0J family partition protein -
QRM71_RS27390 (QRM71_27390) 126885..127118 - 234 WP_021534894.1 DUF905 domain-containing protein -
QRM71_RS27395 (QRM71_27395) 127176..127703 - 528 WP_029391983.1 single-stranded DNA-binding protein -
QRM71_RS27400 (QRM71_27400) 128071..128139 + 69 Protein_145 pilus protein -
QRM71_RS27405 (QRM71_27405) 128473..128664 - 192 WP_274827262.1 hypothetical protein -
QRM71_RS27410 (QRM71_27410) 128661..129083 - 423 WP_072643650.1 DUF1380 family protein -
QRM71_RS27415 (QRM71_27415) 129130..129555 - 426 WP_001198900.1 antirestriction protein -
QRM71_RS27420 (QRM71_27420) 129971..130747 - 777 Protein_149 hypothetical protein -
QRM71_RS27425 (QRM71_27425) 130798..131316 - 519 WP_224471673.1 DUF1380 family protein -
QRM71_RS27430 (QRM71_27430) 131246..131467 - 222 WP_097416728.1 hypothetical protein -
QRM71_RS27435 (QRM71_27435) 131468..132151 - 684 WP_097416727.1 DNA methylase -
QRM71_RS27440 (QRM71_27440) 132228..132531 - 304 Protein_153 hypothetical protein -
QRM71_RS27445 (QRM71_27445) 132535..133437 - 903 WP_097416734.1 DUF1281 domain-containing protein -
QRM71_RS27450 (QRM71_27450) 133855..134103 + 249 WP_097416725.1 DinI-like family protein -
QRM71_RS27455 (QRM71_27455) 134100..134537 + 438 WP_285978935.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
QRM71_RS27460 (QRM71_27460) 134537..135397 + 861 Protein_157 translesion error-prone DNA polymerase V subunit UmuC -
QRM71_RS27465 (QRM71_27465) 135449..136126 + 678 WP_103556643.1 IS66 family transposase ISCro1 Transposase
QRM71_RS27470 (QRM71_27470) 136126..136473 + 348 WP_000624618.1 IS66 family transposase ISCro1 Transposase
QRM71_RS27475 (QRM71_27475) 136493..138064 + 1572 WP_103556644.1 IS66 family transposase ISCro1 Transposase
QRM71_RS27480 (QRM71_27480) 138203..142317 + 4115 Protein_161 Temperature-sensitive hemagglutinin tsh autotransporter VF
QRM71_RS27485 (QRM71_27485) 142882..144420 - 1539 WP_000997971.1 IS66 family transposase ISEc8 Transposase
QRM71_RS27490 (QRM71_27490) 144470..144817 - 348 Protein_163 IS66 family transposase ISEc8 Transposase
QRM71_RS27495 (QRM71_27495) 144814..145194 - 381 WP_001171554.1 IS66 family transposase ISEc8 Transposase
QRM71_RS27500 (QRM71_27500) 145288..145710 + 423 Protein_165 DUF4113 domain-containing protein -
QRM71_RS27505 (QRM71_27505) 145712..146128 - 417 WP_001278818.1 plasmid partitioning/stability family protein -
QRM71_RS27510 (QRM71_27510) 146121..147101 - 981 WP_285978936.1 plasmid segregation protein ParM -
QRM71_RS27515 (QRM71_27515) 147515..147823 - 309 WP_000048808.1 hypothetical protein -
QRM71_RS27520 (QRM71_27520) 147910..148554 - 645 WP_001144036.1 ParA family protein -
QRM71_RS27525 (QRM71_27525) 148734..149513 - 780 WP_097416723.1 site-specific integrase -
QRM71_RS27530 (QRM71_27530) 149515..149928 - 414 WP_097416722.1 hypothetical protein -
QRM71_RS27535 (QRM71_27535) 150527..150757 + 231 WP_001261286.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
QRM71_RS27540 (QRM71_27540) 150754..151170 + 417 WP_001034044.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
QRM71_RS27545 (QRM71_27545) 151245..152809 + 1565 Protein_174 AAA family ATPase -
QRM71_RS27550 (QRM71_27550) 152794..153815 + 1022 Protein_175 DNA helicase UvrD -
QRM71_RS27555 (QRM71_27555) 154069..154755 - 687 Protein_176 IS1 family transposase IS1R Transposase
QRM71_RS27560 (QRM71_27560) 154812..155754 - 943 Protein_177 IS481 family transposase ISKpn28 Transposase

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance