MGE detailed information
MGE type: Conjugative plasmid MGE length: 114529 bp
Accession: NZ_CP127254 Location: 1..114529 Organism: Escherichia coli strain C41 Replicon: plasmid pC4101
Accession: NZ_CP127254 Location: 1..114529 Organism: Escherichia coli strain C41 Replicon: plasmid pC4101
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQ971_RS24695 (106) | 106..627 | + | 522 | WP_000632670.1 | conjugal transfer entry exclusion protein TraS | - |
| QQ971_RS24700 (652) | 652..1383 | + | 732 | WP_000850422.1 | conjugal transfer complement resistance protein TraT | - |
| QQ971_RS24705 (1636) | 1636..3789 | + | 2154 | WP_286004812.1 | type IV conjugative transfer system coupling protein TraD | - |
| QQ971_RS24710 (3798) | 3798..4196 | - | 399 | WP_000911324.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QQ971_RS24715 (4196) | 4196..4423 | - | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| QQ971_RS24720 (4505) | 4505..9775 | + | 5271 | WP_112042320.1 | Multifunctional conjugation protein TraI | Relaxase |
| QQ971_RS24725 (9795) | 9795..10541 | + | 747 | WP_000205776.1 | conjugal transfer pilus acetylase TraX | - |
| QQ971_RS24730 (10596) | 10596..11156 | + | 561 | WP_000139310.1 | fertility inhibition protein FinO | - |
| QQ971_RS24735 (11291) | 11291..11479 | + | 189 | WP_001490801.1 | hypothetical protein | - |
| QQ971_RS24740 (11677) | 11677..11763 | + | 87 | Protein_10 | endonuclease | - |
| QQ971_RS24745 (11944) | 11944..12255 | - | 312 | WP_000802277.1 | hypothetical protein | - |
| - (12551) | 12551..12612 | - | 62 | NuclAT_1 | - | - |
| - (12551) | 12551..12612 | - | 62 | NuclAT_1 | - | - |
| - (12551) | 12551..12612 | - | 62 | NuclAT_1 | - | - |
| - (12551) | 12551..12612 | - | 62 | NuclAT_1 | - | - |
| QQ971_RS24750 (12656) | 12656..12805 | + | 150 | WP_001312851.1 | Hok/Gef family protein | - |
| QQ971_RS24755 (13089) | 13089..13346 | + | 258 | WP_000083834.1 | replication regulatory protein RepA | - |
| QQ971_RS24760 (13580) | 13580..13654 | + | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| QQ971_RS24765 (13647) | 13647..14129 | + | 483 | WP_001443034.1 | hypothetical protein | - |
| QQ971_RS24770 (14122) | 14122..14979 | + | 858 | WP_000774302.1 | incFII family plasmid replication initiator RepA | - |
| QQ971_RS24775 (15836) | 15836..16849 | - | 1014 | WP_000109841.1 | sulfite reductase subunit C | - |
| QQ971_RS24780 (16860) | 16860..17678 | - | 819 | WP_024199078.1 | anaerobic sulfite reductase subunit AsrB | - |
| QQ971_RS24785 (17682) | 17682..18725 | - | 1044 | WP_000279211.1 | anaerobic sulfite reductase subunit AsrA | - |
| QQ971_RS24790 (19715) | 19715..20194 | - | 480 | WP_286004813.1 | HNH endonuclease domain-containing protein | - |
| QQ971_RS24795 (20191) | 20191..21423 | - | 1233 | WP_000582826.1 | AAA family ATPase | - |
| QQ971_RS24800 (22353) | 22353..22565 | - | 213 | WP_000064130.1 | hypothetical protein | - |
| QQ971_RS24805 (23073) | 23073..23690 | - | 618 | WP_000521605.1 | ProQ/FINO family protein | - |
| QQ971_RS24810 (23885) | 23885..25441 | - | 1557 | WP_286004814.1 | AAA family ATPase | - |
| QQ971_RS24815 (25706) | 25706..26296 | - | 591 | WP_000194578.1 | hypothetical protein | - |
| QQ971_RS24820 (26296) | 26296..26553 | - | 258 | WP_000371891.1 | hypothetical protein | - |
| QQ971_RS24825 (26907) | 26907..29045 | + | 2139 | WP_000350638.1 | AAA family ATPase | - |
| QQ971_RS24830 (29207) | 29207..29623 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QQ971_RS24835 (29620) | 29620..29850 | - | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| QQ971_RS24840 (30146) | 30146..30436 | + | 291 | WP_000111771.1 | hypothetical protein | - |
| QQ971_RS24845 (30426) | 30426..31325 | + | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| QQ971_RS24850 (31375) | 31375..33600 | - | 2226 | WP_000698737.1 | P-loop NTPase fold protein | - |
| QQ971_RS24855 (33712) | 33712..34305 | + | 594 | Protein_33 | IS21 family transposase IS21 | Transposase |
| QQ971_RS24860 (34370) | 34370..35152 | - | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| QQ971_RS24865 (35149) | 35149..36171 | - | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| QQ971_RS24870 (36259) | 36259..36843 | + | 585 | Protein_36 | IS21 family transposase IS21 | Transposase |
| QQ971_RS24875 (36843) | 36843..37640 | + | 798 | WP_000544799.1 | IS21 family transposase IS21 | Transposase |
| QQ971_RS24880 (37680) | 37680..38772 | - | 1093 | Protein_38 | IS91 family transposase ISEc37 | Transposase |
| QQ971_RS24885 (38735) | 38735..39067 | - | 333 | WP_032314074.1 | hypothetical protein | - |
| QQ971_RS24890 (39525) | 39525..40586 | - | 1062 | WP_047650192.1 | EAL domain-containing protein | - |
| QQ971_RS24895 (40696) | 40696..41109 | - | 414 | WP_001351580.1 | hypothetical protein | - |
| QQ971_RS24900 (41273) | 41273..41668 | - | 396 | WP_000491615.1 | polymer-forming cytoskeletal protein | - |
| QQ971_RS24905 (41843) | 41843..42256 | - | 414 | WP_000483319.1 | hypothetical protein | - |
| QQ971_RS24910 (42859) | 42859..43047 | - | 189 | WP_000131420.1 | hypothetical protein | - |
| QQ971_RS24915 (43723) | 43723..43920 | + | 198 | Protein_45 | IS66 family transposase ISCro1 | Transposase |
| QQ971_RS24920 (43912) | 43912..45342 | + | 1431 | Protein_46 | IS66 family transposase | - |
| QQ971_RS24925 (45424) | 45424..45597 | + | 174 | Protein_47 | IS3 family transposase | - |
| QQ971_RS24935 (47399) | 47399..48091 | - | 693 | WP_000286435.1 | hypothetical protein | - |
| QQ971_RS24940 (48840) | 48840..54116 | - | 5277 | WP_286004815.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| QQ971_RS24945 (54784) | 54784..58971 | - | 4188 | WP_225376159.1 | hypothetical protein | VF |
| QQ971_RS24950 (59620) | 59620..60566 | + | 947 | Protein_52 | Outer membrane protease OmpP | VF |
| QQ971_RS24955 (60659) | 60659..62158 | + | 1500 | WP_001263868.1 | alpha/beta hydrolase | - |
| QQ971_RS24960 (62662) | 62662..62793 | + | 132 | Protein_54 | serine/threonine protein kinase | - |
| QQ971_RS24965 (62914) | 62914..63654 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| QQ971_RS24970 (63939) | 63939..64916 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| QQ971_RS24975 (65563) | 65563..65847 | - | 285 | Protein_57 | IS3 family transposase ISKpn37 | Transposase |
| QQ971_RS24980 (65922) | 65922..66472 | + | 551 | Protein_58 | IS66 family transposase ISSfl3 | Transposase |
| QQ971_RS24985 (66472) | 66472..66735 | + | 264 | WP_001345816.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| QQ971_RS24990 (66768) | 66768..67743 | + | 976 | Protein_60 | IS66 family transposase ISCro1 | Transposase |
| QQ971_RS24995 (68087) | 68087..69274 | + | 1188 | Protein_61 | IS256 family transposase | - |
| QQ971_RS25000 (69438) | 69438..70076 | - | 639 | WP_000502873.1 | ParB N-terminal domain-containing protein | - |
| QQ971_RS25005 (70061) | 70061..71287 | - | 1227 | WP_000017073.1 | phosphoadenosine phosphosulfate reductase | - |
| QQ971_RS25010 (72366) | 72366..72491 | + | 126 | Protein_64 | transposase domain-containing protein | - |
| QQ971_RS25015 (72843) | 72843..75368 | - | 2526 | WP_286004810.1 | hypothetical protein | VF |
| QQ971_RS25020 (75753) | 75753..75872 | + | 120 | Protein_66 | transposase | - |
| QQ971_RS25025 (75973) | 75973..76963 | - | 991 | Protein_67 | IS3 family transposase | - |
| QQ971_RS25030 (77030) | 77030..78011 | + | 982 | Protein_68 | IS110 family transposase | - |
| QQ971_RS25035 (78264) | 78264..78368 | - | 105 | WP_001443026.1 | IS3 family transposase IS1351 | Transposase |
| QQ971_RS25040 (78396) | 78396..79233 | - | 838 | Protein_70 | hypothetical protein | VF |
| QQ971_RS25045 (79916) | 79916..80881 | - | 966 | Protein_71 | IS3 family transposase | - |
| QQ971_RS25050 (82987) | 82987..83205 | + | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QQ971_RS25055 (83207) | 83207..83512 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QQ971_RS25060 (83513) | 83513..84319 | + | 807 | WP_069892513.1 | site-specific integrase | - |
| QQ971_RS25065 (85313) | 85313..86479 | + | 1167 | WP_000772446.1 | hypothetical protein | VF |
| QQ971_RS25070 (86479) | 86479..87450 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QQ971_RS25075 (88403) | 88403..89304 | + | 902 | Protein_77 | DUF1281 domain-containing protein | - |
| QQ971_RS25080 (89308) | 89308..89612 | + | 305 | Protein_78 | hypothetical protein | - |
| QQ971_RS25085 (89689) | 89689..90372 | + | 684 | WP_000085939.1 | DNA methylase | - |
| QQ971_RS25090 (90373) | 90373..90594 | + | 222 | WP_001104904.1 | hypothetical protein | - |
| QQ971_RS25095 (90488) | 90488..91042 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| QQ971_RS25100 (91088) | 91088..91864 | + | 777 | WP_001005032.1 | hypothetical protein | - |
| QQ971_RS25105 (92277) | 92277..92702 | + | 426 | WP_001198920.1 | antirestriction protein | - |
| QQ971_RS25110 (92749) | 92749..93171 | + | 423 | WP_089521800.1 | DUF1380 family protein | - |
| QQ971_RS25115 (93168) | 93168..93359 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| QQ971_RS25120 (94147) | 94147..94686 | + | 540 | WP_000290801.1 | single-stranded DNA-binding protein | - |
| QQ971_RS25125 (94743) | 94743..94976 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| QQ971_RS25130 (95042) | 95042..97000 | + | 1959 | WP_000117171.1 | ParB/RepB/Spo0J family partition protein | - |
| QQ971_RS25135 (97055) | 97055..97489 | + | 435 | WP_000845928.1 | conjugation system SOS inhibitor PsiB | - |
| QQ971_RS25140 (97486) | 97486..98248 | + | 763 | Protein_90 | plasmid SOS inhibition protein A | - |
| - (98217) | 98217..98415 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (98217) | 98217..98415 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (98217) | 98217..98415 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (98217) | 98217..98415 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| QQ971_RS25145 (98422) | 98422..98571 | + | 150 | Protein_91 | DUF5431 family protein | - |
| QQ971_RS25150 (98513) | 98513..98638 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QQ971_RS25155 (98939) | 98939..99235 | - | 297 | Protein_93 | hypothetical protein | - |
| QQ971_RS25160 (99305) | 99305..99511 | + | 207 | WP_000547963.1 | hypothetical protein | - |
| QQ971_RS25165 (99536) | 99536..99823 | + | 288 | WP_000107542.1 | hypothetical protein | - |
| QQ971_RS25170 (99942) | 99942..100763 | + | 822 | WP_001234474.1 | DUF932 domain-containing protein | - |
| QQ971_RS25175 (101058) | 101058..101660 | - | 603 | WP_000243701.1 | hypothetical protein | VF |
| QQ971_RS25180 (101981) | 101981..102364 | + | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QQ971_RS25185 (102551) | 102551..103240 | + | 690 | WP_285978676.1 | conjugal transfer transcriptional regulator TraJ | - |
| QQ971_RS25190 (103333) | 103333..103734 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| QQ971_RS25195 (103767) | 103767..104132 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| QQ971_RS25200 (104147) | 104147..104458 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| QQ971_RS25205 (104480) | 104480..105046 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| QQ971_RS25210 (105033) | 105033..105761 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| QQ971_RS25215 (105761) | 105761..107188 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QQ971_RS25220 (107178) | 107178..107768 | + | 591 | WP_000002792.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QQ971_RS25225 (107755) | 107755..107952 | + | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| QQ971_RS25230 (107964) | 107964..108215 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| QQ971_RS25235 (108212) | 108212..108727 | + | 516 | WP_000809843.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QQ971_RS25240 (108862) | 108862..109083 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| QQ971_RS25245 (109243) | 109243..109860 | + | 618 | Protein_111 | TraC family protein | - |
| QQ971_RS25255 (111115) | 111115..111789 | + | 675 | Protein_113 | conjugal transfer protein TraH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|