MGE detailed information
MGE type: Conjugative plasmid MGE length: 90249 bp
Accession: NZ_CP126326 Location: 1..90249 Organism: Salmonella enterica subsp. enterica strain HL21 Replicon: plasmid pHL21A
Accession: NZ_CP126326 Location: 1..90249 Organism: Salmonella enterica subsp. enterica strain HL21 Replicon: plasmid pHL21A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QN088_RS23360 (QN088_23360) | 2658..3188 | + | 531 | WP_284546333.1 | hypothetical protein | - |
| QN088_RS23365 (QN088_23365) | 3268..3816 | + | 549 | WP_284546334.1 | hypothetical protein | - |
| QN088_RS23370 (QN088_23370) | 3997..4404 | + | 408 | WP_284546335.1 | hypothetical protein | - |
| QN088_RS23375 (QN088_23375) | 4434..4940 | + | 507 | WP_284546336.1 | hypothetical protein | - |
| QN088_RS23380 (QN088_23380) | 5123..5320 | + | 198 | Protein_5 | transposase | - |
| QN088_RS23385 (QN088_23385) | 5340..6035 | + | 696 | WP_079975203.1 | aquaporin Z | - |
| QN088_RS23390 (QN088_23390) | 6374..6799 | + | 426 | WP_284546337.1 | hypothetical protein | - |
| QN088_RS23395 (QN088_23395) | 7375..7791 | - | 417 | WP_284546338.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QN088_RS23400 (QN088_23400) | 7788..8018 | - | 231 | WP_008322219.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| QN088_RS23405 (QN088_23405) | 8762..8980 | + | 219 | WP_079975208.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QN088_RS23410 (QN088_23410) | 8982..9287 | + | 306 | WP_001159874.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QN088_RS23415 (QN088_23415) | 9289..9579 | + | 291 | WP_001266174.1 | hypothetical protein | - |
| QN088_RS23420 (QN088_23420) | 9576..10076 | + | 501 | WP_284546339.1 | 3'-5' exonuclease | - |
| QN088_RS23425 (QN088_23425) | 10264..10722 | + | 459 | Protein_14 | 3'-5' exonuclease | - |
| QN088_RS23430 (QN088_23430) | 10757..11539 | + | 783 | WP_015059761.1 | IS91 family transposase ISSod25 | Transposase |
| QN088_RS23435 (QN088_23435) | 11682..12623 | - | 942 | WP_000728920.1 | ISNCY family transposase ISSen7 | VF |
| QN088_RS23440 (QN088_23440) | 12927..13175 | - | 249 | WP_015059763.1 | hypothetical protein | - |
| QN088_RS23445 (QN088_23445) | 13280..13570 | - | 291 | WP_015059764.1 | hypothetical protein | - |
| QN088_RS23450 (QN088_23450) | 13567..14193 | - | 627 | WP_015059765.1 | ParA family plasmid-partitioning AAA ATPase | - |
| QN088_RS23455 (QN088_23455) | 14372..15318 | - | 947 | Protein_20 | translesion error-prone DNA polymerase V subunit UmuC | - |
| QN088_RS23460 (QN088_23460) | 15318..15740 | - | 423 | WP_015059769.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QN088_RS23465 (QN088_23465) | 16199..17059 | + | 861 | WP_015059770.1 | RepB family plasmid replication initiator protein | - |
| QN088_RS23470 (QN088_23470) | 17563..18243 | + | 681 | WP_015059772.1 | DNA methylase | - |
| QN088_RS23475 (QN088_23475) | 18284..18703 | + | 420 | WP_015059773.1 | DUF1380 family protein | - |
| QN088_RS23480 (QN088_23480) | 18757..19161 | + | 405 | WP_015059774.1 | DUF1380 family protein | - |
| QN088_RS23485 (QN088_23485) | 19229..19818 | + | 590 | Protein_26 | hypothetical protein | - |
| QN088_RS23490 (QN088_23490) | 20238..20666 | + | 429 | WP_079955204.1 | antirestriction protein | - |
| QN088_RS23495 (QN088_23495) | 20733..21167 | + | 435 | WP_079975210.1 | DUF1380 family protein | - |
| QN088_RS23500 (QN088_23500) | 21403..21736 | + | 334 | Protein_29 | DNA polymerase III subunit theta | - |
| QN088_RS23505 (QN088_23505) | 21701..21934 | - | 234 | WP_079955245.1 | hypothetical protein | - |
| QN088_RS23510 (QN088_23510) | 22005..22104 | - | 100 | Protein_31 | hypothetical protein | - |
| QN088_RS23515 (QN088_23515) | 22431..22949 | + | 519 | WP_079975211.1 | single-stranded DNA-binding protein SSB2 | - |
| QN088_RS23520 (QN088_23520) | 23004..23246 | + | 243 | WP_000131519.1 | DUF905 domain-containing protein | - |
| QN088_RS23525 (QN088_23525) | 23315..25312 | + | 1998 | WP_284546340.1 | ParB/RepB/Spo0J family partition protein | - |
| QN088_RS23530 (QN088_23530) | 25352..25786 | + | 435 | WP_079975213.1 | conjugation system SOS inhibitor PsiB | - |
| QN088_RS23535 (QN088_23535) | 25783..26520 | + | 738 | WP_284546341.1 | plasmid SOS inhibition protein A | - |
| QN088_RS23540 (QN088_23540) | 26769..26927 | + | 159 | WP_176452916.1 | hypothetical protein | - |
| QN088_RS23545 (QN088_23545) | 27030..27849 | + | 820 | Protein_38 | DUF932 domain-containing protein | - |
| QN088_RS23550 (QN088_23550) | 28160..28630 | - | 471 | WP_042828200.1 | hypothetical protein | VF |
| QN088_RS23555 (QN088_23555) | 29054..29434 | + | 381 | WP_001151568.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QN088_RS23560 (QN088_23560) | 29629..30318 | + | 690 | WP_079841988.1 | conjugal transfer transcriptional regulator TraJ | - |
| QN088_RS23565 (QN088_23565) | 30411..30812 | + | 402 | WP_227005938.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| QN088_RS23570 (QN088_23570) | 30854..31216 | + | 363 | WP_001274202.1 | type IV conjugative transfer system pilin TraA | - |
| QN088_RS23575 (QN088_23575) | 31231..31542 | + | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| QN088_RS23580 (QN088_23580) | 31564..32130 | + | 567 | WP_079975214.1 | type IV conjugative transfer system protein TraE | - |
| QN088_RS23585 (QN088_23585) | 32117..32857 | + | 741 | WP_079955193.1 | type-F conjugative transfer system secretin TraK | - |
| QN088_RS23590 (QN088_23590) | 32857..34278 | + | 1422 | WP_079975215.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QN088_RS23595 (QN088_23595) | 34268..34864 | + | 597 | WP_058108410.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QN088_RS23600 (QN088_23600) | 34842..35087 | + | 246 | WP_077950176.1 | DUF2689 domain-containing protein | - |
| QN088_RS23605 (QN088_23605) | 35084..35599 | + | 516 | WP_079975216.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QN088_RS23610 (QN088_23610) | 35734..35955 | + | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| QN088_RS23615 (QN088_23615) | 35948..36415 | + | 468 | WP_079955208.1 | hypothetical protein | - |
| QN088_RS23620 (QN088_23620) | 36412..36795 | + | 384 | WP_079955209.1 | hypothetical protein | - |
| QN088_RS23625 (QN088_23625) | 36811..39459 | + | 2649 | WP_284546342.1 | type IV secretion system protein TraC | - |
| QN088_RS23630 (QN088_23630) | 39434..39820 | + | 387 | WP_053253594.1 | type-F conjugative transfer system protein TrbI | - |
| QN088_RS23635 (QN088_23635) | 39817..40449 | + | 633 | WP_079975218.1 | type-F conjugative transfer system protein TraW | - |
| QN088_RS23640 (QN088_23640) | 40446..41438 | + | 993 | WP_079975219.1 | conjugal transfer pilus assembly protein TraU | - |
| QN088_RS23645 (QN088_23645) | 41457..41765 | + | 309 | WP_079975220.1 | hypothetical protein | - |
| QN088_RS23650 (QN088_23650) | 41750..42388 | + | 639 | WP_079975221.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QN088_RS23655 (QN088_23655) | 42425..42844 | + | 420 | WP_021003392.1 | HNH endonuclease signature motif containing protein | - |
| QN088_RS23660 (QN088_23660) | 42841..44667 | + | 1827 | WP_079975222.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QN088_RS23665 (QN088_23665) | 44678..44893 | + | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| QN088_RS23670 (QN088_23670) | 44905..45654 | + | 750 | WP_079975223.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QN088_RS23675 (QN088_23675) | 45868..46161 | + | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QN088_RS23680 (QN088_23680) | 46148..46696 | + | 549 | WP_079955199.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QN088_RS23685 (QN088_23685) | 46686..48068 | + | 1383 | WP_001161720.1 | conjugal transfer pilus assembly protein TraH | - |
| QN088_RS23690 (QN088_23690) | 48065..50887 | + | 2823 | WP_079975225.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QN088_RS23695 (QN088_23695) | 50909..51388 | + | 480 | WP_284546307.1 | surface exclusion protein | - |
| QN088_RS23700 (QN088_23700) | 51734..52465 | + | 732 | WP_079975227.1 | conjugal transfer complement resistance protein TraT | - |
| QN088_RS23705 (QN088_23705) | 52690..53196 | + | 507 | WP_254880449.1 | hypothetical protein | - |
| QN088_RS23710 (QN088_23710) | 53474..55744 | + | 2271 | WP_284546308.1 | type IV conjugative transfer system coupling protein TraD | - |
| QN088_RS23715 (QN088_23715) | 55753..56151 | - | 399 | WP_000911322.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QN088_RS23720 (QN088_23720) | 56151..56378 | - | 228 | WP_000450263.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| QN088_RS23725 (QN088_23725) | 56460..61727 | + | 5268 | WP_079975180.1 | Multifunctional conjugation protein TraI | Relaxase |
| QN088_RS23730 (QN088_23730) | 61747..62487 | + | 741 | WP_079975181.1 | conjugal transfer pilus acetylase TraX | - |
| QN088_RS23735 (QN088_23735) | 62542..63105 | + | 564 | WP_079975182.1 | fertility inhibition protein FinO | - |
| QN088_RS23740 (QN088_23740) | 63372..63596 | - | 225 | WP_042828339.1 | hypothetical protein | - |
| QN088_RS23745 (QN088_23745) | 63797..64063 | + | 267 | WP_079955189.1 | hypothetical protein | - |
| QN088_RS23750 (QN088_23750) | 64215..64421 | + | 207 | WP_000838014.1 | hemolysin expression modulator Hha | - |
| QN088_RS23755 (QN088_23755) | 64530..64747 | + | 218 | Protein_80 | DUF465 domain-containing protein | - |
| QN088_RS23760 (QN088_23760) | 64698..64979 | - | 282 | WP_186795884.1 | hypothetical protein | - |
| QN088_RS23765 (QN088_23765) | 65111..65254 | + | 144 | Protein_82 | DsbA family protein | - |
| QN088_RS23770 (QN088_23770) | 65285..65746 | + | 462 | Protein_83 | thioredoxin domain-containing protein | - |
| QN088_RS23775 (QN088_23775) | 66539..66703 | + | 165 | WP_284546309.1 | hypothetical protein | - |
| QN088_RS23780 (QN088_23780) | 66824..67369 | + | 546 | WP_254880450.1 | Cardiolipin synthase A | VF |
| QN088_RS23785 (QN088_23785) | 67495..67752 | + | 258 | WP_079975184.1 | replication regulatory protein RepA | - |
| QN088_RS23790 (QN088_23790) | 68055..68924 | + | 870 | WP_254880447.1 | plasmid replication initiator RepA | - |
| QN088_RS23795 (QN088_23795) | 69507..69632 | + | 126 | WP_284546310.1 | hypothetical protein | - |
| QN088_RS23800 (QN088_23800) | 69810..70079 | + | 270 | WP_079955196.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QN088_RS23805 (QN088_23805) | 70079..70357 | + | 279 | WP_254880451.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QN088_RS23810 (QN088_23810) | 70654..71024 | + | 371 | Protein_91 | hypothetical protein | - |
| QN088_RS23815 (QN088_23815) | 71461..72017 | + | 557 | Protein_92 | Tn3 family transposase | - |
| QN088_RS23820 (QN088_23820) | 72319..72744 | - | 426 | WP_284546311.1 | hypothetical protein | - |
| QN088_RS23825 (QN088_23825) | 73424..73636 | - | 213 | WP_284546312.1 | hypothetical protein | - |
| QN088_RS23830 (QN088_23830) | 74099..74422 | + | 324 | WP_284546313.1 | aquaporin | - |
| QN088_RS23835 (QN088_23835) | 74723..75295 | + | 573 | WP_284546314.1 | ISKra4 family transposase ISCep1 | VF |
| QN088_RS23840 (QN088_23840) | 75252..76106 | - | 855 | WP_284546315.1 | HTH-type transcriptional activator RhaR | VF |
| QN088_RS23845 (QN088_23845) | 76326..76985 | + | 660 | WP_284546316.1 | Tyrosine recombinase XerD | VF |
| QN088_RS23850 (QN088_23850) | 77846..78388 | + | 543 | WP_284546317.1 | Fimbria A protein | VF |
| QN088_RS23855 (QN088_23855) | 78461..79012 | + | 552 | WP_284546318.1 | PAP fimbrial minor pilin protein | VF |
| QN088_RS23860 (QN088_23860) | 79153..81675 | + | 2523 | WP_284546319.1 | Outer membrane usher protein PapC | VF |
| QN088_RS23865 (QN088_23865) | 81812..82477 | + | 666 | WP_284546343.1 | Chaperone protein PapD | VF |
| QN088_RS23870 (QN088_23870) | 82501..82947 | + | 447 | WP_284546320.1 | hypothetical protein | - |
| QN088_RS23875 (QN088_23875) | 82940..83476 | + | 537 | WP_284546321.1 | Protein PrsK | VF |
| QN088_RS23880 (QN088_23880) | 83488..84999 | + | 1512 | WP_284546322.1 | FKBP-type peptidyl-prolyl cis-trans isomerase N-terminal domain-containing protein | - |
| QN088_RS23885 (QN088_23885) | 84996..85535 | + | 540 | WP_284546323.1 | fimbrial protein | - |
| QN088_RS23890 (QN088_23890) | 85566..85898 | + | 333 | WP_284546324.1 | hypothetical protein | VF |
| QN088_RS23895 (QN088_23895) | 85895..86341 | + | 447 | WP_284546325.1 | hypothetical protein | - |
| QN088_RS23900 (QN088_23900) | 86367..86753 | + | 387 | WP_284546326.1 | hypothetical protein | - |
| QN088_RS23905 (QN088_23905) | 86750..87022 | + | 273 | WP_284546327.1 | hypothetical protein | - |
| QN088_RS23910 (QN088_23910) | 87019..87174 | + | 156 | WP_284546328.1 | hypothetical protein | - |
| QN088_RS23915 (QN088_23915) | 87191..87814 | + | 624 | WP_284546329.1 | helix-turn-helix transcriptional regulator | - |
| QN088_RS23920 (QN088_23920) | 88066..89070 | + | 1005 | WP_284546330.1 | hypothetical protein | - |
| QN088_RS23925 (QN088_23925) | 89351..90106 | + | 756 | WP_284546331.1 | Chaperone protein caf1M | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|