MGE detailed information
MGE type: Prophage MGE length: 8692 bp
Accession: NZ_CP126325 Location: 305500..314191 Organism: Salmonella enterica subsp. enterica strain HL21 Replicon: chromosome
Accession: NZ_CP126325 Location: 305500..314191 Organism: Salmonella enterica subsp. enterica strain HL21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QN088_RS01370 (301304) | 301304..302407 | + | 1104 | WP_284546148.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| QN088_RS01375 (302491) | 302491..302625 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| QN088_RS01380 (302603) | 302603..302986 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| QN088_RS01385 (303408) | 303408..304517 | + | 1110 | WP_000822968.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| QN088_RS01390 (304577) | 304577..305503 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| QN088_RS01395 (305500) | 305500..306777 | + | 1278 | WP_000803764.1 | branched chain amino acid ABC transporter permease LivM | - |
| QN088_RS01400 (306774) | 306774..307541 | + | 768 | WP_000082083.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| QN088_RS01405 (307543) | 307543..308256 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| QN088_RS01410 (308387) | 308387..308608 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| QN088_RS01415 (308605) | 308605..308973 | + | 369 | WP_000174963.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| QN088_RS01420 (309232) | 309232..310548 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| QN088_RS01425 (310653) | 310653..311540 | + | 888 | WP_284546149.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| QN088_RS01430 (311537) | 311537..312382 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| QN088_RS01435 (312384) | 312384..313454 | + | 1071 | WP_000907842.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| QN088_RS01440 (313451) | 313451..314191 | + | 741 | WP_000073554.1 | glycerophosphodiester phosphodiesterase | - |
| QN088_RS01445 (314188) | 314188..314604 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| QN088_RS01450 (314730) | 314730..316472 | + | 1743 | WP_000805108.1 | gamma-glutamyltransferase | - |
| QN088_RS01455 (316517) | 316517..317551 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| QN088_RS01460 (317548) | 317548..318519 | - | 972 | WP_001038949.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.01 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.01 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.01 |