MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110076 bp
Accession: NZ_CP124461 Location: 1..110076 Organism: Escherichia coli strain AVS0947 Replicon: plasmid pAVS0947-A
Accession: NZ_CP124461 Location: 1..110076 Organism: Escherichia coli strain AVS0947 Replicon: plasmid pAVS0947-A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP79_RS24440 (1) | 1..978 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| QJP79_RS24445 (1263) | 1263..2003 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| QJP79_RS24450 (2124) | 2124..2312 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| QJP79_RS24455 (2679) | 2679..3848 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| QJP79_RS24460 (4074) | 4074..4249 | - | 176 | Protein_4 | IS3 family transposase | - |
| QJP79_RS24465 (4695) | 4695..4967 | - | 273 | WP_001322642.1 | Major pilu subunit operon regulatory protein PapB | VF |
| QJP79_RS24470 (5504) | 5504..5928 | - | 425 | Protein_6 | IS3 family transposase IS2 | Transposase |
| QJP79_RS24475 (6210) | 6210..8180 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| QJP79_RS24480 (8187) | 8187..8978 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| QJP79_RS24485 (9041) | 9041..9649 | - | 609 | Protein_9 | IS66 family transposase ISEc22 | Transposase |
| QJP79_RS24490 (9717) | 9717..10499 | - | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| QJP79_RS24495 (10496) | 10496..11517 | - | 1022 | Protein_11 | IS21 family transposase IS100kyp | Transposase |
| QJP79_RS24500 (11603) | 11603..12546 | - | 944 | Protein_12 | IS66 family transposase ISEc8 | Transposase |
| QJP79_RS24505 (12595) | 12595..12942 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| QJP79_RS24510 (12939) | 12939..13343 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| QJP79_RS24515 (13423) | 13423..13761 | - | 339 | Protein_15 | IS3 family transposase IS629 | Transposase |
| QJP79_RS24520 (13845) | 13845..15353 | - | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| QJP79_RS24525 (16026) | 16026..16765 | - | 740 | Protein_17 | IS3 family transposase IS629 | Transposase |
| QJP79_RS24530 (16791) | 16791..17096 | + | 306 | Protein_18 | IS91 family transposase ISSbo1 | Transposase |
| QJP79_RS24535 (17619) | 17619..18794 | - | 1176 | WP_001020413.1 | putative protein YncE | VF |
| QJP79_RS24540 (18863) | 18863..21124 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| QJP79_RS24545 (21293) | 21293..22069 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| QJP79_RS24550 (22077) | 22077..22952 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| QJP79_RS24555 (23326) | 23326..24087 | - | 762 | Protein_23 | replication initiation protein | - |
| QJP79_RS24560 (25607) | 25607..25942 | - | 336 | WP_001080732.1 | colicin E1 family microcin immunity protein | - |
| QJP79_RS24565 (26071) | 26071..26418 | + | 348 | WP_000142452.1 | DUF6404 family protein | - |
| QJP79_RS24570 (26438) | 26438..26947 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| QJP79_RS24575 (26944) | 26944..27204 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| QJP79_RS24580 (27306) | 27306..28044 | + | 739 | Protein_28 | IS3 family transposase | - |
| QJP79_RS24585 (28716) | 28716..29030 | + | 315 | Protein_29 | IS5 family transposase ISKpn26 | Transposase |
| QJP79_RS24590 (29031) | 29031..29204 | + | 174 | Protein_30 | IS5 family transposase ISKpn26 | Transposase |
| QJP79_RS24595 (29354) | 29354..29987 | - | 634 | Protein_31 | histidine-type phosphatase | - |
| QJP79_RS24600 (30109) | 30109..30594 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| QJP79_RS24605 (30619) | 30619..31104 | - | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| QJP79_RS24610 (31091) | 31091..31786 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| QJP79_RS24615 (31791) | 31791..32921 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| QJP79_RS24620 (32911) | 32911..34194 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| QJP79_RS24625 (34197) | 34197..35576 | - | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| QJP79_RS24630 (35680) | 35680..36207 | - | 528 | WP_000178050.1 | iron transporter | - |
| QJP79_RS24635 (36248) | 36248..38134 | - | 1887 | WP_000118029.1 | FTR1 family protein | - |
| QJP79_RS24640 (38481) | 38481..39242 | - | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| QJP79_RS24645 (39479) | 39479..39985 | - | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| QJP79_RS24650 (39975) | 39975..40145 | - | 171 | Protein_42 | DsbA family protein | - |
| QJP79_RS24655 (40283) | 40283..40396 | - | 114 | Protein_43 | IS6 family transposase | - |
| QJP79_RS24660 (40596) | 40596..41293 | + | 698 | WP_151884388.1 | IS1 family transposase IS1X2 | Transposase |
| QJP79_RS24665 (41430) | 41430..42323 | - | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| QJP79_RS24670 (42366) | 42366..43361 | - | 996 | WP_000246636.1 | hypothetical protein | - |
| QJP79_RS24675 (44069) | 44069..44287 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QJP79_RS24680 (44289) | 44289..44594 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QJP79_RS24685 (44595) | 44595..45401 | + | 807 | WP_000016982.1 | site-specific integrase | - |
| QJP79_RS24690 (46175) | 46175..46930 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| QJP79_RS24695 (47518) | 47518..48684 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| QJP79_RS24700 (48684) | 48684..49655 | + | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QJP79_RS24705 (50350) | 50350..51250 | + | 901 | Protein_53 | DUF1281 domain-containing protein | - |
| QJP79_RS24710 (51247) | 51247..51558 | + | 312 | WP_032260789.1 | hypothetical protein | - |
| QJP79_RS24715 (51634) | 51634..52317 | + | 684 | Protein_55 | DNA methylase | - |
| QJP79_RS24720 (52318) | 52318..52539 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| QJP79_RS24725 (52469) | 52469..52987 | + | 519 | WP_123325260.1 | DUF1380 family protein | - |
| QJP79_RS24730 (53037) | 53037..53813 | + | 777 | WP_001753849.1 | hypothetical protein | - |
| QJP79_RS24735 (54229) | 54229..54654 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| QJP79_RS24740 (54700) | 54700..55121 | + | 422 | Protein_60 | DUF1380 family protein | - |
| QJP79_RS24745 (55118) | 55118..55309 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| QJP79_RS24750 (56345) | 56345..56575 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| QJP79_RS24755 (56627) | 56627..57988 | + | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| QJP79_RS24760 (58036) | 58036..58599 | + | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| QJP79_RS24765 (58625) | 58625..58867 | + | 243 | WP_001617878.1 | hypothetical protein | - |
| QJP79_RS24770 (58750) | 58750..59037 | + | 288 | WP_097767096.1 | hypothetical protein | - |
| QJP79_RS24775 (59275) | 59275..59475 | + | 201 | Protein_67 | single-stranded DNA-binding protein | - |
| QJP79_RS24780 (59506) | 59506..60046 | + | 541 | Protein_68 | single-stranded DNA-binding protein | - |
| QJP79_RS24785 (60109) | 60109..60342 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| QJP79_RS24790 (60408) | 60408..62366 | + | 1959 | WP_283201915.1 | ParB/RepB/Spo0J family partition protein | - |
| QJP79_RS24795 (62421) | 62421..62855 | + | 435 | WP_000845940.1 | conjugation system SOS inhibitor PsiB | - |
| QJP79_RS24800 (62852) | 62852..63614 | + | 763 | Protein_72 | plasmid SOS inhibition protein A | - |
| - (63583) | 63583..63769 | + | 187 | NuclAT_0 | - | - |
| - (63583) | 63583..63769 | + | 187 | NuclAT_0 | - | - |
| - (63583) | 63583..63769 | + | 187 | NuclAT_0 | - | - |
| - (63583) | 63583..63769 | + | 187 | NuclAT_0 | - | - |
| QJP79_RS24805 (63815) | 63815..65185 | + | 1371 | Protein_73 | IS3 family transposase IS150 | Transposase |
| - (65212) | 65212..65252 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (65212) | 65212..65252 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (65212) | 65212..65252 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (65212) | 65212..65252 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| QJP79_RS24810 (65238) | 65238..65387 | + | 150 | Protein_74 | plasmid maintenance protein Mok | - |
| QJP79_RS24815 (65329) | 65329..65454 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QJP79_RS24820 (65674) | 65674..65904 | + | 231 | WP_001426396.1 | hypothetical protein | - |
| QJP79_RS24825 (65902) | 65902..66075 | - | 174 | Protein_77 | hypothetical protein | - |
| QJP79_RS24830 (66374) | 66374..66660 | + | 287 | Protein_78 | hypothetical protein | - |
| QJP79_RS24835 (66778) | 66778..66903 | + | 126 | Protein_79 | DUF945 domain-containing protein | - |
| QJP79_RS24840 (66959) | 66959..67657 | + | 699 | Protein_80 | IS1 family transposase IS1G | Transposase |
| QJP79_RS24845 (67801) | 67801..68085 | + | 285 | WP_001617873.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QJP79_RS24850 (68072) | 68072..68617 | + | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QJP79_RS24855 (68547) | 68547..68894 | + | 348 | WP_071571857.1 | P-type conjugative transfer protein TrbJ | - |
| QJP79_RS24860 (68875) | 68875..69267 | + | 393 | WP_000659962.1 | F-type conjugal transfer protein TrbF | - |
| QJP79_RS24865 (69254) | 69254..70627 | + | 1374 | WP_000944328.1 | conjugal transfer pilus assembly protein TraH | - |
| QJP79_RS24870 (70624) | 70624..73443 | + | 2820 | WP_001007062.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QJP79_RS24875 (73462) | 73462..73959 | + | 498 | WP_000605862.1 | entry exclusion protein | - |
| QJP79_RS24880 (73991) | 73991..74722 | + | 732 | WP_000850429.1 | conjugal transfer complement resistance protein TraT | - |
| QJP79_RS24885 (74925) | 74925..75704 | + | 780 | WP_000199914.1 | hypothetical protein | - |
| QJP79_RS24890 (75701) | 75701..77917 | + | 2217 | WP_023356304.1 | type IV conjugative transfer system coupling protein TraD | - |
| QJP79_RS24895 (77917) | 77917..83187 | + | 5271 | WP_001617867.1 | Multifunctional conjugation protein TraI | Relaxase |
| QJP79_RS24900 (83207) | 83207..83953 | + | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| QJP79_RS24905 (84008) | 84008..84568 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| QJP79_RS24910 (84699) | 84699..84911 | + | 213 | WP_013023861.1 | hypothetical protein | - |
| QJP79_RS24915 (85470) | 85470..85895 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QJP79_RS24920 (85892) | 85892..86242 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QJP79_RS24925 (86273) | 86273..87886 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QJP79_RS24930 (87964) | 87964..88250 | + | 287 | Protein_98 | DUF2726 domain-containing protein | - |
| - (88217) | 88217..88277 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - (88217) | 88217..88277 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - (88217) | 88217..88277 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - (88217) | 88217..88277 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| QJP79_RS24935 (88322) | 88322..88456 | + | 135 | WP_023144756.1 | Hok/Gef family protein | Toxin Detail |
| QJP79_RS24940 (88753) | 88753..89007 | + | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| QJP79_RS24945 (89244) | 89244..89318 | + | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| QJP79_RS24950 (89311) | 89311..90168 | + | 858 | WP_001617855.1 | incFII family plasmid replication initiator RepA | - |
| QJP79_RS24955 (91108) | 91108..91752 | + | 645 | WP_100620350.1 | CPBP family intramembrane metalloprotease | - |
| QJP79_RS24960 (91845) | 91845..92102 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| QJP79_RS24965 (92035) | 92035..92436 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| QJP79_RS24970 (92721) | 92721..94031 | + | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| QJP79_RS24975 (94060) | 94060..94158 | + | 99 | Protein_107 | IS1 family transposase | - |
| QJP79_RS24980 (94308) | 94308..95168 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| QJP79_RS24985 (95455) | 95455..96159 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QJP79_RS24990 (96209) | 96209..96427 | - | 219 | Protein_110 | IS4 family transposase | - |
| QJP79_RS25000 (97325) | 97325..97546 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| QJP79_RS25005 (97546) | 97546..97926 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| QJP79_RS25010 (97931) | 97931..98110 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| QJP79_RS25015 (98138) | 98138..98416 | + | 279 | Protein_115 | pdcB | - |
| QJP79_RS25020 (98421) | 98421..98834 | + | 414 | Protein_116 | IS3 family transposase ISLad1 | Transposase |
| QJP79_RS25025 (98784) | 98784..99119 | - | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| QJP79_RS25030 (99329) | 99329..100309 | - | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| QJP79_RS25035 (100553) | 100553..101956 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| QJP79_RS25040 (101943) | 101943..102875 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| QJP79_RS25045 (102984) | 102984..103313 | - | 330 | Protein_121 | TOBE domain-containing protein | - |
| QJP79_RS25055 (104174) | 104174..104332 | + | 159 | WP_228955855.1 | abortive infection family protein | - |
| QJP79_RS25060 (104491) | 104491..105462 | - | 972 | Protein_124 | hypothetical protein | - |
| QJP79_RS25065 (106074) | 106074..109052 | - | 2979 | WP_172905819.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| QJP79_RS25070 (109207) | 109207..109848 | + | 642 | WP_001473476.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|