MGE detailed information
MGE type: Conjugative plasmid MGE length: 105909 bp
Accession: NZ_CP124352 Location: 1..105909 Organism: Escherichia coli strain AVS0362 Replicon: plasmid pAVS0362-A
Accession: NZ_CP124352 Location: 1..105909 Organism: Escherichia coli strain AVS0362 Replicon: plasmid pAVS0362-A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP84_RS26165 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| QJP84_RS26170 (1263) | 1263..2003 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| QJP84_RS26175 (2124) | 2124..2312 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| QJP84_RS26180 (2679) | 2679..3380 | + | 702 | WP_251297820.1 | hypothetical protein | - |
| QJP84_RS26185 (4063) | 4063..4238 | - | 176 | Protein_4 | IS3 family transposase | - |
| QJP84_RS26190 (4684) | 4684..4956 | - | 273 | WP_001322642.1 | Major pilu subunit operon regulatory protein PapB | VF |
| QJP84_RS26195 (5493) | 5493..5917 | - | 425 | Protein_6 | IS3 family transposase IS2 | Transposase |
| QJP84_RS26200 (6199) | 6199..8169 | + | 1971 | WP_001496335.1 | Hemin receptor | VF |
| QJP84_RS26205 (8176) | 8176..8967 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| QJP84_RS26210 (9030) | 9030..9638 | - | 609 | Protein_9 | IS66 family transposase ISEc22 | Transposase |
| QJP84_RS26215 (9706) | 9706..10487 | - | 782 | Protein_10 | IS21 family transposase IS100 | Transposase |
| QJP84_RS26220 (10484) | 10484..11507 | - | 1024 | Protein_11 | IS21 family transposase IS100kyp | Transposase |
| QJP84_RS26225 (11670) | 11670..12374 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QJP84_RS26230 (12439) | 12439..12681 | - | 243 | Protein_13 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| QJP84_RS26235 (12776) | 12776..15673 | + | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| QJP84_RS26240 (15810) | 15810..16211 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| QJP84_RS26245 (16144) | 16144..16401 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| QJP84_RS26250 (16494) | 16494..17147 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| QJP84_RS26255 (18086) | 18086..18943 | - | 858 | WP_032152935.1 | incFII family plasmid replication initiator RepA | - |
| QJP84_RS26260 (18936) | 18936..19010 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| QJP84_RS26265 (19245) | 19245..19502 | - | 258 | WP_000083821.1 | replication regulatory protein RepA | - |
| QJP84_RS26270 (19907) | 19907..20929 | + | 1023 | WP_000156883.1 | IS110 family transposase ISSm1 | Transposase |
| QJP84_RS26275 (21401) | 21401..21754 | + | 354 | WP_000005489.1 | hypothetical protein | - |
| QJP84_RS26280 (22167) | 22167..22745 | - | 579 | WP_032152936.1 | DUF2726 domain-containing protein | - |
| QJP84_RS26285 (22778) | 22778..23475 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| QJP84_RS26290 (23590) | 23590..23946 | + | 357 | WP_000229735.1 | IS66 family transposase ISEc23 | Transposase |
| QJP84_RS26295 (23943) | 23943..24293 | + | 351 | WP_000624718.1 | IS66 family transposase ISEc47 | Transposase |
| QJP84_RS26300 (24324) | 24324..24545 | + | 222 | WP_000080227.1 | IS66 family transposase ISEc43 | Transposase |
| QJP84_RS26305 (24497) | 24497..24838 | + | 342 | Protein_28 | IS66 family transposase IS682 | Transposase |
| QJP84_RS26310 (24902) | 24902..25381 | - | 480 | WP_001496175.1 | ArgR family transcriptional regulator | - |
| QJP84_RS26315 (25462) | 25462..26865 | - | 1404 | WP_000514417.1 | YfcC family protein | - |
| QJP84_RS26320 (26913) | 26913..27917 | - | 1005 | WP_000154545.1 | Ornithine carbamoyltransferase | VF |
| QJP84_RS26325 (28002) | 28002..28913 | - | 912 | WP_000440183.1 | carbamate kinase | - |
| QJP84_RS26330 (28924) | 28924..30144 | - | 1221 | WP_000410951.1 | arginine deiminase | - |
| QJP84_RS26335 (30851) | 30851..31465 | + | 615 | Protein_34 | VENN motif pre-toxin domain-containing protein | - |
| QJP84_RS26340 (31465) | 31465..31911 | - | 447 | Protein_35 | plasmid replication initiator RepA | - |
| QJP84_RS26345 (31904) | 31904..31978 | - | 75 | WP_032336874.1 | RepA leader peptide Tap | - |
| QJP84_RS26350 (32214) | 32214..32471 | - | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
| QJP84_RS26355 (32755) | 32755..32904 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (32948) | 32948..33009 | + | 62 | NuclAT_2 | - | Antitoxin Detail |
| - (32948) | 32948..33009 | + | 62 | NuclAT_2 | - | Antitoxin Detail |
| - (32948) | 32948..33009 | + | 62 | NuclAT_2 | - | Antitoxin Detail |
| - (32948) | 32948..33009 | + | 62 | NuclAT_2 | - | Antitoxin Detail |
| QJP84_RS26360 (33148) | 33148..33330 | - | 183 | WP_000968309.1 | hypothetical protein | - |
| QJP84_RS26365 (33431) | 33431..34047 | + | 617 | Protein_40 | IS1-like element IS1A family transposase | - |
| QJP84_RS26370 (34085) | 34085..35656 | - | 1572 | WP_023149734.1 | IS66 family transposase ISCro1 | Transposase |
| QJP84_RS26375 (35676) | 35676..36023 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| QJP84_RS26380 (36023) | 36023..36700 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| QJP84_RS26385 (36755) | 36755..36844 | + | 90 | Protein_44 | IS1 family transposase | - |
| QJP84_RS26390 (37145) | 37145..37357 | - | 213 | WP_005012601.1 | hypothetical protein | - |
| QJP84_RS26395 (37491) | 37491..38051 | - | 561 | WP_000139363.1 | fertility inhibition protein FinO | - |
| QJP84_RS26400 (38106) | 38106..38852 | - | 747 | WP_023149624.1 | conjugal transfer pilus acetylase TraX | - |
| QJP84_RS26405 (38872) | 38872..43992 | - | 5121 | WP_013362805.1 | Multifunctional conjugation protein TraI | Relaxase |
| QJP84_RS26410 (43992) | 43992..46181 | - | 2190 | WP_040110343.1 | type IV conjugative transfer system coupling protein TraD | - |
| QJP84_RS26415 (46433) | 46433..47164 | - | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| QJP84_RS26420 (47178) | 47178..47687 | - | 510 | WP_000628100.1 | conjugal transfer entry exclusion protein TraS | - |
| QJP84_RS26425 (47684) | 47684..50509 | - | 2826 | WP_001553826.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QJP84_RS26430 (50506) | 50506..51879 | - | 1374 | WP_021518370.1 | conjugal transfer pilus assembly protein TraH | - |
| QJP84_RS26435 (51866) | 51866..52258 | - | 393 | WP_000164675.1 | F-type conjugal transfer protein TrbF | - |
| QJP84_RS26440 (52212) | 52212..52526 | - | 315 | WP_023149603.1 | P-type conjugative transfer protein TrbJ | - |
| QJP84_RS26445 (52516) | 52516..53070 | - | 555 | WP_001553830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QJP84_RS26450 (53057) | 53057..53341 | - | 285 | WP_000624105.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QJP84_RS26455 (53422) | 53422..53757 | + | 336 | WP_000415571.1 | hypothetical protein | - |
| QJP84_RS26460 (53738) | 53738..54079 | - | 342 | WP_000556794.1 | conjugal transfer protein TrbA | - |
| QJP84_RS26465 (54093) | 54093..54836 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QJP84_RS26470 (54829) | 54829..55086 | - | 258 | WP_000864312.1 | conjugal transfer protein TrbE | - |
| QJP84_RS26475 (55113) | 55113..56921 | - | 1809 | WP_000821840.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QJP84_RS26480 (56918) | 56918..57556 | - | 639 | WP_021518374.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QJP84_RS26485 (57565) | 57565..58557 | - | 993 | WP_000830180.1 | conjugal transfer pilus assembly protein TraU | - |
| QJP84_RS26490 (58554) | 58554..59186 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| QJP84_RS26495 (59183) | 59183..59569 | - | 387 | WP_000099686.1 | type-F conjugative transfer system protein TrbI | - |
| QJP84_RS26500 (59566) | 59566..62193 | - | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| QJP84_RS26505 (62353) | 62353..62574 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| QJP84_RS26510 (62709) | 62709..63224 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QJP84_RS26515 (63221) | 63221..63472 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| QJP84_RS26520 (63484) | 63484..63681 | - | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| QJP84_RS26525 (63668) | 63668..64258 | - | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QJP84_RS26530 (64248) | 64248..65675 | - | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QJP84_RS26535 (65675) | 65675..66403 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| QJP84_RS26540 (66390) | 66390..66956 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| QJP84_RS26545 (66978) | 66978..67289 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| QJP84_RS26550 (67304) | 67304..67669 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| QJP84_RS26555 (67702) | 67702..68103 | - | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| QJP84_RS26560 (68196) | 68196..68885 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| QJP84_RS26565 (69072) | 69072..69455 | - | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QJP84_RS26570 (69788) | 69788..70378 | + | 591 | WP_192849409.1 | hypothetical protein | VF |
| QJP84_RS26575 (70675) | 70675..71496 | - | 822 | WP_001234426.1 | DUF932 domain-containing protein | - |
| QJP84_RS26580 (71614) | 71614..71901 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| QJP84_RS26585 (71926) | 71926..72132 | - | 207 | WP_000547968.1 | hypothetical protein | - |
| QJP84_RS26590 (72202) | 72202..72374 | + | 173 | Protein_85 | hypothetical protein | - |
| QJP84_RS26595 (72372) | 72372..72602 | - | 231 | WP_071586998.1 | hypothetical protein | - |
| QJP84_RS26600 (72822) | 72822..72947 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QJP84_RS26605 (72889) | 72889..73038 | - | 150 | Protein_88 | plasmid maintenance protein Mok | - |
| - (73024) | 73024..73055 | - | 32 | NuclAT_1 | - | Antitoxin Detail |
| - (73024) | 73024..73055 | - | 32 | NuclAT_1 | - | Antitoxin Detail |
| - (73024) | 73024..73055 | - | 32 | NuclAT_1 | - | Antitoxin Detail |
| - (73024) | 73024..73055 | - | 32 | NuclAT_1 | - | Antitoxin Detail |
| - (74497) | 74497..74694 | - | 198 | NuclAT_0 | - | - |
| - (74497) | 74497..74694 | - | 198 | NuclAT_0 | - | - |
| - (74497) | 74497..74694 | - | 198 | NuclAT_0 | - | - |
| - (74497) | 74497..74694 | - | 198 | NuclAT_0 | - | - |
| QJP84_RS26615 (74506) | 74506..74694 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| QJP84_RS26620 (74663) | 74663..75425 | - | 763 | Protein_91 | plasmid SOS inhibition protein A | - |
| QJP84_RS26625 (75422) | 75422..75856 | - | 435 | WP_000845937.1 | conjugation system SOS inhibitor PsiB | - |
| QJP84_RS26630 (75911) | 75911..76108 | - | 198 | Protein_93 | hypothetical protein | - |
| QJP84_RS26635 (76136) | 76136..76369 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| QJP84_RS26640 (76437) | 76437..76934 | - | 498 | WP_042039995.1 | single-stranded DNA-binding protein | - |
| QJP84_RS26645 (77084) | 77084..78985 | - | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| QJP84_RS26650 (79663) | 79663..79869 | - | 207 | WP_000275856.1 | hypothetical protein | - |
| QJP84_RS26655 (80109) | 80109..80372 | - | 264 | WP_071781663.1 | hypothetical protein | - |
| QJP84_RS26660 (80279) | 80279..80497 | - | 219 | WP_001496291.1 | hypothetical protein | - |
| QJP84_RS26665 (80523) | 80523..81088 | - | 566 | Protein_100 | class I SAM-dependent methyltransferase | - |
| QJP84_RS26670 (81136) | 81136..82497 | - | 1362 | WP_000199439.1 | DUF3560 domain-containing protein | - |
| QJP84_RS26675 (82549) | 82549..82779 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| QJP84_RS26680 (83291) | 83291..83539 | + | 249 | WP_071781657.1 | hypothetical protein | - |
| QJP84_RS26685 (83811) | 83811..84002 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| QJP84_RS26690 (83999) | 83999..84421 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| QJP84_RS26695 (84468) | 84468..84893 | - | 426 | WP_001546490.1 | antirestriction protein | - |
| QJP84_RS26700 (85307) | 85307..86077 | - | 771 | WP_001006251.1 | hypothetical protein | - |
| QJP84_RS26705 (86122) | 86122..86640 | - | 519 | WP_223349485.1 | DUF1380 family protein | - |
| QJP84_RS26710 (86570) | 86570..86791 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| QJP84_RS26715 (86792) | 86792..87475 | - | 684 | WP_032181561.1 | DNA methylase | - |
| QJP84_RS26720 (87552) | 87552..87863 | - | 312 | WP_012615291.1 | hypothetical protein | - |
| QJP84_RS26725 (87860) | 87860..88762 | - | 903 | WP_064766247.1 | DUF1281 domain-containing protein | - |
| QJP84_RS26730 (89500) | 89500..90471 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QJP84_RS26735 (90471) | 90471..91637 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| QJP84_RS26740 (92225) | 92225..92980 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| QJP84_RS26745 (93702) | 93702..94508 | - | 807 | WP_000016970.1 | site-specific integrase | - |
| QJP84_RS26750 (94509) | 94509..94814 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QJP84_RS26755 (94816) | 94816..95034 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QJP84_RS26760 (95594) | 95594..95824 | + | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| QJP84_RS26765 (95821) | 95821..96237 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QJP84_RS26770 (96312) | 96312..97877 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| QJP84_RS26775 (97862) | 97862..98884 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| QJP84_RS26785 (100361) | 100361..102555 | - | 2195 | Protein_124 | Ferric aerobactin receptor | VF |
| QJP84_RS26790 (102587) | 102587..103227 | - | 641 | Protein_125 | L-lysine N6-monooxygenase | VF |
| QJP84_RS26795 (103284) | 103284..103981 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| QJP84_RS26800 (104161) | 104161..104674 | - | 514 | Protein_127 | DUF4113 domain-containing protein | - |
| QJP84_RS26805 (104735) | 104735..104839 | - | 105 | Protein_128 | AAA family ATPase | - |
| QJP84_RS26810 (104841) | 104841..105164 | - | 324 | Protein_129 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|