MGE detailed information
MGE type: Conjugative plasmid MGE length: 102120 bp
Accession: NZ_CP122662 Location: 1..102120 Organism: Escherichia coli strain ETEC4073 Replicon: plasmid unnamed2
Accession: NZ_CP122662 Location: 1..102120 Organism: Escherichia coli strain ETEC4073 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY26_RS24000 (1) | 1..2700 | + | 2700 | WP_024143648.1 | hypothetical protein | Relaxase |
| QDY26_RS24005 (2737) | 2737..5028 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| QDY26_RS24010 (5021) | 5021..6091 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| QDY26_RS24015 (6110) | 6110..7318 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (7498) | 7498..7555 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (7498) | 7498..7555 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (7498) | 7498..7555 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (7498) | 7498..7555 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| QDY26_RS24020 (7610) | 7610..7762 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| QDY26_RS24025 (7834) | 7834..8085 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| QDY26_RS24030 (8584) | 8584..8679 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| QDY26_RS24035 (8744) | 8744..8920 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| QDY26_RS24040 (9312) | 9312..9521 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| QDY26_RS24045 (9593) | 9593..10243 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QDY26_RS24050 (10317) | 10317..12485 | - | 2169 | WP_021537350.1 | DotA/TraY family protein | - |
| QDY26_RS24055 (12582) | 12582..13166 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| QDY26_RS24060 (13195) | 13195..14397 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| QDY26_RS24065 (14364) | 14364..14978 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| QDY26_RS24070 (14978) | 14978..18022 | - | 3045 | WP_021265678.1 | IncI1-type conjugal transfer protein TraU | - |
| QDY26_RS24075 (18112) | 18112..18912 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| QDY26_RS24080 (18896) | 18896..19084 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| QDY26_RS24085 (19148) | 19148..19552 | - | 405 | WP_000086958.1 | IncI1-type conjugal transfer protein TraR | - |
| QDY26_RS24090 (19603) | 19603..20130 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QDY26_RS24095 (20130) | 20130..20834 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| QDY26_RS24100 (20834) | 20834..22123 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| QDY26_RS24105 (22126) | 22126..23109 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| QDY26_RS24110 (23120) | 23120..23812 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| QDY26_RS24115 (23809) | 23809..24156 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QDY26_RS24120 (24174) | 24174..27941 | - | 3768 | WP_001141527.1 | DUF5710 domain-containing protein | - |
| QDY26_RS24125 (28030) | 28030..28581 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| QDY26_RS24130 (28596) | 28596..28886 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| QDY26_RS24135 (28883) | 28883..30031 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| QDY26_RS24140 (30028) | 30028..30846 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| QDY26_RS24145 (30843) | 30843..31301 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| QDY26_RS24150 (31696) | 31696..32280 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| QDY26_RS24155 (32340) | 32340..33542 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| QDY26_RS24160 (33627) | 33627..34451 | - | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| QDY26_RS24165 (34602) | 34602..35756 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| QDY26_RS24170 (35755) | 35755..36039 | + | 285 | WP_187642572.1 | pilus assembly protein PilV | - |
| QDY26_RS24175 (36948) | 36948..37196 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| QDY26_RS24180 (37193) | 37193..38485 | - | 1293 | WP_268101449.1 | hypothetical protein | VF |
| QDY26_RS24185 (38485) | 38485..39141 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| QDY26_RS24190 (39126) | 39126..39686 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| QDY26_RS24195 (39696) | 39696..40310 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| QDY26_RS24200 (40328) | 40328..41425 | - | 1098 | WP_001208805.1 | hypothetical protein | VF |
| QDY26_RS24205 (41438) | 41438..42991 | - | 1554 | WP_000362202.1 | hypothetical protein | VF |
| QDY26_RS24210 (43002) | 43002..43454 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| QDY26_RS24215 (43441) | 43441..44736 | - | 1296 | WP_000752772.1 | hypothetical protein | VF |
| QDY26_RS24220 (44729) | 44729..46411 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| QDY26_RS24225 (46425) | 46425..46862 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| QDY26_RS24230 (46862) | 46862..47928 | - | 1067 | Protein_46 | hypothetical protein | VF |
| QDY26_RS24235 (48552) | 48552..48848 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| QDY26_RS24240 (49024) | 49024..49278 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| QDY26_RS24245 (49440) | 49440..49991 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| QDY26_RS24250 (50164) | 50164..50847 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| QDY26_RS24255 (51101) | 51101..51634 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| QDY26_RS24260 (52076) | 52076..52363 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| QDY26_RS24265 (52281) | 52281..52559 | - | 279 | WP_219065241.1 | ash family protein | - |
| QDY26_RS24270 (53517) | 53517..54548 | + | 1032 | WP_000907870.1 | plasmid replication initiator RepA | - |
| QDY26_RS24275 (55571) | 55571..56779 | - | 1209 | WP_000198533.1 | IS91 family transposase ISSbo1 | Transposase |
| QDY26_RS24280 (56760) | 56760..57032 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| QDY26_RS24285 (57236) | 57236..57940 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| QDY26_RS24290 (58073) | 58073..59296 | + | 1224 | WP_085286200.1 | Enterobactin exporter EntS | ARG |
| QDY26_RS24295 (59301) | 59301..60185 | + | 885 | WP_014386803.1 | hypothetical protein | ARG |
| QDY26_RS24300 (60458) | 60458..61603 | - | 1146 | Protein_60 | IS91 family transposase ISVsa3 | Transposase |
| QDY26_RS24305 (61961) | 61961..62230 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QDY26_RS24310 (62230) | 62230..62508 | + | 279 | WP_244442846.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QDY26_RS24315 (62548) | 62548..63396 | + | 849 | WP_021265674.1 | 3'-5' exonuclease | - |
| QDY26_RS24320 (63513) | 63513..63986 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| QDY26_RS24325 (64463) | 64463..64729 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| QDY26_RS24330 (64729) | 64729..65223 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| QDY26_RS24335 (65279) | 65279..65881 | - | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| QDY26_RS24340 (66235) | 66235..67581 | + | 1347 | WP_001132032.1 | protein YagA | - |
| QDY26_RS24345 (67860) | 67860..69740 | + | 1881 | WP_001283341.1 | colicin Ia central receptor-binding domain-containing protein | - |
| QDY26_RS24350 (69758) | 69758..70105 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| QDY26_RS24355 (70224) | 70224..70572 | + | 349 | Protein_71 | DUF6404 family protein | - |
| QDY26_RS24360 (70592) | 70592..71182 | - | 591 | WP_000194553.1 | hypothetical protein | - |
| QDY26_RS24365 (71182) | 71182..71439 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| QDY26_RS24370 (71790) | 71790..72791 | + | 1002 | WP_264107239.1 | DUF4238 domain-containing protein | - |
| QDY26_RS24375 (72967) | 72967..73311 | - | 345 | WP_000793307.1 | hypothetical protein | - |
| QDY26_RS24380 (73897) | 73897..74601 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| QDY26_RS24385 (74635) | 74635..74892 | - | 258 | WP_001596999.1 | hypothetical protein | - |
| QDY26_RS24390 (74937) | 74937..75863 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| QDY26_RS24395 (76395) | 76395..76808 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| QDY26_RS24400 (76810) | 76810..77589 | + | 780 | WP_021537353.1 | site-specific integrase | - |
| QDY26_RS24405 (77769) | 77769..78413 | + | 645 | WP_001144036.1 | ParA family protein | - |
| QDY26_RS24410 (78500) | 78500..78808 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| QDY26_RS24415 (79222) | 79222..80202 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| QDY26_RS24420 (80195) | 80195..80611 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| QDY26_RS24425 (80613) | 80613..81887 | - | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| QDY26_RS24430 (81887) | 81887..82324 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QDY26_RS24435 (82321) | 82321..82569 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| QDY26_RS24440 (82987) | 82987..83889 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| QDY26_RS24445 (83886) | 83886..84197 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| QDY26_RS24450 (84274) | 84274..84957 | + | 684 | WP_000086178.1 | DNA methylase | - |
| QDY26_RS24455 (84958) | 84958..85179 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| QDY26_RS24460 (85139) | 85139..85625 | + | 487 | Protein_92 | DUF1380 family protein | - |
| QDY26_RS24465 (85676) | 85676..86446 | + | 771 | WP_001044393.1 | hypothetical protein | - |
| QDY26_RS24470 (86864) | 86864..87289 | + | 426 | WP_001198886.1 | antirestriction protein | - |
| QDY26_RS24475 (87336) | 87336..87758 | + | 423 | WP_000271729.1 | DUF1380 family protein | - |
| QDY26_RS24480 (87755) | 87755..87946 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| QDY26_RS24485 (88224) | 88224..89891 | - | 1668 | WP_001762494.1 | group II intron reverse transcriptase/maturase | - |
| QDY26_RS24490 (90622) | 90622..90690 | - | 69 | Protein_98 | pilus protein | - |
| QDY26_RS24495 (91059) | 91059..91586 | + | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| QDY26_RS24500 (91644) | 91644..91877 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| QDY26_RS24505 (91936) | 91936..93894 | + | 1959 | WP_021265661.1 | ParB/RepB/Spo0J family partition protein | - |
| QDY26_RS24510 (93949) | 93949..94383 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| QDY26_RS24515 (94380) | 94380..95099 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| QDY26_RS24520 (95096) | 95096..95692 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| QDY26_RS24525 (96155) | 96155..96655 | + | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| QDY26_RS24530 (97384) | 97384..97818 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| QDY26_RS24535 (97910) | 97910..98176 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| QDY26_RS24540 (98241) | 98241..99182 | + | 942 | WP_000038339.1 | ISNCY family transposase ISSen7 | VF |
| QDY26_RS24545 (99244) | 99244..99414 | + | 171 | WP_000150325.1 | hypothetical protein | - |
| QDY26_RS24550 (99445) | 99445..99696 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| QDY26_RS24555 (100276) | 100276..101124 | + | 849 | WP_001077047.1 | DUF4942 domain-containing protein | - |
| QDY26_RS24560 (101209) | 101209..101544 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| QDY26_RS24565 (101778) | 101778..102110 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli | Conjugative plasmid | TA6370, TA30448 | NC_023329 | 1..104399 | 0.007 |