MGE detailed information
MGE type: Conjugative plasmid MGE length: 120673 bp
Accession: NZ_CP122622 Location: 1..120673 Organism: Escherichia coli strain ETEC4090 Replicon: plasmid unnamed2
Accession: NZ_CP122622 Location: 1..120673 Organism: Escherichia coli strain ETEC4090 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW69_RS26895 (1) | 1..270 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QDW69_RS26900 (270) | 270..548 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QDW69_RS26905 (857) | 857..1999 | + | 1143 | WP_158649904.1 | YiiX/YebB-like N1pC/P60 family cysteine hydrolase | - |
| QDW69_RS26910 (1972) | 1972..2076 | + | 105 | Protein_3 | hypothetical protein | - |
| QDW69_RS26915 (2088) | 2088..2999 | + | 912 | WP_024244186.1 | hypothetical protein | VF |
| QDW69_RS26920 (3141) | 3141..3536 | - | 396 | WP_000445930.1 | plasmid partitioning/stability family protein | - |
| QDW69_RS26925 (3536) | 3536..4495 | - | 960 | WP_000921958.1 | plasmid segregation protein ParM | - |
| QDW69_RS26930 (4934) | 4934..5836 | + | 903 | WP_001393259.1 | DUF1281 domain-containing protein | - |
| QDW69_RS26935 (5833) | 5833..6143 | + | 311 | Protein_8 | hypothetical protein | - |
| QDW69_RS26940 (6219) | 6219..6902 | + | 684 | WP_042634423.1 | DNA methylase | - |
| QDW69_RS26945 (6903) | 6903..7124 | + | 222 | WP_001104893.1 | hypothetical protein | - |
| QDW69_RS26950 (7054) | 7054..7570 | + | 517 | Protein_11 | DUF1380 family protein | - |
| QDW69_RS26955 (7621) | 7621..8397 | + | 777 | WP_045909438.1 | hypothetical protein | - |
| QDW69_RS26960 (8811) | 8811..9236 | + | 426 | WP_042634408.1 | antirestriction protein | - |
| QDW69_RS26965 (9283) | 9283..9705 | + | 423 | WP_096095854.1 | DUF1380 family protein | - |
| QDW69_RS26970 (9702) | 9702..9893 | + | 192 | WP_001027504.1 | hypothetical protein | - |
| QDW69_RS26975 (9890) | 9890..10045 | + | 156 | WP_157918499.1 | hypothetical protein | - |
| QDW69_RS26980 (10256) | 10256..10410 | - | 155 | Protein_17 | hypothetical protein | - |
| QDW69_RS26985 (10927) | 10927..11157 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| QDW69_RS26990 (11209) | 11209..12570 | + | 1362 | WP_063078170.1 | DUF3560 domain-containing protein | - |
| QDW69_RS26995 (12617) | 12617..13180 | + | 564 | WP_042634411.1 | class I SAM-dependent methyltransferase | - |
| QDW69_RS27000 (13786) | 13786..13992 | + | 207 | WP_000547945.1 | hypothetical protein | - |
| QDW69_RS27005 (14018) | 14018..14548 | + | 531 | WP_032214168.1 | single-stranded DNA-binding protein | - |
| QDW69_RS27010 (14604) | 14604..14837 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| QDW69_RS27015 (14901) | 14901..16858 | + | 1958 | Protein_24 | ParB/RepB/Spo0J family partition protein | - |
| QDW69_RS27020 (16913) | 16913..17347 | + | 435 | WP_042634413.1 | conjugation system SOS inhibitor PsiB | - |
| QDW69_RS27025 (17344) | 17344..18063 | + | 720 | WP_042634414.1 | plasmid SOS inhibition protein A | - |
| QDW69_RS27030 (18063) | 18063..18581 | + | 519 | WP_001178554.1 | hypothetical protein | - |
| - (18557) | 18557..18705 | + | 149 | NuclAT_0 | - | Antitoxin Detail |
| - (18557) | 18557..18705 | + | 149 | NuclAT_0 | - | Antitoxin Detail |
| - (18557) | 18557..18705 | + | 149 | NuclAT_0 | - | Antitoxin Detail |
| - (18557) | 18557..18705 | + | 149 | NuclAT_0 | - | Antitoxin Detail |
| QDW69_RS27035 (18771) | 18771..18848 | + | 78 | Protein_28 | DUF5431 family protein | - |
| QDW69_RS27040 (18814) | 18814..18915 | + | 102 | WP_151318007.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QDW69_RS27045 (19216) | 19216..19512 | - | 297 | Protein_30 | hypothetical protein | - |
| QDW69_RS27050 (19736) | 19736..20032 | + | 297 | WP_001272240.1 | hypothetical protein | - |
| QDW69_RS27055 (20138) | 20138..20959 | + | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| QDW69_RS27060 (21256) | 21256..21858 | - | 603 | WP_000243703.1 | hypothetical protein | VF |
| QDW69_RS27065 (22179) | 22179..22562 | + | 384 | WP_001151530.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QDW69_RS27070 (22694) | 22694..23401 | + | 708 | WP_250697969.1 | transcriptional regulator TraJ family protein | - |
| QDW69_RS27075 (23521) | 23521..23748 | + | 228 | WP_000589558.1 | conjugal transfer relaxosome protein TraY | - |
| QDW69_RS27080 (23782) | 23782..24144 | + | 363 | WP_033566647.1 | type IV conjugative transfer system pilin TraA | - |
| QDW69_RS27085 (24149) | 24149..24460 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| QDW69_RS27090 (24482) | 24482..25048 | + | 567 | WP_000399793.1 | type IV conjugative transfer system protein TraE | - |
| QDW69_RS27095 (25035) | 25035..25763 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| QDW69_RS27100 (25763) | 25763..27190 | + | 1428 | WP_236475986.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QDW69_RS27105 (27180) | 27180..27752 | + | 573 | WP_000002780.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QDW69_RS27110 (27749) | 27749..28066 | + | 318 | WP_236475987.1 | conjugal transfer protein TrbD | - |
| QDW69_RS27115 (28063) | 28063..28314 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| QDW69_RS27120 (28311) | 28311..28826 | + | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QDW69_RS27125 (28960) | 28960..29181 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| QDW69_RS27130 (29341) | 29341..31968 | + | 2628 | WP_001064268.1 | type IV secretion system protein TraC | - |
| QDW69_RS27135 (31965) | 31965..32351 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| QDW69_RS27140 (32348) | 32348..32980 | + | 633 | WP_001377749.1 | type-F conjugative transfer system protein TraW | - |
| QDW69_RS27145 (32977) | 32977..33969 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| QDW69_RS27150 (33995) | 33995..34456 | + | 462 | WP_000277845.1 | hypothetical protein | - |
| QDW69_RS27155 (34486) | 34486..34938 | + | 453 | WP_000069427.1 | hypothetical protein | - |
| QDW69_RS27160 (34966) | 34966..35604 | + | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QDW69_RS27165 (35601) | 35601..37409 | + | 1809 | WP_000821821.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QDW69_RS27170 (37436) | 37436..37693 | + | 258 | WP_000864317.1 | conjugal transfer protein TrbE | - |
| QDW69_RS27175 (37686) | 37686..38429 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QDW69_RS27180 (38445) | 38445..38792 | + | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| QDW69_RS27185 (38794) | 38794..39108 | - | 315 | WP_000415566.1 | protein ArtA | - |
| QDW69_RS27190 (39189) | 39189..39473 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QDW69_RS27195 (39460) | 39460..40005 | + | 546 | WP_282868248.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QDW69_RS27200 (39935) | 39935..40276 | + | 342 | WP_071528036.1 | P-type conjugative transfer protein TrbJ | - |
| QDW69_RS27205 (40263) | 40263..40655 | + | 393 | WP_042634327.1 | F-type conjugal transfer protein TrbF | - |
| QDW69_RS27210 (40642) | 40642..42015 | + | 1374 | WP_042634326.1 | conjugal transfer pilus assembly protein TraH | - |
| QDW69_RS27215 (42012) | 42012..44831 | + | 2820 | WP_096095908.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QDW69_RS27220 (44850) | 44850..45347 | + | 498 | WP_000605862.1 | entry exclusion protein | - |
| QDW69_RS27225 (45380) | 45380..46111 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| QDW69_RS27230 (46314) | 46314..47051 | + | 738 | WP_000199911.1 | hypothetical protein | - |
| QDW69_RS27235 (47102) | 47102..49372 | + | 2271 | WP_282868249.1 | type IV conjugative transfer system coupling protein TraD | - |
| QDW69_RS27240 (49372) | 49372..54642 | + | 5271 | WP_230905570.1 | Multifunctional conjugation protein TraI | Relaxase |
| QDW69_RS27245 (54662) | 54662..55408 | + | 747 | WP_000205735.1 | conjugal transfer pilus acetylase TraX | - |
| QDW69_RS27250 (55463) | 55463..56023 | + | 561 | WP_000139348.1 | fertility inhibition protein FinO | - |
| QDW69_RS27255 (56158) | 56158..56370 | + | 213 | WP_001385659.1 | hypothetical protein | - |
| QDW69_RS27260 (56657) | 56657..57334 | + | 678 | WP_000392235.1 | PIN domain-containing protein | - |
| QDW69_RS27265 (57713) | 57713..57904 | + | 192 | WP_071849536.1 | hypothetical protein | - |
| QDW69_RS27270 (58148) | 58148..58609 | + | 462 | WP_069040904.1 | thermonuclease family protein | - |
| QDW69_RS27275 (58655) | 58655..58864 | + | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| QDW69_RS27280 (58902) | 58902..59492 | + | 591 | WP_012817838.1 | DUF2726 domain-containing protein | - |
| QDW69_RS27285 (59732) | 59732..59992 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| QDW69_RS27290 (60018) | 60018..60254 | - | 237 | WP_244569896.1 | replication protein RepA | - |
| QDW69_RS27295 (60245) | 60245..60292 | + | 48 | WP_077822033.1 | hypothetical protein | - |
| QDW69_RS27300 (60285) | 60285..61142 | + | 858 | WP_282868250.1 | incFII family plasmid replication initiator RepA | - |
| QDW69_RS27305 (62052) | 62052..62336 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| QDW69_RS27310 (62336) | 62336..62611 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDW69_RS27315 (62894) | 62894..64081 | - | 1188 | WP_000937591.1 | IS91 family transposase ISEc37 | Transposase |
| QDW69_RS27320 (64081) | 64081..64446 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| QDW69_RS27325 (64869) | 64869..65342 | - | 474 | WP_001122138.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| QDW69_RS27330 (66133) | 66133..66228 | - | 96 | WP_000609147.1 | DinQ-like type I toxin DqlB | - |
| QDW69_RS27335 (66681) | 66681..67103 | - | 423 | WP_001398192.1 | hypothetical protein | - |
| QDW69_RS27340 (67275) | 67275..67538 | - | 264 | WP_000063165.1 | hypothetical protein | - |
| QDW69_RS27345 (67677) | 67677..69089 | - | 1413 | Protein_90 | DNA topoisomerase | - |
| QDW69_RS27350 (69171) | 69171..69536 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| QDW69_RS27355 (69536) | 69536..70723 | + | 1188 | WP_116794643.1 | IS91 family transposase IS91 | Transposase |
| QDW69_RS27360 (71000) | 71000..71365 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| QDW69_RS27365 (71365) | 71365..72552 | + | 1188 | WP_000937591.1 | IS91 family transposase ISEc37 | Transposase |
| QDW69_RS27370 (72941) | 72941..73156 | - | 216 | WP_001180116.1 | hypothetical protein | - |
| QDW69_RS27375 (73146) | 73146..73391 | - | 246 | WP_000356545.1 | hypothetical protein | - |
| QDW69_RS27380 (73436) | 73436..73759 | - | 324 | WP_001181907.1 | hypothetical protein | - |
| QDW69_RS27385 (73905) | 73905..74186 | - | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDW69_RS27390 (74176) | 74176..74427 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| QDW69_RS27395 (75661) | 75661..76497 | + | 837 | WP_282868244.1 | replication initiation protein | - |
| QDW69_RS27400 (76537) | 76537..76983 | + | 447 | WP_000057426.1 | hypothetical protein | - |
| QDW69_RS27405 (77120) | 77120..77476 | + | 357 | WP_000456533.1 | DNA distortion polypeptide 3 | - |
| QDW69_RS27410 (77473) | 77473..78450 | - | 978 | WP_001269910.1 | hypothetical protein | - |
| QDW69_RS27415 (78475) | 78475..78756 | - | 282 | WP_001185482.1 | hypothetical protein | - |
| QDW69_RS27420 (78854) | 78854..79516 | - | 663 | WP_000516400.1 | division plane positioning ATPase MipZ | - |
| QDW69_RS27425 (79897) | 79897..80541 | + | 645 | WP_000203396.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QDW69_RS27430 (80696) | 80696..80779 | - | 84 | WP_000565612.1 | damage-inducible type I toxin DinQ | - |
| QDW69_RS27435 (81565) | 81565..82752 | - | 1188 | WP_000937591.1 | IS91 family transposase ISEc37 | Transposase |
| QDW69_RS27440 (82752) | 82752..83117 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| QDW69_RS27445 (83202) | 83202..83396 | + | 195 | Protein_110 | carbohydrate transporter | - |
| QDW69_RS27450 (83412) | 83412..83582 | + | 171 | WP_162779668.1 | hypothetical protein | - |
| QDW69_RS27455 (83613) | 83613..84192 | + | 580 | Protein_112 | transposase | - |
| QDW69_RS27460 (84812) | 84812..85327 | + | 516 | WP_282868245.1 | hypothetical protein | VF |
| QDW69_RS27465 (85420) | 85420..87834 | + | 2415 | WP_000747724.1 | Outer membrane usher protein YraJ | VF |
| QDW69_RS27470 (87827) | 87827..88519 | + | 693 | WP_001037287.1 | Chaperone protein FaeE | VF |
| QDW69_RS27475 (88482) | 88482..89021 | + | 540 | WP_282868246.1 | F18 fimbrial subunit FedE | - |
| QDW69_RS27480 (89319) | 89319..90221 | + | 903 | WP_282868251.1 | F18 fimbrial adhesin subunit FedF | - |
| QDW69_RS27485 (90402) | 90402..90711 | + | 310 | Protein_118 | IS3 family transposase | - |
| QDW69_RS27490 (91239) | 91239..92054 | - | 816 | WP_000941741.1 | HTH-type transcriptional activator RhaR | VF |
| QDW69_RS27495 (92560) | 92560..92790 | + | 231 | WP_219789736.1 | hypothetical protein | - |
| QDW69_RS27500 (93010) | 93010..93516 | - | 507 | WP_000939423.1 | thiol peroxidase | - |
| QDW69_RS27505 (93736) | 93736..94296 | - | 561 | Protein_122 | IS91 family transposase IS91 | Transposase |
| QDW69_RS27510 (94887) | 94887..95228 | - | 342 | Protein_123 | IS3 family transposase | - |
| QDW69_RS27515 (95306) | 95306..96742 | - | 1437 | WP_000860467.1 | Hemolysin secretion protein D, plasmid | VF |
| QDW69_RS27520 (96761) | 96761..98884 | - | 2124 | WP_000376539.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| QDW69_RS27525 (98956) | 98956..102030 | - | 3075 | WP_039022831.1 | Hemolysin, plasmid | VF |
| QDW69_RS27530 (102042) | 102042..102554 | - | 513 | WP_001372478.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| QDW69_RS27535 (103037) | 103037..104265 | - | 1229 | Protein_128 | IS3 family transposase | - |
| QDW69_RS27545 (106165) | 106165..107352 | - | 1188 | WP_000937591.1 | IS91 family transposase ISEc37 | Transposase |
| QDW69_RS27550 (107352) | 107352..107717 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| QDW69_RS27555 (107994) | 107994..109181 | - | 1188 | WP_116794643.1 | IS91 family transposase IS91 | Transposase |
| QDW69_RS27560 (109181) | 109181..109546 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| QDW69_RS27565 (109635) | 109635..110315 | + | 681 | Protein_134 | IS66 family transposase ISCro1 | Transposase |
| QDW69_RS27570 (110353) | 110353..110679 | - | 327 | Protein_135 | oxidoreductase | - |
| QDW69_RS27575 (110684) | 110684..111644 | - | 961 | Protein_136 | IS3 family transposase | - |
| QDW69_RS27580 (112032) | 112032..112247 | - | 216 | WP_015056453.1 | heat-stable enterotoxin ST-II | - |
| QDW69_RS27585 (112453) | 112453..113150 | + | 698 | WP_282868247.1 | IS1 family transposase IS1R | Transposase |
| QDW69_RS27590 (113287) | 113287..113769 | + | 483 | WP_042634449.1 | ATP-binding protein | - |
| QDW69_RS27595 (113822) | 113822..114072 | - | 251 | Protein_140 | hypothetical protein | - |
| QDW69_RS27600 (114260) | 114260..115447 | - | 1188 | WP_042634447.1 | IS91 family transposase ISEc37 | Transposase |
| QDW69_RS27605 (115447) | 115447..115812 | - | 366 | WP_000124135.1 | hypothetical protein | - |
| QDW69_RS27610 (115847) | 115847..116305 | - | 459 | Protein_143 | transposase | - |
| QDW69_RS27615 (116383) | 116383..116532 | - | 150 | Protein_144 | IS3 family transposase ISKpn37 | Transposase |
| QDW69_RS27620 (117041) | 117041..117259 | + | 219 | WP_001353651.1 | Heat-stable enterotoxin ST-IA/ST-P | VF |
| QDW69_RS27630 (118843) | 118843..119235 | - | 393 | Protein_147 | IS21 family transposase IS21 | Transposase |
| QDW69_RS27635 (119235) | 119235..120407 | - | 1173 | WP_015056461.1 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|