MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP122318 Location: 128178..160058 Organism: Escherichia coli strain HT873X1 Replicon: chromosome
Accession: NZ_CP122318 Location: 128178..160058 Organism: Escherichia coli strain HT873X1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QCG45_RS00635 (124362) | 124362..125630 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| QCG45_RS00640 (125650) | 125650..126627 | - | 978 | WP_000993126.1 | glutarate dioxygenase GlaH | - |
| QCG45_RS00645 (126963) | 126963..129215 | - | 2253 | Protein_123 | alpha-amylase family glycosyl hydrolase | - |
| QCG45_RS00655 (130601) | 130601..131974 | + | 1374 | Protein_124 | DUF5507 domain-containing protein | - |
| QCG45_RS00660 (132368) | 132368..132547 | + | 180 | WP_087676347.1 | DNA invertase | - |
| QCG45_RS00665 (132702) | 132702..132821 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| QCG45_RS00670 (132886) | 132886..137466 | + | 4581 | WP_010723187.1 | putative autotransporter | VF |
| QCG45_RS00675 (137830) | 137830..138159 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| QCG45_RS00680 (138180) | 138180..138497 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QCG45_RS00685 (138535) | 138535..138735 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| QCG45_RS00690 (138744) | 138744..139226 | - | 483 | WP_001407480.1 | RadC family protein | - |
| QCG45_RS00695 (139235) | 139235..139693 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| QCG45_RS00700 (139796) | 139796..139980 | - | 185 | Protein_133 | DUF905 family protein | - |
| QCG45_RS00705 (140591) | 140591..142294 | - | 1704 | WP_000896263.1 | protein YfjW | - |
| QCG45_RS00710 (142436) | 142436..143445 | + | 1010 | Protein_135 | arsenic transporter | - |
| QCG45_RS00715 (143458) | 143458..143610 | + | 153 | Protein_136 | arsenate reductase | - |
| QCG45_RS00720 (143997) | 143997..144464 | - | 468 | WP_000702495.1 | protein YfjT | - |
| QCG45_RS00725 (144488) | 144488..144931 | - | 444 | WP_000824222.1 | lipoprotein YfjS | - |
| QCG45_RS00730 (144931) | 144931..145167 | - | 237 | WP_001144029.1 | protein YpjK | - |
| QCG45_RS00735 (145208) | 145208..145909 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| QCG45_RS00740 (146126) | 146126..146947 | - | 822 | WP_000197391.1 | DUF932 domain-containing protein | - |
| QCG45_RS00745 (147039) | 147039..147902 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| QCG45_RS00750 (148257) | 148257..148628 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| QCG45_RS00755 (148621) | 148621..149694 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| QCG45_RS00760 (149836) | 149836..150099 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| QCG45_RS00765 (150459) | 150459..152075 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| QCG45_RS00770 (152072) | 152072..154261 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| QCG45_RS00775 (154439) | 154439..155065 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| QCG45_RS00780 (155218) | 155218..156627 | - | 1410 | WP_000481742.1 | YfjI family protein | - |
| QCG45_RS00785 (156756) | 156756..156968 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| QCG45_RS00790 (157012) | 157012..157968 | + | 957 | WP_000510827.1 | protein YfjH | - |
| QCG45_RS00795 (158212) | 158212..159453 | - | 1242 | WP_000101723.1 | Prophage integrase IntA ; Integrase | Integrase |
| QCG45_RS00805 (160234) | 160234..160716 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| QCG45_RS00810 (160887) | 160887..161324 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| QCG45_RS00815 (161314) | 161314..161604 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| QCG45_RS00820 (161666) | 161666..162007 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| QCG45_RS00825 (162156) | 162156..163817 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| QCG45_RS00830 (163903) | 163903..164781 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |