MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP122316 Location: 94764..126644 Organism: Escherichia coli strain HT-946 Replicon: chromosome
Accession: NZ_CP122316 Location: 94764..126644 Organism: Escherichia coli strain HT-946 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QCG48_RS00500 (90948) | 90948..92216 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| QCG48_RS00505 (92236) | 92236..93213 | - | 978 | WP_000993126.1 | glutarate dioxygenase GlaH | - |
| QCG48_RS00510 (93549) | 93549..95801 | - | 2253 | Protein_96 | alpha-amylase family glycosyl hydrolase | - |
| QCG48_RS00520 (97187) | 97187..98560 | + | 1374 | Protein_97 | DUF5507 domain-containing protein | - |
| QCG48_RS00525 (98954) | 98954..99133 | + | 180 | WP_087676347.1 | DNA invertase | - |
| QCG48_RS00530 (99288) | 99288..99407 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| QCG48_RS00535 (99472) | 99472..104052 | + | 4581 | WP_010723187.1 | putative autotransporter | VF |
| QCG48_RS00540 (104416) | 104416..104745 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| QCG48_RS00545 (104766) | 104766..105083 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QCG48_RS00550 (105121) | 105121..105321 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| QCG48_RS00555 (105330) | 105330..105812 | - | 483 | WP_001407480.1 | RadC family protein | - |
| QCG48_RS00560 (105821) | 105821..106279 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| QCG48_RS00565 (106382) | 106382..106566 | - | 185 | Protein_106 | DUF905 family protein | - |
| QCG48_RS00570 (107177) | 107177..108880 | - | 1704 | WP_000896263.1 | protein YfjW | - |
| QCG48_RS00575 (109022) | 109022..110031 | + | 1010 | Protein_108 | arsenic transporter | - |
| QCG48_RS00580 (110044) | 110044..110196 | + | 153 | Protein_109 | arsenate reductase | - |
| QCG48_RS00585 (110583) | 110583..111050 | - | 468 | WP_000702495.1 | protein YfjT | - |
| QCG48_RS00590 (111074) | 111074..111517 | - | 444 | WP_000824222.1 | lipoprotein YfjS | - |
| QCG48_RS00595 (111517) | 111517..111753 | - | 237 | WP_001144029.1 | protein YpjK | - |
| QCG48_RS00600 (111794) | 111794..112495 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| QCG48_RS00605 (112712) | 112712..113533 | - | 822 | WP_000197391.1 | DUF932 domain-containing protein | - |
| QCG48_RS00610 (113625) | 113625..114488 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| QCG48_RS00615 (114843) | 114843..115214 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| QCG48_RS00620 (115207) | 115207..116280 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| QCG48_RS00625 (116422) | 116422..116685 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| QCG48_RS00630 (117045) | 117045..118661 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| QCG48_RS00635 (118658) | 118658..120847 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| QCG48_RS00640 (121025) | 121025..121651 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| QCG48_RS00645 (121804) | 121804..123213 | - | 1410 | WP_000481742.1 | YfjI family protein | - |
| QCG48_RS00650 (123342) | 123342..123554 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| QCG48_RS00655 (123598) | 123598..124554 | + | 957 | WP_000510827.1 | protein YfjH | - |
| QCG48_RS00660 (124798) | 124798..126039 | - | 1242 | WP_000101723.1 | Prophage integrase IntA ; Integrase | Integrase |
| QCG48_RS00670 (126820) | 126820..127302 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| QCG48_RS00675 (127473) | 127473..127910 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| QCG48_RS00680 (127900) | 127900..128190 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| QCG48_RS00685 (128252) | 128252..128593 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| QCG48_RS00690 (128742) | 128742..130403 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| QCG48_RS00695 (130489) | 130489..131367 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |