MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 129738 bp
Accession: NZ_CP119729 Location: 1..129738 Organism: Escherichia coli strain E16 Replicon: plasmid pE16-3
Accession: NZ_CP119729 Location: 1..129738 Organism: Escherichia coli strain E16 Replicon: plasmid pE16-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P1J20_RS26090 (P1J20_26090) | 514..762 | + | 249 | WP_033810804.1 | cell growth regulatory protein MazE | - |
| P1J20_RS26095 (P1J20_26095) | 762..1106 | + | 345 | WP_032354044.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| P1J20_RS26100 (P1J20_26100) | 1142..1363 | - | 222 | Protein_3 | IS256 family transposase IS1414 | Transposase |
| P1J20_RS26105 (P1J20_26105) | 1417..2609 | + | 1193 | Protein_4 | IS3 family transposase | - |
| P1J20_RS26110 (P1J20_26110) | 3205..3939 | - | 735 | WP_250388927.1 | IS21 family transposase IS100kyp | Transposase |
| P1J20_RS26115 (P1J20_26115) | 3984..5006 | - | 1023 | WP_276170861.1 | IS21 family transposase IS100kyp | Transposase |
| P1J20_RS26120 (P1J20_26120) | 7152..8380 | + | 1229 | WP_162829751.1 | IS3 family transposase IS2 | Transposase |
| P1J20_RS26125 (P1J20_26125) | 8582..8827 | + | 246 | WP_045148228.1 | hypothetical protein | - |
| P1J20_RS26130 (P1J20_26130) | 8914..10122 | + | 1209 | Protein_9 | IS256 family transposase IS1414 | Transposase |
| P1J20_RS26135 (P1J20_26135) | 10554..12683 | - | 2130 | Protein_10 | F-type conjugative transfer protein TrbC | - |
| P1J20_RS26140 (P1J20_26140) | 12664..13788 | - | 1125 | WP_053287745.1 | DsbC family protein | - |
| P1J20_RS26145 (P1J20_26145) | 13785..15047 | - | 1263 | WP_084818444.1 | IncI1-type conjugal transfer protein TrbA | - |
| P1J20_RS26150 (P1J20_26150) | 15712..16179 | - | 468 | WP_045145415.1 | thermonuclease family protein | - |
| P1J20_RS26155 (P1J20_26155) | 16344..16967 | + | 624 | WP_045145414.1 | helix-turn-helix domain-containing protein | - |
| P1J20_RS26160 (P1J20_26160) | 17165..17380 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| P1J20_RS26165 (P1J20_26165) | 17384..17752 | - | 369 | WP_001302696.1 | hypothetical protein | - |
| P1J20_RS26170 (P1J20_26170) | 17764..17955 | - | 192 | WP_000751583.1 | hypothetical protein | - |
| P1J20_RS26175 (P1J20_26175) | 18052..18294 | - | 243 | WP_000650933.1 | hypothetical protein | - |
| P1J20_RS26180 (P1J20_26180) | 18623..18775 | + | 153 | WP_021532728.1 | Hok/Gef family protein | - |
| P1J20_RS26185 (P1J20_26185) | 19344..19496 | + | 153 | WP_001536636.1 | Hok/Gef family protein | - |
| P1J20_RS26190 (P1J20_26190) | 19810..20454 | - | 645 | WP_084818443.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| P1J20_RS26195 (P1J20_26195) | 20541..22706 | - | 2166 | WP_276170863.1 | DotA/TraY family protein | - |
| P1J20_RS26200 (P1J20_26200) | 22779..23348 | - | 570 | WP_000650755.1 | conjugal transfer protein TraX | - |
| P1J20_RS26205 (P1J20_26205) | 23345..24496 | - | 1152 | WP_276170866.1 | conjugal transfer protein TraW | - |
| P1J20_RS26210 (P1J20_26210) | 24496..25554 | - | 1059 | Protein_25 | putative protein YggR | VF |
| P1J20_RS26215 (P1J20_26215) | 25538..26374 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| P1J20_RS26220 (P1J20_26220) | 26371..26829 | - | 459 | WP_045145391.1 | DotD/TraH family lipoprotein | - |
| P1J20_RS26225 (P1J20_26225) | 26933..28135 | - | 1203 | WP_077892228.1 | conjugal transfer protein TraF | - |
| P1J20_RS26230 (P1J20_26230) | 28237..29058 | - | 822 | WP_072657231.1 | conjugal transfer protein TraE | - |
| P1J20_RS26235 (P1J20_26235) | 29318..29638 | + | 321 | WP_000695052.1 | hypothetical protein | - |
| P1J20_RS26240 (P1J20_26240) | 29730..30020 | - | 291 | WP_021532709.1 | hypothetical protein | - |
| P1J20_RS26245 (P1J20_26245) | 30062..31231 | - | 1170 | WP_021532708.1 | site-specific integrase | - |
| P1J20_RS26250 (P1J20_26250) | 32781..34028 | - | 1248 | WP_097728071.1 | hypothetical protein | VF |
| P1J20_RS26255 (P1J20_26255) | 34025..34732 | - | 708 | WP_153789788.1 | A24 family peptidase | - |
| P1J20_RS26260 (P1J20_26260) | 34692..35168 | - | 477 | WP_021532704.1 | hypothetical protein | VF |
| P1J20_RS26265 (P1J20_26265) | 35227..35763 | - | 537 | WP_021532703.1 | type 4 pilus major pilin | - |
| P1J20_RS26270 (P1J20_26270) | 35813..36913 | - | 1101 | WP_072667218.1 | hypothetical protein | VF |
| P1J20_RS26275 (P1J20_26275) | 36915..38423 | - | 1509 | WP_276170864.1 | hypothetical protein | VF |
| P1J20_RS26280 (P1J20_26280) | 38520..39194 | - | 675 | WP_226256164.1 | hypothetical protein | - |
| P1J20_RS26285 (P1J20_26285) | 39326..39766 | - | 441 | WP_128999396.1 | hypothetical protein | - |
| P1J20_RS26290 (P1J20_26290) | 39815..40267 | - | 453 | WP_021532698.1 | hypothetical protein | VF |
| P1J20_RS26295 (P1J20_26295) | 40257..41552 | - | 1296 | WP_021532697.1 | type 4b pilus protein PilO2 | - |
| P1J20_RS26300 (P1J20_26300) | 41573..43192 | - | 1620 | WP_021532696.1 | Outer membrane lipoprotein BfpB | VF |
| P1J20_RS26305 (P1J20_26305) | 43223..43660 | - | 438 | WP_084818434.1 | type IV pilus biogenesis protein PilM | - |
| P1J20_RS26310 (P1J20_26310) | 43665..44735 | - | 1071 | WP_021532694.1 | hypothetical protein | VF |
| P1J20_RS26315 (P1J20_26315) | 44857..45252 | + | 396 | WP_276170865.1 | hypothetical protein | - |
| P1J20_RS26320 (P1J20_26320) | 45757..45999 | - | 243 | WP_032354079.1 | PilI type IV pilus biogenesis protein | - |
| P1J20_RS26325 (P1J20_26325) | 46080..47774 | - | 1695 | WP_045145557.1 | flotillin family protein | - |
| P1J20_RS26330 (P1J20_26330) | 47801..48421 | - | 621 | WP_032353888.1 | DUF1449 family protein | - |
| P1J20_RS26335 (P1J20_26335) | 48688..49353 | - | 666 | WP_065203167.1 | traC | - |
| P1J20_RS26340 (P1J20_26340) | 49494..50000 | - | 507 | WP_024187405.1 | transcription termination/antitermination NusG family protein | - |
| P1J20_RS26345 (P1J20_26345) | 50836..51708 | + | 873 | WP_045145554.1 | incFII family plasmid replication initiator RepA | - |
| P1J20_RS26350 (P1J20_26350) | 52403..52570 | + | 168 | WP_065898644.1 | hypothetical protein | - |
| P1J20_RS26355 (P1J20_26355) | 52657..52908 | + | 252 | WP_045145550.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| P1J20_RS26360 (P1J20_26360) | 52905..53192 | + | 288 | WP_032353555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| P1J20_RS26365 (P1J20_26365) | 53202..53489 | + | 288 | WP_045145547.1 | hypothetical protein | - |
| P1J20_RS26370 (P1J20_26370) | 54510..55097 | + | 588 | WP_064550130.1 | colanic acid biosynthesis acetyltransferase | - |
| P1J20_RS26375 (P1J20_26375) | 55377..55970 | - | 594 | WP_032353553.1 | ProQ/FINO family protein | - |
| P1J20_RS26380 (P1J20_26380) | 56824..58011 | - | 1188 | WP_045145541.1 | IS91 family transposase ISEc37 | Transposase |
| P1J20_RS26385 (P1J20_26385) | 58011..58376 | - | 366 | WP_032353961.1 | hypothetical protein | - |
| P1J20_RS26390 (P1J20_26390) | 58395..58757 | + | 363 | WP_225556432.1 | hypothetical protein | - |
| P1J20_RS26395 (P1J20_26395) | 58786..59349 | + | 564 | WP_032353959.1 | pentapeptide repeat-containing protein | - |
| P1J20_RS26400 (P1J20_26400) | 59550..60758 | - | 1209 | WP_072643187.1 | IS256 family transposase IS1414 | Transposase |
| P1J20_RS26405 (P1J20_26405) | 60817..61092 | - | 276 | WP_032354012.1 | PerC family transcriptional regulator | - |
| P1J20_RS26410 (P1J20_26410) | 61182..61916 | + | 735 | WP_032354011.1 | helix-turn-helix domain-containing protein | - |
| P1J20_RS26415 (P1J20_26415) | 62071..62253 | - | 183 | Protein_66 | iron-containing alcohol dehydrogenase | - |
| P1J20_RS26420 (P1J20_26420) | 62326..63078 | + | 753 | Protein_67 | IS3 family transposase ISKpn38 | Transposase |
| P1J20_RS26425 (P1J20_26425) | 63113..66079 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| P1J20_RS26430 (P1J20_26430) | 66083..66643 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| P1J20_RS26435 (P1J20_26435) | 66953..68530 | + | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| P1J20_RS26440 (P1J20_26440) | 68721..69505 | + | 785 | Protein_71 | IS3 family transposase ISKpn38 | Transposase |
| P1J20_RS26445 (P1J20_26445) | 69567..69812 | + | 246 | Protein_72 | IS91 family transposase ISEc37 | Transposase |
| P1J20_RS26450 (P1J20_26450) | 70399..73896 | + | 3498 | WP_123891603.1 | hypothetical protein | VF |
| P1J20_RS26455 (P1J20_26455) | 74085..74810 | - | 726 | Protein_74 | IS256 family transposase IS1414 | Transposase |
| P1J20_RS26460 (P1J20_26460) | 74946..75254 | + | 309 | WP_032354506.1 | IS3 family transposase ISEcB1 | Transposase |
| P1J20_RS26465 (P1J20_26465) | 75294..75773 | - | 480 | Protein_76 | IS3 family transposase IS629 | Transposase |
| P1J20_RS26470 (P1J20_26470) | 75857..77365 | - | 1509 | WP_276170867.1 | group II intron reverse transcriptase/maturase | - |
| P1J20_RS26475 (P1J20_26475) | 78038..78777 | - | 740 | Protein_78 | IS3 family transposase IS629 | Transposase |
| P1J20_RS26480 (P1J20_26480) | 78815..79075 | + | 261 | WP_032353703.1 | hypothetical protein | - |
| P1J20_RS26485 (P1J20_26485) | 79072..79662 | + | 591 | WP_032353705.1 | hypothetical protein | - |
| P1J20_RS26490 (P1J20_26490) | 80183..81541 | + | 1359 | WP_032353707.1 | esterase-like activity of phytase family protein | - |
| P1J20_RS26495 (P1J20_26495) | 81595..82321 | - | 727 | Protein_82 | IS256 family transposase IS1414 | Transposase |
| P1J20_RS26500 (P1J20_26500) | 82429..82809 | + | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
| P1J20_RS26505 (P1J20_26505) | 82806..83153 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| P1J20_RS26510 (P1J20_26510) | 83203..84740 | + | 1538 | Protein_85 | IS66 family transposase ISEc8 | Transposase |
| P1J20_RS26515 (P1J20_26515) | 84879..85154 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| P1J20_RS26520 (P1J20_26520) | 85154..85438 | - | 285 | WP_012006537.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| P1J20_RS26525 (P1J20_26525) | 85939..86529 | + | 591 | WP_000086536.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| P1J20_RS26530 (P1J20_26530) | 86576..86734 | + | 159 | Protein_89 | integrase core domain-containing protein | - |
| P1J20_RS26535 (P1J20_26535) | 86884..87882 | + | 999 | WP_032353474.1 | ABC transporter substrate-binding protein | - |
| P1J20_RS26540 (P1J20_26540) | 87882..88919 | + | 1038 | WP_032353476.1 | Fe(3+) dicitrate transport system permease protein FecD | VF |
| P1J20_RS26545 (P1J20_26545) | 88919..89680 | + | 762 | WP_000020503.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| P1J20_RS26550 (P1J20_26550) | 89737..90924 | + | 1188 | WP_160377741.1 | MFS transporter | - |
| P1J20_RS26555 (P1J20_26555) | 91002..91169 | - | 168 | Protein_94 | bacteriocin immunity protein | - |
| P1J20_RS26560 (P1J20_26560) | 91233..91930 | + | 698 | WP_103215986.1 | IS1-like element IS1A family transposase | - |
| P1J20_RS26565 (P1J20_26565) | 91946..92140 | + | 195 | Protein_96 | helix-turn-helix domain-containing protein | - |
| P1J20_RS26570 (P1J20_26570) | 92400..93263 | - | 864 | WP_021534910.1 | endonuclease/exonuclease/phosphatase family protein | - |
| P1J20_RS26580 (P1J20_26580) | 94373..94762 | - | 390 | WP_045146805.1 | cytochrome b562 | - |
| P1J20_RS26585 (P1J20_26585) | 95147..96634 | - | 1488 | Protein_100 | IncI1-type relaxase NikB | - |
| P1J20_RS26590 (P1J20_26590) | 96819..97049 | + | 231 | WP_001261278.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| P1J20_RS26595 (P1J20_26595) | 97046..97462 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| P1J20_RS26600 (P1J20_26600) | 98024..99237 | + | 1214 | WP_219795283.1 | IS3 family transposase IS629 | Transposase |
| P1J20_RS26605 (P1J20_26605) | 99628..100080 | + | 453 | WP_032353631.1 | acyltransferase | - |
| P1J20_RS26610 (P1J20_26610) | 100112..100297 | - | 186 | WP_032353630.1 | hypothetical protein | - |
| P1J20_RS26615 (P1J20_26615) | 100345..100476 | - | 132 | Protein_106 | IS3 family transposase ISSfl10 | Transposase |
| P1J20_RS26620 (P1J20_26620) | 101458..101676 | + | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| P1J20_RS26625 (P1J20_26625) | 101678..101983 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| P1J20_RS26630 (P1J20_26630) | 101984..102793 | + | 810 | WP_045145707.1 | site-specific integrase | - |
| P1J20_RS26635 (P1J20_26635) | 102966..103319 | + | 354 | WP_000864812.1 | colicin M immunity protein | - |
| P1J20_RS26640 (P1J20_26640) | 103369..104184 | - | 816 | WP_032494159.1 | lipid II-degrading bacteriocin colicin M | - |
| P1J20_RS26645 (P1J20_26645) | 104426..104953 | + | 528 | WP_032353548.1 | colicin B immunity protein | - |
| P1J20_RS26650 (P1J20_26650) | 104971..105633 | - | 663 | Protein_113 | colicin-like pore-forming protein | - |
| P1J20_RS26655 (P1J20_26655) | 105691..106388 | + | 698 | WP_249940384.1 | IS1-like element IS1A family transposase | - |
| P1J20_RS26660 (P1J20_26660) | 106405..107283 | - | 879 | Protein_115 | colicin-like bacteriocin tRNase domain-containing protein | - |
| P1J20_RS26665 (P1J20_26665) | 107469..107957 | + | 489 | Protein_116 | IS91 family transposase ISSod25 | Transposase |
| P1J20_RS26670 (P1J20_26670) | 108094..108369 | - | 276 | WP_001536593.1 | hypothetical protein | - |
| P1J20_RS26675 (P1J20_26675) | 108363..109007 | - | 645 | WP_000633911.1 | AAA family ATPase | - |
| P1J20_RS26680 (P1J20_26680) | 109236..110207 | + | 972 | WP_021580010.1 | plasmid segregation protein ParM | - |
| P1J20_RS26685 (P1J20_26685) | 110212..110604 | + | 393 | WP_000340830.1 | plasmid partitioning/stability family protein | - |
| P1J20_RS26690 (P1J20_26690) | 110609..111880 | - | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| P1J20_RS26695 (P1J20_26695) | 111880..112317 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| P1J20_RS26700 (P1J20_26700) | 112314..112562 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| P1J20_RS26705 (P1J20_26705) | 112980..113882 | + | 903 | WP_123891605.1 | DUF1281 domain-containing protein | - |
| P1J20_RS26710 (P1J20_26710) | 113846..113941 | + | 96 | Protein_125 | hypothetical protein | - |
| P1J20_RS26715 (P1J20_26715) | 114288..114713 | + | 426 | WP_045148058.1 | antirestriction protein | - |
| P1J20_RS26720 (P1J20_26720) | 114760..115179 | + | 420 | WP_000271736.1 | DUF1380 family protein | - |
| P1J20_RS26725 (P1J20_26725) | 115179..115370 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| P1J20_RS26730 (P1J20_26730) | 115703..115771 | - | 69 | Protein_129 | pilus protein | - |
| P1J20_RS26735 (P1J20_26735) | 116140..116667 | + | 528 | WP_029391983.1 | single-stranded DNA-binding protein | - |
| P1J20_RS26740 (P1J20_26740) | 116725..116958 | + | 234 | WP_021534894.1 | DUF905 domain-containing protein | - |
| P1J20_RS26745 (P1J20_26745) | 117022..118980 | + | 1959 | WP_045146531.1 | ParB/RepB/Spo0J family partition protein | - |
| P1J20_RS26750 (P1J20_26750) | 119035..119469 | + | 435 | WP_029391985.1 | conjugation system SOS inhibitor PsiB | - |
| P1J20_RS26755 (P1J20_26755) | 119466..120185 | + | 720 | WP_084818452.1 | plasmid SOS inhibition protein A | - |
| P1J20_RS26760 (P1J20_26760) | 120182..120778 | + | 597 | WP_045146526.1 | hypothetical protein | - |
| P1J20_RS26765 (P1J20_26765) | 121244..121744 | + | 501 | WP_045146524.1 | antirestriction protein ArdA | - |
| P1J20_RS26770 (P1J20_26770) | 121861..122358 | - | 498 | WP_157806653.1 | hypothetical protein | - |
| P1J20_RS26775 (P1J20_26775) | 122476..122910 | + | 435 | WP_084818460.1 | post-segregation killing protein PndC | - |
| P1J20_RS26780 (P1J20_26780) | 123003..123269 | + | 267 | WP_021580018.1 | hypothetical protein | - |
| P1J20_RS26785 (P1J20_26785) | 123334..124296 | + | 963 | WP_084818451.1 | ISNCY family transposase ISRor2 | VF |
| P1J20_RS26790 (P1J20_26790) | 124359..124520 | + | 162 | WP_000150306.1 | hypothetical protein | - |
| P1J20_RS26795 (P1J20_26795) | 124579..124773 | + | 195 | WP_032266355.1 | hypothetical protein | - |
| P1J20_RS26800 (P1J20_26800) | 124804..125055 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| P1J20_RS26805 (P1J20_26805) | 125089..125391 | - | 303 | WP_214669207.1 | hypothetical protein | - |
| P1J20_RS26810 (P1J20_26810) | 125635..126483 | + | 849 | WP_084818449.1 | DUF4942 domain-containing protein | - |
| P1J20_RS26815 (P1J20_26815) | 126569..126904 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| P1J20_RS26820 (P1J20_26820) | 127137..127469 | + | 333 | WP_001291056.1 | plasmid mobilization protein MobA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|