MGE detailed information
MGE type: Prophage MGE length: 8693 bp
Accession: NZ_CP117850 Location: 1314567..1323259 Organism: Salmonella enterica subsp. enterica serovar Mbandaka strain SM_F22R Replicon: chromosome
Accession: NZ_CP117850 Location: 1314567..1323259 Organism: Salmonella enterica subsp. enterica serovar Mbandaka strain SM_F22R Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTZ65_RS06400 (1309601) | 1309601..1310704 | + | 1104 | WP_001528146.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| PTZ65_RS06405 (1310882) | 1310882..1311151 | + | 270 | WP_001275017.1 | DUF1778 domain-containing protein | - |
| PTZ65_RS06410 (1311155) | 1311155..1311673 | + | 519 | WP_000369560.1 | GNAT family N-acetyltransferase | - |
| PTZ65_RS06415 (1311670) | 1311670..1312053 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| PTZ65_RS06420 (1312475) | 1312475..1313584 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| PTZ65_RS06425 (1313644) | 1313644..1314570 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| PTZ65_RS06430 (1314567) | 1314567..1315844 | + | 1278 | WP_000803764.1 | branched chain amino acid ABC transporter permease LivM | - |
| PTZ65_RS06435 (1315841) | 1315841..1316608 | + | 768 | WP_000082083.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| PTZ65_RS06440 (1316610) | 1316610..1317323 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| PTZ65_RS06445 (1317454) | 1317454..1317675 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PTZ65_RS06450 (1317672) | 1317672..1318040 | + | 369 | WP_000174963.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| PTZ65_RS06455 (1318299) | 1318299..1319615 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| PTZ65_RS06460 (1319720) | 1319720..1320607 | + | 888 | WP_000094074.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| PTZ65_RS06465 (1320604) | 1320604..1321449 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| PTZ65_RS06470 (1321452) | 1321452..1322522 | + | 1071 | WP_000907842.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| PTZ65_RS06475 (1322519) | 1322519..1323259 | + | 741 | WP_000073542.1 | glycerophosphodiester phosphodiesterase | - |
| PTZ65_RS06480 (1323272) | 1323272..1323688 | - | 417 | WP_017441613.1 | DUF2756 family protein | - |
| PTZ65_RS06485 (1323814) | 1323814..1325556 | + | 1743 | WP_017441612.1 | gamma-glutamyltransferase | - |
| PTZ65_RS06490 (1325601) | 1325601..1326635 | - | 1035 | WP_017441611.1 | phosphotriesterase | - |
| PTZ65_RS06495 (1326632) | 1326632..1327603 | - | 972 | WP_001038949.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.01 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.01 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.01 |