MGE detailed information
MGE type: Prophage MGE length: 8693 bp
Accession: NZ_CP117696 Location: 327713..336405 Organism: Salmonella enterica subsp. enterica serovar London strain F1 Replicon: chromosome
Accession: NZ_CP117696 Location: 327713..336405 Organism: Salmonella enterica subsp. enterica serovar London strain F1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTQ22_RS01475 (323517) | 323517..324620 | + | 1104 | WP_001528146.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| PTQ22_RS01480 (324704) | 324704..324838 | - | 135 | WP_012219321.1 | hypothetical protein | - |
| PTQ22_RS01485 (324816) | 324816..325199 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| PTQ22_RS01490 (325621) | 325621..326730 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| PTQ22_RS01495 (326790) | 326790..327716 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| PTQ22_RS01500 (327713) | 327713..328990 | + | 1278 | WP_000803764.1 | branched chain amino acid ABC transporter permease LivM | - |
| PTQ22_RS01505 (328987) | 328987..329754 | + | 768 | WP_000082083.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| PTQ22_RS01510 (329756) | 329756..330469 | + | 714 | WP_058805605.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| PTQ22_RS01515 (330600) | 330600..330821 | + | 222 | WP_001522145.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PTQ22_RS01520 (330818) | 330818..331186 | + | 369 | WP_000174963.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| PTQ22_RS01525 (331445) | 331445..332761 | + | 1317 | WP_000624749.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| PTQ22_RS01530 (332866) | 332866..333753 | + | 888 | WP_000094074.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| PTQ22_RS01535 (333750) | 333750..334595 | + | 846 | WP_023256946.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| PTQ22_RS01540 (334598) | 334598..335668 | + | 1071 | WP_000907838.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| PTQ22_RS01545 (335665) | 335665..336405 | + | 741 | WP_000073545.1 | glycerophosphodiester phosphodiesterase | - |
| PTQ22_RS01550 (336402) | 336402..336818 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| PTQ22_RS01555 (336944) | 336944..338686 | + | 1743 | WP_023256947.1 | gamma-glutamyltransferase | - |
| PTQ22_RS01560 (338731) | 338731..339765 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| PTQ22_RS01565 (339762) | 339762..340733 | - | 972 | WP_001038954.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.009 |