MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82983 bp
Accession: NZ_CP117648 Location: 1..82983 Organism: Escherichia albertii strain BIA_16-3 Replicon: plasmid pEA16-3_1
Accession: NZ_CP117648 Location: 1..82983 Organism: Escherichia albertii strain BIA_16-3 Replicon: plasmid pEA16-3_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS048_RS23585 (1) | 1..978 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| PS048_RS23590 (1257) | 1257..1997 | - | 741 | WP_273786662.1 | tyrosine-type recombinase/integrase | - |
| PS048_RS23595 (2118) | 2118..2267 | - | 150 | Protein_2 | transcriptional regulator | - |
| PS048_RS23600 (2755) | 2755..3452 | + | 698 | WP_103215986.1 | IS1-like element IS1A family transposase | - |
| PS048_RS23605 (3591) | 3591..3773 | + | 183 | Protein_4 | IS21 family transposase ISSso4 | Transposase |
| PS048_RS23610 (3907) | 3907..4703 | - | 797 | Protein_5 | IS21 family transposase IS21 | Transposase |
| PS048_RS23615 (4703) | 4703..5876 | - | 1174 | Protein_6 | IS21 family transposase IS21 | Transposase |
| PS048_RS23620 (5962) | 5962..6664 | + | 703 | Protein_7 | IS3 family transposase ISKpn38 | Transposase |
| PS048_RS23625 (6757) | 6757..7525 | + | 769 | Protein_8 | IS3 family transposase IS2 | Transposase |
| PS048_RS23630 (7661) | 7661..7807 | - | 147 | Protein_9 | IS256 family transposase ISSde5 | Transposase |
| PS048_RS23635 (8042) | 8042..8989 | - | 948 | WP_059242586.1 | VirK/YbjX family protein | - |
| PS048_RS23640 (9620) | 9620..10617 | - | 998 | Protein_11 | Lipid A biosynthesis myristoyltransferase | VF |
| PS048_RS23645 (10705) | 10705..11811 | - | 1107 | WP_076742390.1 | glycosyltransferase family 4 protein | - |
| PS048_RS23650 (11811) | 11811..12632 | - | 822 | WP_059259991.1 | polysaccharide deacetylase family protein | - |
| PS048_RS23655 (13224) | 13224..13346 | - | 123 | Protein_14 | transcriptional regulator | - |
| PS048_RS23660 (13416) | 13416..13866 | - | 451 | Protein_15 | IS3 family transposase | - |
| PS048_RS23665 (13867) | 13867..14757 | + | 891 | Protein_16 | IS630 family transposase ISSpu2 | Transposase |
| PS048_RS23670 (15156) | 15156..15577 | + | 422 | Protein_17 | IS3 family transposase ISEc48 | Transposase |
| PS048_RS23675 (15702) | 15702..16915 | + | 1214 | WP_273784564.1 | IS3 family transposase IS629 | Transposase |
| PS048_RS23680 (16990) | 16990..17349 | + | 360 | WP_059257108.1 | type IV conjugative transfer system pilin TraA | - |
| PS048_RS23685 (17364) | 17364..17675 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| PS048_RS23690 (17697) | 17697..18263 | + | 567 | WP_059257107.1 | type IV conjugative transfer system protein TraE | - |
| PS048_RS23695 (18250) | 18250..18978 | + | 729 | WP_059257106.1 | type-F conjugative transfer system secretin TraK | - |
| PS048_RS23700 (18978) | 18978..20405 | + | 1428 | WP_059257105.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| PS048_RS23705 (20395) | 20395..20979 | + | 585 | WP_059257104.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| PS048_RS23710 (20966) | 20966..21286 | + | 321 | WP_059257103.1 | conjugal transfer protein TrbD | - |
| PS048_RS23715 (21283) | 21283..21798 | + | 516 | WP_273786667.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PS048_RS23720 (21933) | 21933..22154 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| PS048_RS23725 (22314) | 22314..24941 | + | 2628 | WP_273786668.1 | type IV secretion system protein TraC | - |
| PS048_RS23730 (24938) | 24938..25324 | + | 387 | WP_059257100.1 | type-F conjugative transfer system protein TrbI | - |
| PS048_RS23735 (25321) | 25321..25953 | + | 633 | WP_059257099.1 | type-F conjugative transfer system protein TraW | - |
| PS048_RS23740 (25950) | 25950..26942 | + | 993 | WP_059257098.1 | conjugal transfer pilus assembly protein TraU | - |
| PS048_RS23745 (26971) | 26971..27306 | + | 336 | WP_073534319.1 | hypothetical protein | - |
| PS048_RS23750 (27299) | 27299..27751 | + | 453 | WP_059257097.1 | hypothetical protein | - |
| PS048_RS23755 (27779) | 27779..28417 | + | 639 | WP_059257096.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| PS048_RS23760 (28414) | 28414..28785 | + | 372 | WP_059257095.1 | hypothetical protein | - |
| PS048_RS23765 (28810) | 28810..29231 | + | 422 | Protein_36 | HNH endonuclease signature motif containing protein | - |
| PS048_RS23770 (29228) | 29228..31036 | + | 1809 | WP_059257093.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| PS048_RS23775 (31063) | 31063..31323 | + | 261 | WP_000864323.1 | conjugal transfer protein TrbE | - |
| PS048_RS23780 (31316) | 31316..32059 | + | 744 | WP_059257092.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| PS048_RS23785 (32073) | 32073..32414 | + | 342 | WP_273786678.1 | conjugal transfer protein TrbA | - |
| PS048_RS23790 (32395) | 32395..32730 | - | 336 | WP_059257091.1 | hypothetical protein | - |
| PS048_RS23795 (32812) | 32812..33096 | + | 285 | WP_059257090.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PS048_RS23800 (33083) | 33083..33634 | + | 552 | WP_059257089.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| PS048_RS23805 (33650) | 33650..34180 | + | 531 | WP_142439655.1 | hypothetical protein | - |
| PS048_RS23810 (34662) | 34662..35987 | + | 1326 | WP_273786684.1 | conjugal transfer pilus assembly protein TraH | - |
| PS048_RS23815 (35984) | 35984..38824 | + | 2841 | WP_059257086.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| PS048_RS23820 (38827) | 38827..39135 | - | 309 | WP_059257085.1 | heavy metal-binding domain-containing protein | - |
| PS048_RS23825 (39349) | 39349..40041 | + | 693 | WP_273786688.1 | hypothetical protein | - |
| PS048_RS23830 (40357) | 40357..42564 | + | 2208 | WP_273786690.1 | type IV conjugative transfer system coupling protein TraD | - |
| PS048_RS23835 (42573) | 42573..42971 | - | 399 | WP_059257082.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PS048_RS23840 (42971) | 42971..43198 | - | 228 | WP_000450526.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PS048_RS23845 (43280) | 43280..48550 | + | 5271 | WP_273786633.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| PS048_RS23850 (48570) | 48570..49310 | + | 741 | WP_059257080.1 | conjugal transfer pilus acetylase TraX | - |
| PS048_RS23855 (49365) | 49365..49925 | + | 561 | WP_059257079.1 | fertility inhibition protein FinO | - |
| PS048_RS23860 (50061) | 50061..50273 | + | 213 | WP_059257078.1 | ANR family transcriptional regulator | - |
| PS048_RS23865 (50519) | 50519..50870 | + | 352 | Protein_56 | thermonuclease family protein | - |
| PS048_RS23870 (50905) | 50905..51114 | + | 210 | WP_059257077.1 | hemolysin expression modulator Hha | - |
| PS048_RS23875 (51319) | 51319..51756 | + | 438 | WP_059257076.1 | hypothetical protein | - |
| - (51851) | 51851..51912 | - | 62 | NuclAT_0 | - | - |
| - (51851) | 51851..51912 | - | 62 | NuclAT_0 | - | - |
| - (51851) | 51851..51912 | - | 62 | NuclAT_0 | - | - |
| - (51851) | 51851..51912 | - | 62 | NuclAT_0 | - | - |
| PS048_RS23880 (51956) | 51956..52126 | + | 171 | WP_072247442.1 | Hok/Gef family protein | Toxin Detail |
| PS048_RS23885 (52693) | 52693..54372 | + | 1680 | WP_077871554.1 | group II intron reverse transcriptase/maturase | - |
| PS048_RS23890 (54786) | 54786..55088 | + | 303 | WP_072146426.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PS048_RS23895 (55079) | 55079..55561 | + | 483 | WP_059257273.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PS048_RS23900 (55872) | 55872..56126 | + | 255 | WP_273786639.1 | replication regulatory protein RepA | - |
| PS048_RS23905 (56362) | 56362..56436 | + | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| PS048_RS23910 (56429) | 56429..57286 | + | 858 | WP_265463468.1 | incFII family plasmid replication initiator RepA | - |
| PS048_RS23915 (58200) | 58200..58469 | + | 270 | WP_059272212.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| PS048_RS23920 (58469) | 58469..58747 | + | 279 | WP_262939943.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| PS048_RS23925 (58793) | 58793..59346 | + | 554 | Protein_68 | 3'-5' exonuclease | - |
| PS048_RS23930 (59632) | 59632..59997 | - | 366 | WP_262933613.1 | hypothetical protein | - |
| PS048_RS23935 (60510) | 60510..61209 | + | 700 | Protein_70 | ISL3 family transposase | - |
| PS048_RS23940 (61259) | 61259..61849 | - | 591 | WP_273785352.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| PS048_RS23945 (62010) | 62010..64994 | + | 2985 | WP_273785354.1 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| PS048_RS23950 (65224) | 65224..65802 | - | 579 | WP_059242411.1 | hypothetical protein | VF |
| PS048_RS23955 (66445) | 66445..68568 | - | 2124 | WP_059242412.1 | peptidase domain-containing ABC transporter | - |
| PS048_RS23960 (68568) | 68568..69788 | - | 1221 | WP_059242415.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| PS048_RS23965 (70399) | 70399..70971 | - | 573 | WP_059242416.1 | hypothetical protein | - |
| PS048_RS23970 (71228) | 71228..71745 | + | 518 | Protein_77 | IS3 family transposase | - |
| PS048_RS23975 (71744) | 71744..72021 | + | 278 | Protein_78 | IS3 family transposase | - |
| PS048_RS23980 (72202) | 72202..73415 | + | 1214 | WP_273784564.1 | IS3 family transposase IS629 | Transposase |
| PS048_RS23985 (73477) | 73477..73893 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| PS048_RS23990 (73886) | 73886..74866 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| PS048_RS23995 (75280) | 75280..75588 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| PS048_RS24000 (75675) | 75675..76319 | - | 645 | WP_001144036.1 | ParA family protein | - |
| PS048_RS24005 (76499) | 76499..77278 | - | 780 | WP_273786695.1 | site-specific integrase | - |
| PS048_RS24010 (77280) | 77280..77693 | - | 414 | WP_000465034.1 | hypothetical protein | - |
| PS048_RS24015 (78248) | 78248..78739 | + | 492 | WP_001090930.1 | hypothetical protein | - |
| PS048_RS24020 (78782) | 78782..79903 | - | 1122 | WP_001012502.1 | DUF3800 domain-containing protein | - |
| PS048_RS24025 (80192) | 80192..80446 | + | 255 | WP_059242592.1 | hypothetical protein | - |
| PS048_RS24030 (80446) | 80446..81036 | + | 591 | WP_273786659.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|