MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 89679 bp
Accession: NZ_CP117592 Location: 1..89679 Organism: Escherichia albertii strain BIA_36 Replicon: plasmid pEA36_2
Accession: NZ_CP117592 Location: 1..89679 Organism: Escherichia albertii strain BIA_36 Replicon: plasmid pEA36_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS051_RS24275 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| PS051_RS24280 (1263) | 1263..2003 | - | 741 | WP_001603634.1 | tyrosine-type recombinase/integrase | - |
| PS051_RS24285 (2369) | 2369..2512 | + | 144 | Protein_2 | transcriptional regulator | - |
| PS051_RS24290 (3082) | 3082..3882 | + | 801 | WP_233929351.1 | AraC family transcriptional regulator | - |
| PS051_RS24295 (3971) | 3971..4066 | + | 96 | Protein_4 | IS66 family insertion sequence element accessory protein TnpB | - |
| PS051_RS24300 (4581) | 4581..4847 | - | 267 | WP_233929350.1 | PerC family transcriptional regulator | - |
| PS051_RS24305 (5232) | 5232..6413 | - | 1182 | WP_273782080.1 | hypothetical protein | - |
| PS051_RS24310 (6455) | 6455..6976 | - | 522 | WP_233929348.1 | hypothetical protein | VF |
| PS051_RS24315 (7044) | 7044..7742 | - | 699 | WP_233929347.1 | fimbria/pilus periplasmic chaperone | - |
| PS051_RS24320 (7733) | 7733..10240 | - | 2508 | WP_233929346.1 | putative outer membrane usher protein ElfC | VF |
| PS051_RS24325 (10269) | 10269..10709 | - | 441 | WP_072251125.1 | fimbria/pilus periplasmic chaperone | - |
| PS051_RS24330 (10690) | 10690..11394 | - | 705 | WP_233929345.1 | molecular chaperone | - |
| PS051_RS24335 (11464) | 11464..12039 | - | 576 | WP_233929344.1 | S-fimbrial protein subunit SfaA | VF |
| PS051_RS24340 (12238) | 12238..12435 | - | 198 | Protein_13 | hypothetical protein | - |
| PS051_RS24345 (12542) | 12542..12724 | + | 183 | Protein_14 | IS21 family transposase ISSso4 | Transposase |
| PS051_RS24350 (12858) | 12858..13655 | - | 798 | WP_273782084.1 | IS21 family transposase IS21 | Transposase |
| PS051_RS24355 (13655) | 13655..14827 | - | 1173 | WP_000952373.1 | IS21 family transposase IS21 | Transposase |
| PS051_RS24360 (14913) | 14913..15615 | + | 703 | Protein_17 | IS3 family transposase ISKpn38 | Transposase |
| PS051_RS24365 (15708) | 15708..16578 | + | 871 | Protein_18 | IS3 family transposase IS2 | Transposase |
| PS051_RS24370 (17182) | 17182..17651 | - | 470 | Protein_19 | heme-binding protein | - |
| PS051_RS24375 (18280) | 18280..18408 | + | 129 | WP_273782085.1 | S6 family peptidase | - |
| PS051_RS24380 (18568) | 18568..18714 | - | 147 | Protein_21 | IS256 family transposase ISSod4 | Transposase |
| PS051_RS24385 (18949) | 18949..19896 | - | 948 | WP_059242586.1 | VirK/YbjX family protein | - |
| PS051_RS24390 (20527) | 20527..21524 | - | 998 | Protein_23 | Lipid A biosynthesis myristoyltransferase | VF |
| PS051_RS24395 (21612) | 21612..22718 | - | 1107 | WP_233929352.1 | glycosyltransferase family 4 protein | - |
| PS051_RS24400 (22718) | 22718..23539 | - | 822 | WP_059242583.1 | polysaccharide deacetylase family protein | - |
| PS051_RS24405 (24131) | 24131..24253 | - | 123 | Protein_26 | transcriptional regulator | - |
| PS051_RS24410 (24323) | 24323..25005 | - | 683 | Protein_27 | IS3 family transposase | - |
| PS051_RS24415 (25416) | 25416..26233 | + | 818 | Protein_28 | transposase | - |
| PS051_RS24420 (26239) | 26239..26760 | + | 522 | Protein_29 | IS481 family transposase ISErsp1 | Transposase |
| PS051_RS24425 (26965) | 26965..28062 | - | 1098 | WP_233929343.1 | glycosyltransferase family 4 protein | - |
| PS051_RS24430 (28530) | 28530..28688 | - | 159 | Protein_31 | ATP-binding protein | - |
| PS051_RS24435 (28875) | 28875..30037 | + | 1163 | WP_273782081.1 | IS3 family transposase ISEc17 | Transposase |
| PS051_RS24440 (30070) | 30070..30323 | - | 254 | Protein_33 | IS3 family transposase ISKpn38 | Transposase |
| PS051_RS24445 (30328) | 30328..30805 | - | 478 | Protein_34 | IS3 family transposase | - |
| PS051_RS24450 (31083) | 31083..31655 | + | 573 | WP_059242416.1 | hypothetical protein | - |
| PS051_RS24455 (32279) | 32279..33511 | + | 1233 | WP_273782082.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| PS051_RS24460 (33511) | 33511..35634 | + | 2124 | WP_273782083.1 | peptidase domain-containing ABC transporter | - |
| PS051_RS24465 (36276) | 36276..36854 | + | 579 | WP_233929339.1 | hypothetical protein | VF |
| PS051_RS24470 (37048) | 37048..38016 | - | 969 | WP_273780737.1 | IS5 family transposase IS903B | Transposase |
| PS051_RS24475 (38049) | 38049..38784 | - | 736 | Protein_40 | ISL3 family transposase | - |
| PS051_RS24480 (38840) | 38840..38967 | + | 128 | Protein_41 | IS3 family transposase IS629 | Transposase |
| PS051_RS24485 (39002) | 39002..41882 | - | 2881 | Protein_42 | Tn3 family transposase | - |
| PS051_RS24490 (41885) | 41885..42436 | - | 552 | Protein_43 | SDR family oxidoreductase | - |
| PS051_RS24495 (42585) | 42585..43478 | + | 894 | WP_233929338.1 | HTH-type transcriptional regulator PgrR | VF |
| PS051_RS24500 (43513) | 43513..44502 | - | 990 | WP_233929337.1 | aldo/keto reductase | - |
| PS051_RS24505 (44529) | 44529..45380 | - | 852 | WP_233929336.1 | aldo/keto reductase | - |
| PS051_RS24510 (45610) | 45610..46633 | - | 1024 | Protein_47 | alpha/beta fold hydrolase | - |
| PS051_RS24515 (46741) | 46741..47325 | - | 585 | WP_233929421.1 | flavodoxin | - |
| PS051_RS24520 (47335) | 47335..48096 | - | 762 | WP_273782071.1 | carboxymuconolactone decarboxylase family protein | - |
| PS051_RS24525 (48108) | 48108..48549 | + | 442 | Protein_50 | IS3 family transposase | - |
| PS051_RS24530 (48651) | 48651..48752 | - | 102 | Protein_51 | XRE family transcriptional regulator | - |
| PS051_RS24535 (49073) | 49073..50012 | + | 940 | Protein_52 | IS110 family transposase IS1663 | Transposase |
| PS051_RS24540 (51002) | 51002..51859 | - | 858 | WP_273782072.1 | incFII family plasmid replication initiator RepA | - |
| PS051_RS24545 (51852) | 51852..52334 | - | 483 | WP_001523473.1 | hypothetical protein | - |
| PS051_RS24550 (52327) | 52327..52401 | - | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| PS051_RS24555 (52634) | 52634..52891 | - | 258 | WP_273782073.1 | replication regulatory protein RepA | - |
| PS051_RS24560 (53175) | 53175..53324 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (53368) | 53368..53429 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (53368) | 53368..53429 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (53368) | 53368..53429 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (53368) | 53368..53429 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| PS051_RS24565 (54015) | 54015..54227 | - | 213 | WP_233929316.1 | hypothetical protein | - |
| PS051_RS24570 (54367) | 54367..54927 | - | 561 | WP_233929315.1 | fertility inhibition protein FinO | - |
| PS051_RS24575 (54982) | 54982..55728 | - | 747 | WP_273782074.1 | conjugal transfer pilus acetylase TraX | - |
| PS051_RS24580 (55748) | 55748..61019 | - | 5272 | Protein_61 | Multifunctional conjugation protein TraI | Relaxase |
| PS051_RS24585 (61101) | 61101..61328 | + | 228 | WP_021541611.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PS051_RS24590 (61328) | 61328..61726 | + | 399 | WP_000911317.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PS051_RS24595 (61735) | 61735..62586 | - | 852 | Protein_64 | type IV secretion system DNA-binding domain-containing protein | - |
| PS051_RS24600 (62581) | 62581..62703 | - | 123 | Protein_65 | hypothetical protein | - |
| PS051_RS24605 (63279) | 63279..63416 | - | 138 | Protein_66 | hypothetical protein | - |
| PS051_RS24610 (63837) | 63837..64085 | + | 249 | WP_032084478.1 | DinI-like family protein | - |
| PS051_RS24615 (64133) | 64133..64519 | + | 387 | WP_001462441.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PS051_RS24620 (64519) | 64519..65793 | + | 1275 | WP_233929288.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| PS051_RS24625 (65795) | 65795..66211 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| PS051_RS24630 (66204) | 66204..67184 | - | 981 | WP_000688509.1 | plasmid segregation protein ParM | - |
| PS051_RS24635 (67591) | 67591..67899 | - | 309 | WP_000030204.1 | molecular chaperone GroEL | - |
| PS051_RS24640 (67986) | 67986..68630 | - | 645 | WP_001144036.1 | ParA family protein | - |
| PS051_RS24645 (68809) | 68809..69617 | - | 809 | Protein_74 | site-specific integrase | - |
| PS051_RS24650 (69618) | 69618..69923 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| PS051_RS24655 (69925) | 69925..70143 | - | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| PS051_RS24660 (70739) | 70739..70989 | + | 251 | Protein_77 | hypothetical protein | - |
| PS051_RS24665 (70986) | 70986..71576 | + | 591 | WP_233929287.1 | hypothetical protein | - |
| PS051_RS24670 (72104) | 72104..72550 | - | 447 | WP_096959008.1 | YhbP family protein | - |
| PS051_RS24675 (72682) | 72682..73625 | - | 944 | Protein_80 | LysR family transcriptional regulator | - |
| PS051_RS24680 (73791) | 73791..75263 | + | 1473 | WP_233929286.1 | UbiD family decarboxylase | - |
| PS051_RS24685 (75274) | 75274..75807 | + | 534 | WP_273782075.1 | UbiX family flavin prenyltransferase | - |
| PS051_RS24690 (75830) | 75830..76528 | + | 699 | WP_273782076.1 | DUF554 domain-containing protein | - |
| PS051_RS24695 (76622) | 76622..77167 | + | 546 | WP_273782086.1 | isopentenyl-diphosphate Delta-isomerase | - |
| PS051_RS24700 (77334) | 77334..79088 | + | 1755 | WP_273782077.1 | tannase/feruloyl esterase family alpha/beta hydrolase | - |
| PS051_RS24705 (80137) | 80137..80439 | + | 303 | WP_233929319.1 | hypothetical protein | - |
| PS051_RS24710 (80653) | 80653..80931 | - | 279 | WP_265099691.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| PS051_RS24715 (80931) | 80931..81200 | - | 270 | WP_000079943.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| PS051_RS24720 (81482) | 81482..82162 | - | 681 | WP_233929282.1 | nitroreductase | - |
| PS051_RS24725 (82422) | 82422..83471 | - | 1050 | WP_273782078.1 | alpha/beta hydrolase | - |
| PS051_RS24730 (83722) | 83722..84888 | + | 1167 | WP_233929281.1 | aldo/keto reductase | - |
| PS051_RS24735 (84903) | 84903..85583 | + | 681 | WP_233929280.1 | Transcriptional activator protein CzcR | VF |
| PS051_RS24740 (85599) | 85599..87056 | + | 1458 | WP_273782079.1 | heavy metal sensor histidine kinase | - |
| PS051_RS24745 (87120) | 87120..87599 | + | 480 | WP_233929278.1 | cupin domain-containing protein | - |
| PS051_RS24750 (87577) | 87577..88338 | + | 762 | WP_273782071.1 | carboxymuconolactone decarboxylase family protein | - |
| PS051_RS24755 (88348) | 88348..88932 | + | 585 | WP_233929421.1 | flavodoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|