MGE detailed information
MGE type: Prophage MGE length: 8652 bp
Accession: NZ_CP117400 Location: 314330..322981 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM014 Replicon: chromosome
Accession: NZ_CP117400 Location: 314330..322981 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM014 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP96_RS01410 (310135) | 310135..311238 | + | 1104 | WP_001521443.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| PQP96_RS01415 (311321) | 311321..311455 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| PQP96_RS01420 (311433) | 311433..311816 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| PQP96_RS01425 (312238) | 312238..313347 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| PQP96_RS01430 (313407) | 313407..314333 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| PQP96_RS01435 (314330) | 314330..315607 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| PQP96_RS01440 (315604) | 315604..316371 | + | 768 | WP_000082083.1 | Ammonium transporter | VF |
| PQP96_RS01445 (316373) | 316373..317086 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| PQP96_RS01450 (317218) | 317218..317439 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PQP96_RS01455 (317436) | 317436..317804 | + | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| PQP96_RS01460 (318063) | 318063..319379 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| PQP96_RS01465 (319443) | 319443..320330 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| PQP96_RS01470 (320327) | 320327..321172 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| PQP96_RS01475 (321174) | 321174..322244 | + | 1071 | WP_000907838.1 | Outer-membrane lipoprotein carrier protein | VF |
| PQP96_RS01480 (322241) | 322241..322981 | + | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| PQP96_RS01485 (322994) | 322994..323410 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| PQP96_RS01490 (323536) | 323536..325278 | + | 1743 | WP_000805096.1 | gamma-glutamyltransferase | - |
| PQP96_RS01495 (325323) | 325323..326357 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| PQP96_RS01500 (326354) | 326354..327325 | - | 972 | WP_001038948.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0 |