MGE detailed information
MGE type: Prophage MGE length: 8692 bp
Accession: NZ_CP117380 Location: 309629..318320 Organism: Salmonella enterica subsp. enterica serovar Newport strain RM037 Replicon: chromosome
Accession: NZ_CP117380 Location: 309629..318320 Organism: Salmonella enterica subsp. enterica serovar Newport strain RM037 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP93_RS01385 (305433) | 305433..306536 | + | 1104 | WP_274890204.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| PQP93_RS01390 (306620) | 306620..306754 | - | 135 | WP_012219321.1 | hypothetical protein | - |
| PQP93_RS01395 (306732) | 306732..307115 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| PQP93_RS01400 (307537) | 307537..308646 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| PQP93_RS01405 (308706) | 308706..309632 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| PQP93_RS01410 (309629) | 309629..310906 | + | 1278 | WP_274890205.1 | branched chain amino acid ABC transporter permease LivM | - |
| PQP93_RS01415 (310903) | 310903..311670 | + | 768 | WP_274890206.1 | Fructose-bisphosphate aldolase class 2 | VF |
| PQP93_RS01420 (311672) | 311672..312385 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| PQP93_RS01425 (312517) | 312517..312738 | + | 222 | WP_001535398.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PQP93_RS01430 (312735) | 312735..313103 | + | 369 | WP_000174966.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| PQP93_RS01435 (313362) | 313362..314676 | + | 1315 | Protein_282 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| PQP93_RS01440 (314781) | 314781..315668 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| PQP93_RS01445 (315665) | 315665..316510 | + | 846 | WP_274890207.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| PQP93_RS01450 (316513) | 316513..317583 | + | 1071 | WP_000907845.1 | S-adenosylmethionine synthase | VF |
| PQP93_RS01455 (317580) | 317580..318320 | + | 741 | WP_000073547.1 | glycerophosphodiester phosphodiesterase | - |
| PQP93_RS01460 (318333) | 318333..318749 | - | 417 | WP_000826046.1 | DUF2756 family protein | - |
| PQP93_RS01465 (318875) | 318875..320617 | + | 1743 | WP_000805094.1 | gamma-glutamyltransferase | - |
| PQP93_RS01470 (320662) | 320662..321696 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| PQP93_RS01475 (321693) | 321693..322664 | - | 972 | WP_274890208.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.009 |