MGE detailed information
MGE type: IS/Tn MGE length: 279 bp
Accession: NZ_CP117367 Location: 3852221..3852499 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM079 Replicon: chromosome
Accession: NZ_CP117367 Location: 3852221..3852499 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM079 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ12_RS19120 () | 3847606..3850116 | - | 2511 | WP_000669624.1 | fimbrial biogenesis outer membrane usher protein | - |
| PQQ12_RS19125 () | 3850140..3850876 | - | 737 | Protein_3749 | pili assembly chaperone SafB | - |
| PQQ12_RS19130 () | 3850960..3851412 | - | 453 | WP_001675682.1 | Saf-pilin pilus formation protein SafA | - |
| PQQ12_RS19135 () | 3852221..3852791 | - | 571 | Protein_3751 | integrase core domain-containing protein | - |
| PQQ12_RS19140 () | 3852712..3852921 | - | 210 | WP_001676010.1 | hypothetical protein | - |
| PQQ12_RS19145 () | 3852974..3853288 | + | 315 | WP_072100769.1 | SymE family type I addiction module toxin | - |
| PQQ12_RS19150 () | 3853355..3853633 | - | 279 | WP_012543321.1 | hypothetical protein | - |
| PQQ12_RS19155 () | 3853949..3854416 | - | 468 | WP_000828183.1 | sugar tyrosine-protein kinase | - |
| PQQ12_RS19160 () | 3854413..3854730 | - | 318 | WP_001751277.1 | hypothetical protein | - |
| PQQ12_RS19165 () | 3855288..3855521 | - | 234 | WP_124084119.1 | hypothetical protein | - |
| - | 3855699..3856031 | - | 333 | - | - | Antitoxin Detail |
| PQQ12_RS19170 () | 3855856..3856113 | + | 258 | WP_000994230.1 | SymE family type I addiction module toxin | Toxin Detail |
| PQQ12_RS19175 () | 3856179..3856625 | - | 447 | WP_000171102.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | IS/Tn | TA10105 | NC_003197 | 341179..341460 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | IS/Tn | TA10103 | NC_016810 | 340656..340937 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | IS/Tn | TA26042 | NC_016856 | 341863..342144 | 0.009 |