MGE detailed information
MGE type: IS/Tn MGE length: 177 bp
Accession: NZ_CP117357 Location: 1025190..1025366 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM096 Replicon: chromosome
Accession: NZ_CP117357 Location: 1025190..1025366 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM096 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ15_RS04960 (1020303) | 1020303..1020683 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| PQQ15_RS04965 (1020739) | 1020739..1023306 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| PQQ15_RS04970 (1023465) | 1023465..1023986 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| PQQ15_RS04975 (1024158) | 1024158..1024814 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| PQQ15_RS04980 (1025161) | 1025161..1025366 | + | 206 | Protein_976 | IS5 family transposase ISEcl3 | Transposase |
| PQQ15_RS04985 (1025439) | 1025439..1025966 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PQQ15_RS04990 (1025963) | 1025963..1026253 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PQQ15_RS04995 (1026523) | 1026523..1026701 | - | 179 | Protein_979 | IS3 family transposase | - |
| PQQ15_RS05000 (1026942) | 1026942..1027268 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| PQQ15_RS05005 (1027541) | 1027541..1027888 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| PQQ15_RS05010 (1027873) | 1027873..1028322 | - | 450 | WP_000381610.1 | membrane protein | - |
| PQQ15_RS05015 (1028753) | 1028753..1029196 | - | 444 | WP_000715092.1 | SPI-1 type III secretion system invasion lipoprotein InvH | - |
| PQQ15_RS05020 (1029653) | 1029653..1030303 | + | 651 | WP_001674874.1 | type III secretion system transcriptional activator InvF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | IS/Tn | TA25955 | NC_016810 | 3070795..3070971 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | IS/Tn | TA26055 | NC_016856 | 3068456..3068632 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | IS/Tn | TA10052 | UFRD01000002 | 4599654..4599830 | 0 |