MGE detailed information
MGE type: Prophage MGE length: 38324 bp
Accession: NZ_CP117348 Location: 2053842..2092165 Organism: Salmonella enterica subsp. enterica serovar Heidelberg strain RM101 Replicon: chromosome
Accession: NZ_CP117348 Location: 2053842..2092165 Organism: Salmonella enterica subsp. enterica serovar Heidelberg strain RM101 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ11_RS09885 () | 2050115..2050756 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| PQQ11_RS09890 () | 2050856..2052034 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| PQQ11_RS09895 () | 2052165..2052455 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| PQQ11_RS09900 () | 2052523..2052876 | + | 354 | WP_001042123.1 | protein YebF | - |
| PQQ11_RS09905 () | 2052970..2053629 | + | 660 | WP_000024707.1 | tellurite resistance TerB family protein | - |
| PQQ11_RS09910 () | 2053842..2055893 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| PQQ11_RS09915 () | 2055928..2056626 | - | 699 | WP_000944284.1 | exodeoxyribonuclease X | - |
| PQQ11_RS09920 () | 2056650..2057306 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| PQQ11_RS09925 () | 2057414..2057644 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| PQQ11_RS09930 () | 2057782..2058156 | + | 375 | WP_000168394.1 | CopC domain-containing protein YobA | - |
| PQQ11_RS09935 () | 2058157..2059032 | + | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| PQQ11_RS09940 () | 2059049..2059402 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2059504..2059647 | - | 144 | - | - | Antitoxin Detail |
| - | 2059542..2059645 | + | 104 | - | - | Toxin Detail |
| PQQ11_RS09945 () | 2059776..2060699 | - | 924 | Protein_1944 | hypothetical protein ; Integrase | Integrase |
| PQQ11_RS09950 () | 2060963..2061424 | - | 462 | Protein_1945 | DNA breaking-rejoining protein | - |
| PQQ11_RS09955 () | 2061413..2061604 | + | 192 | Protein_1946 | glycoside hydrolase family 19 protein | - |
| PQQ11_RS09960 () | 2061658..2062191 | + | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| PQQ11_RS09965 () | 2062448..2062615 | - | 168 | WP_000789529.1 | lytic enzyme | - |
| PQQ11_RS09970 () | 2062923..2063183 | + | 261 | Protein_1949 | DUF1441 family protein | - |
| PQQ11_RS09975 () | 2063185..2063400 | + | 216 | Protein_1950 | shikimate transporter | - |
| PQQ11_RS09980 () | 2063410..2063697 | + | 288 | Protein_1951 | macro domain-containing protein | - |
| PQQ11_RS09985 () | 2063710..2064221 | + | 512 | Protein_1952 | tail fiber assembly protein | - |
| PQQ11_RS09990 () | 2064318..2064518 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| PQQ11_RS09995 () | 2064908..2065088 | - | 181 | Protein_1954 | IS3 family transposase | - |
| PQQ11_RS10000 () | 2065088..2065213 | + | 126 | WP_000457876.1 | hypothetical protein | - |
| PQQ11_RS10005 () | 2065887..2066033 | + | 147 | Protein_1956 | helix-turn-helix domain-containing protein | - |
| PQQ11_RS10010 () | 2066360..2066974 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| PQQ11_RS10015 () | 2066984..2067142 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| PQQ11_RS10020 () | 2067275..2068189 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| PQQ11_RS10025 () | 2069510..2069932 | - | 423 | Protein_1960 | hypothetical protein ; Integrase | Integrase |
| PQQ11_RS10030 () | 2070002..2071196 | + | 1195 | Protein_1961 | IS256 family transposase IS285 | Transposase |
| PQQ11_RS10035 () | 2071342..2071482 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| PQQ11_RS10040 () | 2071648..2071917 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| PQQ11_RS10045 () | 2072287..2072706 | + | 420 | WP_000354407.1 | GNAT family N-acetyltransferase | - |
| PQQ11_RS10050 () | 2073093..2073569 | - | 477 | WP_000030935.1 | hypothetical protein | - |
| PQQ11_RS10055 () | 2073899..2074294 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| PQQ11_RS10060 () | 2074978..2075700 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| PQQ11_RS10065 () | 2075985..2076149 | + | 165 | WP_001134856.1 | membrane protein | - |
| PQQ11_RS10070 () | 2076373..2077023 | + | 651 | WP_000986357.1 | protein-serine/threonine phosphatase | - |
| PQQ11_RS10075 () | 2077042..2077233 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| PQQ11_RS10080 () | 2077344..2077580 | - | 237 | WP_024131108.1 | YebV family protein | - |
| PQQ11_RS10085 () | 2077698..2079137 | - | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| PQQ11_RS10090 () | 2079215..2081848 | - | 2634 | WP_001521100.1 | Intermembrane transport protein YebT | VF |
| PQQ11_RS10095 () | 2081817..2083100 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| PQQ11_RS10100 () | 2083229..2083726 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| PQQ11_RS10105 () | 2083824..2084510 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| PQQ11_RS10110 () | 2084530..2086578 | + | 2049 | WP_001091234.1 | carboxy terminal-processing peptidase | - |
| PQQ11_RS10115 () | 2086772..2087653 | + | 882 | WP_000984498.1 | protease HtpX | - |
| PQQ11_RS10120 () | 2087701..2089074 | - | 1374 | WP_000416131.1 | MFS transporter | - |
| PQQ11_RS10125 () | 2089250..2090041 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| PQQ11_RS10130 () | 2090253..2090492 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| PQQ11_RS10135 () | 2090650..2090793 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| PQQ11_RS10140 () | 2090864..2091151 | + | 288 | WP_001000660.1 | YebO family protein | - |
| PQQ11_RS10145 () | 2091800..2091943 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| PQQ11_RS10150 () | 2091956..2092165 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| PQQ11_RS10155 () | 2092385..2094130 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| PQQ11_RS10160 () | 2094196..2095005 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| PQQ11_RS10165 () | 2095002..2095568 | - | 567 | WP_001531552.1 | manganese efflux pump MntP | - |
| PQQ11_RS10170 () | 2095978..2096436 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0.003 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0.003 |