MGE detailed information
MGE type: Prophage MGE length: 7378 bp
Accession: NZ_CP117338 Location: 314889..322266 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM095 Replicon: chromosome
Accession: NZ_CP117338 Location: 314889..322266 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM095 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP94_RS01410 (310606) | 310606..310740 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| PQP94_RS01415 (310718) | 310718..311101 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| PQP94_RS01420 (311523) | 311523..312632 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| PQP94_RS01425 (312692) | 312692..313618 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| PQP94_RS01430 (313615) | 313615..314892 | + | 1278 | WP_001742325.1 | branched chain amino acid ABC transporter permease LivM | - |
| PQP94_RS01435 (314889) | 314889..315656 | + | 768 | WP_274895818.1 | PTS system mannose-specific EIIBCA component | VF |
| PQP94_RS01440 (315658) | 315658..316371 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| PQP94_RS01445 (316503) | 316503..316724 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PQP94_RS01450 (316721) | 316721..317089 | + | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| PQP94_RS01455 (317348) | 317348..318664 | + | 1317 | WP_274895819.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| PQP94_RS01460 (318728) | 318728..319615 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| PQP94_RS01465 (319612) | 319612..320457 | + | 846 | WP_274895820.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| PQP94_RS01470 (320459) | 320459..321529 | + | 1071 | WP_000907838.1 | PTS system sorbose-specific EIIC component | VF |
| PQP94_RS01475 (321526) | 321526..322266 | + | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| PQP94_RS01480 (322279) | 322279..322695 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| PQP94_RS01485 (322821) | 322821..324563 | + | 1743 | WP_000805096.1 | gamma-glutamyltransferase | - |
| PQP94_RS01490 (324608) | 324608..325642 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| PQP94_RS01495 (325639) | 325639..326611 | - | 973 | Protein_295 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.004 |