MGE detailed information
MGE type: Prophage MGE length: 38325 bp
Accession: NZ_CP117327 Location: 1983271..2021595 Organism: Salmonella enterica subsp. enterica serovar Saintpaul strain RM106 Replicon: chromosome
Accession: NZ_CP117327 Location: 1983271..2021595 Organism: Salmonella enterica subsp. enterica serovar Saintpaul strain RM106 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP95_RS09435 () | 1979544..1980185 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| PQP95_RS09440 () | 1980285..1981463 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| PQP95_RS09445 () | 1981594..1981884 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| PQP95_RS09450 () | 1981952..1982305 | + | 354 | WP_001042119.1 | protein YebF | - |
| PQP95_RS09455 () | 1982399..1983058 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| PQP95_RS09460 () | 1983271..1985322 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| PQP95_RS09465 () | 1985357..1986055 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| PQP95_RS09470 () | 1986079..1986735 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| PQP95_RS09475 () | 1986843..1987073 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| PQP95_RS09480 () | 1987211..1987585 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| PQP95_RS09485 () | 1987586..1988461 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| PQP95_RS09490 () | 1988478..1988831 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 1988931..1989076 | - | 146 | - | - | Antitoxin Detail |
| - | 1988971..1989074 | + | 104 | - | - | Toxin Detail |
| PQP95_RS09495 () | 1989205..1990128 | - | 924 | Protein_1853 | hypothetical protein ; Integrase | Integrase |
| PQP95_RS09500 () | 1990392..1990853 | - | 462 | Protein_1854 | DNA breaking-rejoining protein | - |
| PQP95_RS09505 () | 1990842..1991033 | + | 192 | Protein_1855 | glycoside hydrolase family 19 protein | - |
| PQP95_RS09510 () | 1991087..1991620 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| PQP95_RS09515 () | 1991877..1992044 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| PQP95_RS09520 () | 1992109..1992297 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| PQP95_RS09525 () | 1992352..1992612 | + | 261 | Protein_1859 | DUF1441 family protein | - |
| PQP95_RS09530 () | 1992614..1992829 | + | 216 | Protein_1860 | shikimate transporter | - |
| PQP95_RS09535 () | 1992827..1993171 | + | 345 | Protein_1861 | macro domain-containing protein | - |
| PQP95_RS09540 () | 1993181..1993651 | + | 471 | Protein_1862 | tail fiber assembly protein | - |
| PQP95_RS09545 () | 1993748..1993948 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| PQP95_RS09550 () | 1994338..1994518 | - | 181 | Protein_1864 | IS3 family transposase | - |
| PQP95_RS09555 () | 1994518..1994643 | + | 126 | WP_000457876.1 | hypothetical protein | - |
| PQP95_RS09560 () | 1995157..1995303 | - | 147 | WP_001520350.1 | hypothetical protein | - |
| PQP95_RS09565 () | 1995297..1995464 | + | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| PQP95_RS09570 () | 1995791..1996405 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| PQP95_RS09575 () | 1996415..1996573 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| PQP95_RS09580 () | 1996706..1997620 | - | 915 | WP_001233445.1 | DMT family transporter | - |
| PQP95_RS09585 () | 1998923..1999345 | - | 423 | Protein_1871 | hypothetical protein ; Integrase | Integrase |
| PQP95_RS09590 () | 1999415..2000623 | + | 1209 | WP_000343625.1 | IS256 family transposase ISEc39 | Transposase |
| PQP95_RS09595 () | 2000769..2000909 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| PQP95_RS09600 () | 2001075..2001344 | - | 270 | WP_012664556.1 | hypothetical protein | - |
| PQP95_RS09605 () | 2001717..2002136 | + | 420 | WP_000354407.1 | GNAT family N-acetyltransferase | - |
| PQP95_RS09610 () | 2002524..2003000 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| PQP95_RS09615 () | 2003329..2003724 | - | 396 | WP_000422880.1 | DUF1398 domain-containing protein | - |
| PQP95_RS09620 () | 2004408..2005130 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| PQP95_RS09625 () | 2005415..2005579 | + | 165 | WP_001134856.1 | membrane protein | - |
| PQP95_RS09630 () | 2005803..2006453 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| PQP95_RS09635 () | 2006472..2006663 | - | 192 | WP_000457836.1 | YebW family protein | - |
| PQP95_RS09640 () | 2006774..2007010 | - | 237 | WP_024131108.1 | YebV family protein | - |
| PQP95_RS09645 () | 2007128..2008567 | - | 1440 | WP_023181135.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| PQP95_RS09650 () | 2008645..2011278 | - | 2634 | WP_001521100.1 | hypothetical protein | VF |
| PQP95_RS09655 () | 2011247..2012530 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| PQP95_RS09660 () | 2012659..2013156 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| PQP95_RS09665 () | 2013254..2013940 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| PQP95_RS09670 () | 2013960..2016008 | + | 2049 | WP_274891399.1 | carboxy terminal-processing peptidase | - |
| PQP95_RS09675 () | 2016202..2017083 | + | 882 | WP_000984498.1 | protease HtpX | - |
| PQP95_RS09680 () | 2017131..2018504 | - | 1374 | WP_000416128.1 | MFS transporter | - |
| PQP95_RS09685 () | 2018680..2019471 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| PQP95_RS09690 () | 2019683..2019922 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| PQP95_RS09695 () | 2020080..2020223 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| PQP95_RS09700 () | 2020294..2020581 | + | 288 | WP_001000660.1 | YebO family protein | - |
| PQP95_RS09705 () | 2021230..2021373 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| PQP95_RS09710 () | 2021386..2021595 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| PQP95_RS09715 () | 2021815..2023560 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| PQP95_RS09720 () | 2023626..2024435 | + | 810 | WP_000010930.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| PQP95_RS09725 () | 2024432..2024998 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| PQP95_RS09730 () | 2025408..2025866 | - | 459 | WP_000156274.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.01 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0.004 |