MGE detailed information
MGE type: Genomic_island MGE length: 11326 bp
Accession: NZ_CP117033 Location: 879368..890693 Organism: Salmonella enterica strain PIW95_S14_0299 Replicon: chromosome
Accession: NZ_CP117033 Location: 879368..890693 Organism: Salmonella enterica strain PIW95_S14_0299 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP07_RS04260 (874814) | 874814..875912 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| PQP07_RS04265 (875922) | 875922..877439 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| PQP07_RS04270 (877515) | 877515..878060 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| PQP07_RS04275 (878325) | 878325..879083 | + | 759 | WP_000244329.1 | amidase activator ActS | - |
| PQP07_RS04285 (879368) | 879368..880174 | - | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| PQP07_RS04290 (880449) | 880449..880700 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| PQP07_RS04295 (880877) | 880877..881104 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PQP07_RS04300 (881104) | 881104..881502 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PQP07_RS04305 (882308) | 882308..882844 | + | 537 | WP_001038506.1 | Attachment invasion locus protein | VF |
| PQP07_RS04310 (882891) | 882891..883523 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| PQP07_RS04315 (884242) | 884242..884826 | + | 585 | WP_001244638.1 | putative fimbrial-like protein YbgD | VF |
| PQP07_RS04320 (884946) | 884946..887435 | + | 2490 | WP_000705483.1 | Outer membrane usher protein PapC | VF |
| PQP07_RS04325 (887476) | 887476..888219 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| PQP07_RS04330 (888216) | 888216..889292 | + | 1077 | WP_000141329.1 | outer membrane protein | - |
| PQP07_RS04335 (889436) | 889436..889948 | + | 513 | WP_000336259.1 | CaiF/GrlA family transcriptional regulator | - |
| PQP07_RS04340 (889935) | 889935..890693 | + | 759 | WP_000134791.1 | transcriptional regulator | - |
| PQP07_RS04345 (890903) | 890903..891739 | - | 837 | WP_000503692.1 | nickel/cobalt efflux protein RcnA | - |
| PQP07_RS04350 (891861) | 891861..892133 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| PQP07_RS04355 (892164) | 892164..893393 | - | 1230 | WP_000036825.1 | amino acid permease | - |
| PQP07_RS04360 (893535) | 893535..893990 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| PQP07_RS04365 (894094) | 894094..894957 | + | 864 | WP_001270766.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Genomic island | TA439 | NC_003197 | 3186004..3197296 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0 |