MGE detailed information
MGE type: Genomic_island MGE length: 15961 bp
Accession: NZ_CP117001 Location: 4083934..4099894 Organism: Escherichia coli strain MLI108K2 Replicon: chromosome
Accession: NZ_CP117001 Location: 4083934..4099894 Organism: Escherichia coli strain MLI108K2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL410_RS21750 (4083111) | 4083111..4083503 | + | 393 | WP_001101839.1 | hypothetical protein | - |
| NL410_RS21755 (4083934) | 4083934..4085070 | + | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| NL410_RS21760 (4085111) | 4085111..4085881 | - | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| NL410_RS21765 (4086062) | 4086062..4086508 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| NL410_RS21770 (4086551) | 4086551..4088995 | - | 2445 | WP_255065764.1 | Acyl-coenzyme A dehydrogenase | VF |
| NL410_RS21775 (4089235) | 4089235..4089813 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| NL410_RS21780 (4090019) | 4090019..4090786 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| NL410_RS21785 (4090757) | 4090757..4091497 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| NL410_RS21790 (4091653) | 4091653..4091931 | - | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| NL410_RS21795 (4091934) | 4091934..4092194 | - | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| NL410_RS21800 (4092404) | 4092404..4093153 | + | 750 | WP_000056849.1 | hypothetical protein | VF |
| NL410_RS21805 (4093329) | 4093329..4093826 | + | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| NL410_RS21810 (4094050) | 4094050..4095762 | - | 1713 | Protein_3909 | Flagellar biosynthesis protein FlhA | VF |
| NL410_RS21815 (4095734) | 4095734..4096519 | + | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| NL410_RS21820 (4096590) | 4096590..4097645 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| NL410_RS21825 (4097697) | 4097697..4097990 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| NL410_RS21830 (4097993) | 4097993..4098391 | + | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| NL410_RS21835 (4098401) | 4098401..4098853 | + | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| NL410_RS21840 (4099171) | 4099171..4099377 | + | 207 | Protein_3915 | RtcB family protein | - |
| NL410_RS21845 (4099373) | 4099373..4099894 | + | 522 | Protein_3916 | peptide chain release factor H | - |
| NL410_RS21850 (4099951) | 4099951..4101408 | - | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| NL410_RS21855 (4101669) | 4101669..4102127 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (4102723) | 4102723..4102803 | + | 81 | NuclAT_11 | - | - |
| - (4102723) | 4102723..4102803 | + | 81 | NuclAT_11 | - | - |
| - (4102723) | 4102723..4102803 | + | 81 | NuclAT_11 | - | - |
| - (4102723) | 4102723..4102803 | + | 81 | NuclAT_11 | - | - |
| NL410_RS21860 (4102219) | 4102219..4103463 | + | 1245 | WP_000189532.1 | esterase FrsA | - |
| NL410_RS21865 (4103521) | 4103521..4103922 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA28996, TA28997 | NC_020518 | 223678..243064 | 0.008 |