MGE detailed information
MGE type: Genomic_island MGE length: 15961 bp
Accession: NZ_CP116994 Location: 4083298..4099258 Organism: Escherichia coli strain MLI108K1 Replicon: chromosome
Accession: NZ_CP116994 Location: 4083298..4099258 Organism: Escherichia coli strain MLI108K1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL409_RS21735 (4082475) | 4082475..4082867 | + | 393 | WP_001101839.1 | hypothetical protein | - |
| NL409_RS21740 (4083298) | 4083298..4084434 | + | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| NL409_RS21745 (4084475) | 4084475..4085245 | - | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| NL409_RS21750 (4085426) | 4085426..4085872 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| NL409_RS21755 (4085915) | 4085915..4088359 | - | 2445 | WP_255065764.1 | Acyl-coenzyme A dehydrogenase | VF |
| NL409_RS21760 (4088599) | 4088599..4089177 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| NL409_RS21765 (4089383) | 4089383..4090150 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| NL409_RS21770 (4090121) | 4090121..4090861 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| NL409_RS21775 (4091017) | 4091017..4091295 | - | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| NL409_RS21780 (4091298) | 4091298..4091558 | - | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| NL409_RS21785 (4091768) | 4091768..4092517 | + | 750 | WP_000056849.1 | hypothetical protein | VF |
| NL409_RS21790 (4092693) | 4092693..4093190 | + | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| NL409_RS21795 (4093414) | 4093414..4095126 | - | 1713 | Protein_3906 | Flagellar biosynthesis protein FlhA | VF |
| NL409_RS21800 (4095098) | 4095098..4095883 | + | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| NL409_RS21805 (4095954) | 4095954..4097009 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| NL409_RS21810 (4097061) | 4097061..4097354 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| NL409_RS21815 (4097357) | 4097357..4097755 | + | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| NL409_RS21820 (4097765) | 4097765..4098217 | + | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| NL409_RS21825 (4098535) | 4098535..4098741 | + | 207 | Protein_3912 | RtcB family protein | - |
| NL409_RS21830 (4098737) | 4098737..4099258 | + | 522 | Protein_3913 | peptide chain release factor H | - |
| NL409_RS21835 (4099315) | 4099315..4100772 | - | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| NL409_RS21840 (4101033) | 4101033..4101491 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (4102087) | 4102087..4102167 | + | 81 | NuclAT_11 | - | - |
| - (4102087) | 4102087..4102167 | + | 81 | NuclAT_11 | - | - |
| - (4102087) | 4102087..4102167 | + | 81 | NuclAT_11 | - | - |
| - (4102087) | 4102087..4102167 | + | 81 | NuclAT_11 | - | - |
| NL409_RS21845 (4101583) | 4101583..4102827 | + | 1245 | WP_000189532.1 | esterase FrsA | - |
| NL409_RS21850 (4102885) | 4102885..4103286 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA28996, TA28997 | NC_020518 | 223678..243064 | 0.008 |