MGE detailed information
MGE type: Genomic_island MGE length: 37006 bp
Accession: NZ_CP114893 Location: 2323387..2360392 Organism: Escherichia coli strain CM13 Replicon: chromosome
Accession: NZ_CP114893 Location: 2323387..2360392 Organism: Escherichia coli strain CM13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O6R07_RS11335 (2319571) | 2319571..2320839 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| O6R07_RS11340 (2320859) | 2320859..2321836 | - | 978 | WP_000993126.1 | glutarate dioxygenase GlaH | - |
| O6R07_RS11345 (2322172) | 2322172..2324424 | - | 2253 | Protein_2199 | alpha-amylase family glycosyl hydrolase | - |
| O6R07_RS11355 (2325188) | 2325188..2325295 | - | 108 | Protein_2200 | DUF1382 family protein | - |
| O6R07_RS11360 (2325268) | 2325268..2325452 | - | 185 | Protein_2201 | DUF1317 domain-containing protein | - |
| O6R07_RS11365 (2326403) | 2326403..2326978 | + | 576 | WP_203217103.1 | restriction endonuclease subunit S | - |
| O6R07_RS11370 (2326979) | 2326979..2328535 | + | 1557 | WP_203217104.1 | type I restriction-modification system subunit M | - |
| O6R07_RS11375 (2328528) | 2328528..2329712 | + | 1185 | WP_203217105.1 | restriction endonuclease subunit S | - |
| O6R07_RS11380 (2330935) | 2330935..2332308 | + | 1374 | Protein_2205 | DUF5507 domain-containing protein | - |
| O6R07_RS11385 (2332663) | 2332663..2332881 | + | 219 | WP_071524906.1 | recombinase family protein | - |
| O6R07_RS11390 (2333036) | 2333036..2333155 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| O6R07_RS11395 (2333220) | 2333220..2337800 | + | 4581 | WP_010723187.1 | putative autotransporter | VF |
| O6R07_RS11400 (2338164) | 2338164..2338493 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| O6R07_RS11405 (2338514) | 2338514..2338831 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| O6R07_RS11410 (2338869) | 2338869..2339069 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| O6R07_RS11415 (2339078) | 2339078..2339560 | - | 483 | WP_001407480.1 | RadC family protein | - |
| O6R07_RS11420 (2339569) | 2339569..2340027 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| O6R07_RS11425 (2340130) | 2340130..2340353 | - | 224 | Protein_2214 | DUF905 family protein | - |
| O6R07_RS11430 (2340925) | 2340925..2342628 | - | 1704 | WP_000896263.1 | protein YfjW | - |
| O6R07_RS11435 (2342770) | 2342770..2343779 | + | 1010 | Protein_2216 | arsenic transporter | - |
| O6R07_RS11440 (2343792) | 2343792..2343944 | + | 153 | Protein_2217 | arsenate reductase | - |
| O6R07_RS11445 (2344331) | 2344331..2344798 | - | 468 | WP_000702495.1 | protein YfjT | - |
| O6R07_RS11450 (2344822) | 2344822..2345265 | - | 444 | WP_000824222.1 | lipoprotein YfjS | - |
| O6R07_RS11455 (2345265) | 2345265..2345501 | - | 237 | WP_001144029.1 | protein YpjK | - |
| O6R07_RS11460 (2345542) | 2345542..2346243 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| O6R07_RS11465 (2346460) | 2346460..2347281 | - | 822 | WP_000197391.1 | DUF932 domain-containing protein | - |
| O6R07_RS11470 (2347373) | 2347373..2348236 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| O6R07_RS11475 (2348591) | 2348591..2348962 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| O6R07_RS11480 (2348955) | 2348955..2350028 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| O6R07_RS11485 (2350170) | 2350170..2350433 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| O6R07_RS11490 (2350793) | 2350793..2352409 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| O6R07_RS11495 (2352406) | 2352406..2354595 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| O6R07_RS11500 (2354773) | 2354773..2355399 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| O6R07_RS11505 (2355552) | 2355552..2356961 | - | 1410 | WP_000481742.1 | YfjI family protein | - |
| O6R07_RS11510 (2357090) | 2357090..2357302 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| O6R07_RS11515 (2357346) | 2357346..2358302 | + | 957 | WP_000510827.1 | protein YfjH | - |
| O6R07_RS11520 (2358546) | 2358546..2359787 | - | 1242 | WP_000101722.1 | Prophage integrase IntA ; Integrase | Integrase |
| O6R07_RS11530 (2360568) | 2360568..2361050 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| O6R07_RS11535 (2361221) | 2361221..2361658 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| O6R07_RS11540 (2361648) | 2361648..2361938 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| O6R07_RS11545 (2362000) | 2362000..2362341 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| O6R07_RS11550 (2362490) | 2362490..2364151 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| O6R07_RS11555 (2364237) | 2364237..2365115 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0.003 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0.003 |