MGE detailed information
MGE type: Genomic_island MGE length: 11326 bp
Accession: NZ_CP113536 Location: 881343..892668 Organism: Salmonella enterica strain ZCX Replicon: chromosome
Accession: NZ_CP113536 Location: 881343..892668 Organism: Salmonella enterica strain ZCX Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OXV07_RS04280 (876789) | 876789..877887 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| OXV07_RS04285 (877897) | 877897..879414 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| OXV07_RS04290 (879490) | 879490..880035 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| OXV07_RS04295 (880300) | 880300..881058 | + | 759 | WP_000244329.1 | amidase activator ActS | - |
| OXV07_RS04305 (881343) | 881343..882149 | - | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| OXV07_RS04310 (882424) | 882424..882675 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| OXV07_RS04315 (882852) | 882852..883079 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| OXV07_RS04320 (883079) | 883079..883477 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| OXV07_RS04325 (884283) | 884283..884819 | + | 537 | WP_001038506.1 | Attachment invasion locus protein | VF |
| OXV07_RS04330 (884866) | 884866..885498 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| OXV07_RS04335 (886217) | 886217..886801 | + | 585 | WP_001244638.1 | putative fimbrial-like protein YbgD | VF |
| OXV07_RS04340 (886921) | 886921..889410 | + | 2490 | WP_023198253.1 | Outer membrane usher protein PapC | VF |
| OXV07_RS04345 (889451) | 889451..890194 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| OXV07_RS04350 (890191) | 890191..891267 | + | 1077 | WP_000141329.1 | outer membrane protein | - |
| OXV07_RS04355 (891411) | 891411..891923 | + | 513 | WP_000336259.1 | CaiF/GrlA family transcriptional regulator | - |
| OXV07_RS04360 (891910) | 891910..892668 | + | 759 | WP_000134791.1 | transcriptional regulator | - |
| OXV07_RS04365 (892878) | 892878..893774 | - | 897 | WP_000503673.1 | nickel/cobalt efflux protein RcnA | - |
| OXV07_RS04370 (893896) | 893896..894168 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| OXV07_RS04375 (894199) | 894199..895428 | - | 1230 | WP_000036825.1 | amino acid permease | - |
| OXV07_RS04380 (895570) | 895570..896025 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| OXV07_RS04385 (896129) | 896129..896992 | + | 864 | WP_001270766.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Genomic island | TA439 | NC_003197 | 3186004..3197296 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0 |