MGE detailed information
MGE type: Genomic_island MGE length: 11326 bp
Accession: NZ_CP113535 Location: 960425..971750 Organism: Salmonella enterica strain ZLQ Replicon: chromosome
Accession: NZ_CP113535 Location: 960425..971750 Organism: Salmonella enterica strain ZLQ Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OXV11_RS04685 (955871) | 955871..956969 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| OXV11_RS04690 (956979) | 956979..958496 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| OXV11_RS04695 (958572) | 958572..959117 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| OXV11_RS04700 (959382) | 959382..960140 | + | 759 | WP_000244329.1 | amidase activator ActS | - |
| OXV11_RS04710 (960425) | 960425..961231 | - | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| OXV11_RS04715 (961506) | 961506..961757 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| OXV11_RS04720 (961934) | 961934..962161 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| OXV11_RS04725 (962161) | 962161..962559 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| OXV11_RS04730 (963365) | 963365..963901 | + | 537 | WP_001038506.1 | hypothetical protein | VF |
| OXV11_RS04735 (963948) | 963948..964580 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| OXV11_RS04740 (965299) | 965299..965883 | + | 585 | WP_001244638.1 | hypothetical protein | VF |
| OXV11_RS04745 (966003) | 966003..968492 | + | 2490 | WP_000705483.1 | hypothetical protein | VF |
| OXV11_RS04750 (968533) | 968533..969276 | + | 744 | WP_000798504.1 | Galactose-6-phosphate isomerase subunit LacB | VF |
| OXV11_RS04755 (969273) | 969273..970349 | + | 1077 | WP_000141329.1 | outer membrane protein | - |
| OXV11_RS04760 (970493) | 970493..971005 | + | 513 | WP_000336259.1 | CaiF/GrlA family transcriptional regulator | - |
| OXV11_RS04765 (970992) | 970992..971750 | + | 759 | WP_000134791.1 | transcriptional regulator | - |
| OXV11_RS04770 (971960) | 971960..972826 | - | 867 | WP_000503682.1 | nickel/cobalt efflux protein RcnA | - |
| OXV11_RS04775 (972948) | 972948..973220 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| OXV11_RS04780 (973251) | 973251..974480 | - | 1230 | WP_000036825.1 | amino acid permease | - |
| OXV11_RS04785 (974622) | 974622..975077 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| OXV11_RS04790 (975181) | 975181..976044 | + | 864 | WP_001270766.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Genomic island | TA439 | NC_003197 | 3186004..3197296 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0 |