MGE detailed information
MGE type: Prophage MGE length: 8693 bp
Accession: NZ_CP110931 Location: 305419..314111 Organism: Salmonella enterica strain XM3104 Replicon: chromosome
Accession: NZ_CP110931 Location: 305419..314111 Organism: Salmonella enterica strain XM3104 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ORG44_RS01355 (300459) | 300459..301562 | + | 1104 | WP_001535347.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| ORG44_RS01360 (301740) | 301740..302009 | + | 270 | WP_001275017.1 | DUF1778 domain-containing protein | - |
| ORG44_RS01365 (302013) | 302013..302531 | + | 519 | WP_000369560.1 | GNAT family N-acetyltransferase | - |
| ORG44_RS01370 (302528) | 302528..302911 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| ORG44_RS01375 (303333) | 303333..304436 | + | 1104 | WP_023235350.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| ORG44_RS01380 (304496) | 304496..305422 | + | 927 | WP_000003005.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| ORG44_RS01385 (305419) | 305419..306696 | + | 1278 | WP_001541045.1 | branched chain amino acid ABC transporter permease LivM | - |
| ORG44_RS01390 (306693) | 306693..307460 | + | 768 | WP_000082080.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| ORG44_RS01395 (307462) | 307462..308175 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| ORG44_RS01400 (308306) | 308306..308527 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| ORG44_RS01405 (308524) | 308524..308892 | + | 369 | WP_000174963.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| ORG44_RS01410 (309151) | 309151..310467 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| ORG44_RS01415 (310572) | 310572..311459 | + | 888 | WP_038394052.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| ORG44_RS01420 (311456) | 311456..312301 | + | 846 | WP_023235349.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| ORG44_RS01425 (312304) | 312304..313374 | + | 1071 | WP_011264401.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| ORG44_RS01430 (313371) | 313371..314111 | + | 741 | WP_000073538.1 | glycerophosphodiester phosphodiesterase | - |
| ORG44_RS01435 (314124) | 314124..314540 | - | 417 | WP_000826046.1 | DUF2756 family protein | - |
| ORG44_RS01440 (314666) | 314666..316408 | + | 1743 | WP_011264400.1 | gamma-glutamyltransferase | - |
| ORG44_RS01445 (316453) | 316453..317487 | - | 1035 | Protein_285 | phosphotriesterase-related protein | - |
| ORG44_RS01450 (317484) | 317484..318455 | - | 972 | WP_001038953.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.01 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.01 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.01 |