MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP110859 Location: 1101896..1133776 Organism: Escherichia coli strain TSW4881-W1 Replicon: chromosome
Accession: NZ_CP110859 Location: 1101896..1133776 Organism: Escherichia coli strain TSW4881-W1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OQ464_RS05305 (1098080) | 1098080..1099348 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| OQ464_RS05310 (1099368) | 1099368..1100345 | - | 978 | WP_000993126.1 | glutarate dioxygenase GlaH | - |
| OQ464_RS05315 (1100681) | 1100681..1102933 | - | 2253 | Protein_1040 | alpha-amylase family glycosyl hydrolase | - |
| OQ464_RS05325 (1104319) | 1104319..1105692 | + | 1374 | Protein_1041 | DUF5507 domain-containing protein | - |
| OQ464_RS05330 (1106038) | 1106038..1106196 | + | 159 | Protein_1042 | recombinase family protein | - |
| OQ464_RS05335 (1106420) | 1106420..1106539 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| OQ464_RS05340 (1106604) | 1106604..1111184 | + | 4581 | WP_010723187.1 | putative autotransporter | VF |
| OQ464_RS05345 (1111548) | 1111548..1111877 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| OQ464_RS05350 (1111898) | 1111898..1112215 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| OQ464_RS05355 (1112253) | 1112253..1112453 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| OQ464_RS05360 (1112462) | 1112462..1112944 | - | 483 | WP_001407480.1 | RadC family protein | - |
| OQ464_RS05365 (1112953) | 1112953..1113411 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| OQ464_RS05370 (1113514) | 1113514..1113698 | - | 185 | Protein_1050 | DUF905 family protein | - |
| OQ464_RS05375 (1114309) | 1114309..1116012 | - | 1704 | WP_000896263.1 | protein YfjW | - |
| OQ464_RS05380 (1116154) | 1116154..1117163 | + | 1010 | Protein_1052 | arsenic transporter | - |
| OQ464_RS05385 (1117176) | 1117176..1117328 | + | 153 | Protein_1053 | arsenate reductase | - |
| OQ464_RS05390 (1117715) | 1117715..1118182 | - | 468 | WP_000702495.1 | protein YfjT | - |
| OQ464_RS05395 (1118206) | 1118206..1118649 | - | 444 | WP_000824222.1 | lipoprotein YfjS | - |
| OQ464_RS05400 (1118649) | 1118649..1118885 | - | 237 | WP_001144029.1 | protein YpjK | - |
| OQ464_RS05405 (1118926) | 1118926..1119627 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| OQ464_RS05410 (1119844) | 1119844..1120665 | - | 822 | WP_000197391.1 | DUF932 domain-containing protein | - |
| OQ464_RS05415 (1120757) | 1120757..1121620 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| OQ464_RS05420 (1121975) | 1121975..1122346 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| OQ464_RS05425 (1122339) | 1122339..1123412 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| OQ464_RS05430 (1123554) | 1123554..1123817 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| OQ464_RS05435 (1124177) | 1124177..1125793 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| OQ464_RS05440 (1125790) | 1125790..1127979 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| OQ464_RS05445 (1128157) | 1128157..1128783 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| OQ464_RS05450 (1128936) | 1128936..1130345 | - | 1410 | WP_000481742.1 | YfjI family protein | - |
| OQ464_RS05455 (1130474) | 1130474..1130686 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| OQ464_RS05460 (1130730) | 1130730..1131686 | + | 957 | WP_000510827.1 | protein YfjH | - |
| OQ464_RS05465 (1131930) | 1131930..1133171 | - | 1242 | WP_000101722.1 | Prophage integrase IntA ; Integrase | Integrase |
| OQ464_RS05475 (1133952) | 1133952..1134434 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| OQ464_RS05480 (1134605) | 1134605..1135042 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| OQ464_RS05485 (1135032) | 1135032..1135322 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| OQ464_RS05490 (1135384) | 1135384..1135725 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| OQ464_RS05495 (1135874) | 1135874..1137535 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| OQ464_RS05500 (1137621) | 1137621..1138499 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |