MGE detailed information
MGE type: Conjugative plasmid MGE length: 54993 bp
Accession: NZ_CP110811 Location: 1..54993 Organism: Pseudomonas syringae strain MUP32 Replicon: plasmid pMUP32b
Accession: NZ_CP110811 Location: 1..54993 Organism: Pseudomonas syringae strain MUP32 Replicon: plasmid pMUP32b
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OQB64_RS26620 (OQB64_26620) | 350..1663 | + | 1314 | WP_032495804.1 | replication initiation protein | - |
| OQB64_RS26625 (OQB64_26625) | 1889..2182 | + | 294 | WP_003348560.1 | HU family DNA-binding protein | - |
| OQB64_RS26630 (OQB64_26630) | 2269..2454 | + | 186 | WP_003348562.1 | hypothetical protein | Antitoxin Detail |
| OQB64_RS26635 (OQB64_26635) | 2454..2747 | + | 294 | WP_003348565.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OQB64_RS26640 (OQB64_26640) | 2887..3414 | + | 528 | WP_003348567.1 | hypothetical protein | - |
| OQB64_RS26645 (OQB64_26645) | 3411..3863 | - | 453 | WP_227443078.1 | hypothetical protein | Relaxase |
| OQB64_RS26650 (OQB64_26650) | 3753..3980 | + | 228 | WP_227443077.1 | S24 family peptidase | - |
| OQB64_RS26655 (OQB64_26655) | 3958..4221 | + | 264 | WP_080270888.1 | DNA-directed DNA polymerase | - |
| OQB64_RS26660 (OQB64_26660) | 4435..4848 | - | 414 | WP_003348573.1 | DUF3757 domain-containing protein | - |
| OQB64_RS26665 (OQB64_26665) | 5273..6313 | + | 1041 | WP_080270889.1 | DUF4113 domain-containing protein | - |
| OQB64_RS26670 (OQB64_26670) | 6467..6754 | + | 288 | WP_074454502.1 | hypothetical protein | - |
| OQB64_RS26675 (OQB64_26675) | 6848..7258 | + | 411 | WP_005782529.1 | hypothetical protein | - |
| OQB64_RS26680 (OQB64_26680) | 7596..7796 | + | 201 | WP_003348581.1 | hypothetical protein | - |
| OQB64_RS26685 (OQB64_26685) | 7909..8559 | + | 651 | WP_003348583.1 | AAA family ATPase | - |
| OQB64_RS26690 (OQB64_26690) | 8549..8836 | + | 288 | WP_003348585.1 | hypothetical protein | - |
| OQB64_RS26695 (OQB64_26695) | 9048..9689 | + | 642 | WP_110768561.1 | SOS response-associated peptidase | - |
| OQB64_RS26700 (OQB64_26700) | 9877..10452 | + | 576 | WP_003348590.1 | PBECR2 nuclease fold domain-containing protein | - |
| OQB64_RS26705 (OQB64_26705) | 11390..12364 | - | 975 | WP_080271137.1 | IS91 family transposase ISMno24 | Transposase |
| OQB64_RS26710 (OQB64_26710) | 12393..12755 | - | 363 | WP_124733765.1 | hypothetical protein | - |
| OQB64_RS26715 (OQB64_26715) | 12995..13243 | + | 249 | WP_004662018.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| OQB64_RS26720 (OQB64_26720) | 13256..13606 | + | 351 | WP_003348598.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OQB64_RS26725 (OQB64_26725) | 14238..19976 | + | 5739 | WP_024650327.1 | hypothetical protein | - |
| OQB64_RS26730 (OQB64_26730) | 20177..20449 | - | 273 | WP_003348606.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OQB64_RS26735 (OQB64_26735) | 20439..20624 | - | 186 | WP_005730485.1 | hypothetical protein | Antitoxin Detail |
| OQB64_RS26740 (OQB64_26740) | 20675..20953 | - | 279 | WP_003320513.1 | hypothetical protein | - |
| OQB64_RS26745 (OQB64_26745) | 21046..21177 | - | 132 | Protein_25 | resolvase | - |
| OQB64_RS26750 (OQB64_26750) | 21611..21937 | - | 327 | WP_003319696.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| OQB64_RS26755 (OQB64_26755) | 21934..22158 | - | 225 | WP_003319697.1 | antitoxin MazE family protein | Antitoxin Detail |
| OQB64_RS26760 (OQB64_26760) | 22648..23280 | + | 633 | WP_003381804.1 | ParA family protein | - |
| OQB64_RS26765 (OQB64_26765) | 23316..23570 | + | 255 | WP_003381801.1 | hypothetical protein | - |
| OQB64_RS26770 (OQB64_26770) | 23995..24660 | - | 666 | WP_024647998.1 | LexA family transcriptional regulator | - |
| OQB64_RS26775 (OQB64_26775) | 24748..24978 | + | 231 | WP_010215521.1 | Cro/CI family transcriptional regulator | - |
| OQB64_RS26780 (OQB64_26780) | 25330..26028 | + | 699 | WP_024650160.1 | hypothetical protein | VF |
| OQB64_RS26785 (OQB64_26785) | 26025..26363 | + | 339 | WP_003347417.1 | hypothetical protein | - |
| OQB64_RS26790 (OQB64_26790) | 26376..26651 | + | 276 | WP_024650162.1 | VirB3 family type IV secretion system protein | - |
| OQB64_RS26795 (OQB64_26795) | 26712..29264 | + | 2553 | WP_024650163.1 | VirB4 family type IV secretion system protein | - |
| OQB64_RS26800 (OQB64_26800) | 29261..29947 | + | 687 | WP_024650164.1 | P-type DNA transfer protein VirB5 | - |
| OQB64_RS26805 (OQB64_26805) | 29980..30333 | + | 354 | WP_024650165.1 | hypothetical protein | - |
| OQB64_RS26810 (OQB64_26810) | 30344..31276 | + | 933 | WP_024650166.1 | type IV secretion system protein | - |
| OQB64_RS26815 (OQB64_26815) | 31344..31658 | + | 315 | WP_080271125.1 | conjugal transfer protein | - |
| OQB64_RS26820 (OQB64_26820) | 31696..32484 | + | 789 | WP_024650167.1 | type IV secretion system protein | - |
| OQB64_RS26825 (OQB64_26825) | 32474..33283 | + | 810 | WP_024650168.1 | P-type conjugative transfer protein VirB9 | - |
| OQB64_RS26830 (OQB64_26830) | 33270..34619 | + | 1350 | WP_024650169.1 | hypothetical protein | VF |
| OQB64_RS26835 (OQB64_26835) | 34629..35684 | + | 1056 | WP_024650170.1 | Type IV secretion system protein VirB11 | VF |
| OQB64_RS26840 (OQB64_26840) | 35725..36084 | + | 360 | WP_227443035.1 | hypothetical protein | - |
| OQB64_RS26845 (OQB64_26845) | 36069..36425 | + | 357 | WP_024650171.1 | hypothetical protein | - |
| OQB64_RS26850 (OQB64_26850) | 36702..37325 | + | 624 | WP_003347396.1 | glycoside hydrolase family 25 protein | - |
| OQB64_RS26855 (OQB64_26855) | 37660..40080 | + | 2421 | WP_116894210.1 | ATP-binding protein | - |
| OQB64_RS26860 (OQB64_26860) | 40192..40425 | + | 234 | WP_003347392.1 | hypothetical protein | - |
| OQB64_RS26865 (OQB64_26865) | 40425..42098 | + | 1674 | WP_266008294.1 | type IV secretory system conjugative DNA transfer family protein | - |
| OQB64_RS26870 (OQB64_26870) | 42139..42501 | + | 363 | WP_055007020.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| OQB64_RS26875 (OQB64_26875) | 42529..44694 | + | 2166 | WP_266008298.1 | type IA DNA topoisomerase | - |
| OQB64_RS26880 (OQB64_26880) | 44723..45007 | + | 285 | WP_003347380.1 | hypothetical protein | - |
| OQB64_RS26885 (OQB64_26885) | 45035..45607 | + | 573 | WP_266008301.1 | single-stranded DNA-binding protein | - |
| OQB64_RS26890 (OQB64_26890) | 45948..46667 | + | 720 | WP_003347375.1 | StbB family protein | - |
| OQB64_RS26895 (OQB64_26895) | 46664..47236 | + | 573 | WP_024647985.1 | hypothetical protein | - |
| OQB64_RS26900 (OQB64_26900) | 47251..47640 | - | 390 | WP_020304529.1 | hypothetical protein | - |
| OQB64_RS26905 (OQB64_26905) | 48007..48357 | + | 351 | WP_003347368.1 | hypothetical protein | Relaxase |
| OQB64_RS26910 (OQB64_26910) | 48347..52087 | + | 3741 | WP_266008304.1 | relaxase | - |
| OQB64_RS26915 (OQB64_26915) | 52344..53009 | + | 666 | WP_024647937.1 | XopO/AvrRps4 family type III secretion system effector | - |
| OQB64_RS26920 (OQB64_26920) | 53384..53719 | + | 336 | WP_024647938.1 | GntR family transcriptional regulator | - |
| OQB64_RS26925 (OQB64_26925) | 53799..54701 | + | 903 | WP_003347355.1 | hypothetical protein | - |
| OQB64_RS26930 (OQB64_26930) | 54718..54945 | + | 228 | WP_024647939.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|