MGE detailed information
MGE type: Genomic_island MGE length: 10581 bp
Accession: NZ_CP110657 Location: 1225282..1235862 Organism: Salmonella enterica subsp. enterica strain S2122 Replicon: chromosome
Accession: NZ_CP110657 Location: 1225282..1235862 Organism: Salmonella enterica subsp. enterica strain S2122 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OOK64_RS06180 (1221216) | 1221216..1221671 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| OOK64_RS06185 (1221813) | 1221813..1223042 | + | 1230 | WP_000036825.1 | amino acid permease | - |
| OOK64_RS06190 (1223073) | 1223073..1223345 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| OOK64_RS06195 (1223467) | 1223467..1224327 | + | 861 | WP_000503684.1 | nickel/cobalt efflux protein RcnA | - |
| OOK64_RS06200 (1224537) | 1224537..1225295 | - | 759 | WP_000134791.1 | transcriptional regulator | - |
| OOK64_RS06205 (1225282) | 1225282..1225794 | - | 513 | WP_000336259.1 | CaiF/GrlA family transcriptional regulator | - |
| OOK64_RS06210 (1225938) | 1225938..1227014 | - | 1077 | WP_000141329.1 | outer membrane protein | - |
| OOK64_RS06215 (1227011) | 1227011..1227754 | - | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| OOK64_RS06220 (1227795) | 1227795..1230284 | - | 2490 | WP_000705483.1 | Outer membrane usher protein PapC | VF |
| OOK64_RS06225 (1230404) | 1230404..1230988 | - | 585 | WP_001244638.1 | putative fimbrial-like protein YbgD | VF |
| OOK64_RS06230 (1231707) | 1231707..1232339 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| OOK64_RS06235 (1232386) | 1232386..1232922 | - | 537 | WP_001038506.1 | Attachment invasion locus protein | VF |
| OOK64_RS06240 (1233728) | 1233728..1234126 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| OOK64_RS06245 (1234126) | 1234126..1234353 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| OOK64_RS06250 (1234530) | 1234530..1234781 | + | 252 | WP_001540858.1 | hypothetical protein | - |
| OOK64_RS06255 (1235056) | 1235056..1235862 | + | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| OOK64_RS06265 (1236147) | 1236147..1236905 | - | 759 | WP_000244329.1 | amidase activator ActS | - |
| OOK64_RS06270 (1237170) | 1237170..1237715 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| OOK64_RS06275 (1237791) | 1237791..1239308 | - | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Genomic island | TA439 | NC_003197 | 3186004..3197296 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.002 |