MGE detailed information
MGE type: Prophage MGE length: 34798 bp
Accession: NZ_CP110017 Location: 1718642..1753439 Organism: Escherichia coli strain HE_50 Replicon: chromosome
Accession: NZ_CP110017 Location: 1718642..1753439 Organism: Escherichia coli strain HE_50 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OLR76_RS08460 (1715157) | 1715157..1715903 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| OLR76_RS08465 (1715992) | 1715992..1716678 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| OLR76_RS08470 (1716855) | 1716855..1717058 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| OLR76_RS08475 (1717093) | 1717093..1718553 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| OLR76_RS08480 (1718642) | 1718642..1720009 | - | 1368 | Protein_1658 | MHS family MFS transporter | - |
| OLR76_RS08485 (1720530) | 1720530..1720643 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| OLR76_RS08490 (1720712) | 1720712..1720945 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| OLR76_RS08495 (1721262) | 1721262..1721852 | + | 591 | WP_282983535.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| OLR76_RS08500 (1721950) | 1721950..1722525 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| OLR76_RS08505 (1722525) | 1722525..1723487 | - | 963 | WP_001027733.1 | phage tail protein | - |
| OLR76_RS08510 (1723438) | 1723438..1724007 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| OLR76_RS08515 (1724396) | 1724396..1724629 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| OLR76_RS08520 (1724687) | 1724687..1725097 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| OLR76_RS08525 (1725249) | 1725249..1725422 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| OLR76_RS08530 (1725594) | 1725594..1725749 | - | 156 | WP_001309517.1 | protein YnfN | - |
| OLR76_RS08535 (1725828) | 1725828..1725893 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| OLR76_RS08540 (1725896) | 1725896..1726084 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| OLR76_RS08545 (1726095) | 1726095..1726307 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| OLR76_RS08550 (1726670) | 1726670..1727167 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| OLR76_RS08555 (1727164) | 1727164..1727697 | - | 534 | WP_001092971.1 | lysozyme | - |
| OLR76_RS08560 (1727694) | 1727694..1728005 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| OLR76_RS08565 (1728010) | 1728010..1728225 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| OLR76_RS08570 (1728445) | 1728445..1728615 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| OLR76_RS08575 (1728979) | 1728979..1729194 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| OLR76_RS08580 (1729495) | 1729495..1729707 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| OLR76_RS08585 (1729762) | 1729762..1729851 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| OLR76_RS08590 (1730129) | 1730129..1730881 | - | 753 | WP_001047135.1 | antitermination protein | - |
| OLR76_RS08595 (1730895) | 1730895..1731944 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| OLR76_RS08600 (1731946) | 1731946..1732224 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| OLR76_RS08605 (1732291) | 1732291..1732542 | - | 252 | WP_000980994.1 | protein Rem | - |
| OLR76_RS08610 (1732759) | 1732759..1732914 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| OLR76_RS08615 (1732986) | 1732986..1733273 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| OLR76_RS08620 (1733273) | 1733273..1733512 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| OLR76_RS08625 (1733537) | 1733537..1733842 | + | 306 | WP_001326990.1 | protein YdfV | - |
| OLR76_RS08630 (1734045) | 1734045..1734377 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| OLR76_RS08635 (1734814) | 1734814..1734963 | - | 150 | WP_011443592.1 | protein YdfW | - |
| OLR76_RS08640 (1734998) | 1734998..1735276 | - | 279 | Protein_1690 | protein YdfX | - |
| OLR76_RS08645 (1735260) | 1735260..1735490 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| OLR76_RS08650 (1735574) | 1735574..1735981 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| OLR76_RS08655 (1736148) | 1736148..1736303 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| OLR76_RS08660 (1736305) | 1736305..1736433 | + | 129 | WP_000344964.1 | protein YdfB | - |
| OLR76_RS08665 (1736463) | 1736463..1736681 | + | 219 | WP_001171942.1 | protein YdfC | - |
| OLR76_RS08670 (1737249) | 1737249..1737437 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| OLR76_RS08675 (1737434) | 1737434..1737625 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| OLR76_RS08680 (1737718) | 1737718..1738485 | + | 768 | Protein_1698 | exonuclease | - |
| OLR76_RS08685 (1738482) | 1738482..1739177 | + | 696 | Protein_1699 | IS3 family transposase IS2 | Transposase |
| OLR76_RS08690 (1739191) | 1739191..1739496 | + | 306 | Protein_1700 | DUF3596 domain-containing protein | - |
| OLR76_RS08700 (1740827) | 1740827..1741684 | + | 858 | Protein_1702 | Putative defective protein IntQ ; Integrase | Integrase |
| OLR76_RS08705 (1741872) | 1741872..1742891 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| OLR76_RS08710 (1742903) | 1742903..1744117 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| OLR76_RS08715 (1744323) | 1744323..1744649 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| OLR76_RS08720 (1744784) | 1744784..1745125 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| OLR76_RS08725 (1745160) | 1745160..1745720 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| OLR76_RS08730 (1745723) | 1745723..1746433 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| OLR76_RS08735 (1746541) | 1746541..1746846 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| OLR76_RS08740 (1747045) | 1747045..1749471 | + | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| OLR76_RS08745 (1749532) | 1749532..1751955 | + | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| OLR76_RS08750 (1751966) | 1751966..1752583 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| OLR76_RS08755 (1752585) | 1752585..1753439 | + | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| OLR76_RS08760 (1753482) | 1753482..1754096 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| OLR76_RS08765 (1754255) | 1754255..1755547 | + | 1293 | WP_071592181.1 | voltage-gated ClC-type chloride channel ClcB | - |
| OLR76_RS08770 (1755500) | 1755500..1756195 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| OLR76_RS08775 (1756320) | 1756320..1757540 | - | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0 |