MGE detailed information
MGE type: Prophage MGE length: 8694 bp
Accession: NZ_CP107010 Location: 310471..319164 Organism: Salmonella enterica subsp. enterica serovar Paratyphi B strain SZ21B23 Replicon: chromosome
Accession: NZ_CP107010 Location: 310471..319164 Organism: Salmonella enterica subsp. enterica serovar Paratyphi B strain SZ21B23 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OF884_RS01385 (306276) | 306276..307379 | + | 1104 | WP_001839269.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| OF884_RS01390 (307462) | 307462..307596 | - | 135 | WP_012219321.1 | hypothetical protein | - |
| OF884_RS01395 (307574) | 307574..307957 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| OF884_RS01400 (308379) | 308379..309488 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| OF884_RS01405 (309548) | 309548..310474 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| OF884_RS01410 (310471) | 310471..311748 | + | 1278 | WP_000803764.1 | branched chain amino acid ABC transporter permease LivM | - |
| OF884_RS01415 (311745) | 311745..312512 | + | 768 | WP_000082083.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| OF884_RS01420 (312514) | 312514..313227 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| OF884_RS01425 (313360) | 313360..313581 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| OF884_RS01430 (313578) | 313578..313946 | + | 369 | WP_001536192.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| OF884_RS01435 (314205) | 314205..315521 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| OF884_RS01440 (315626) | 315626..316513 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| OF884_RS01445 (316510) | 316510..317355 | + | 846 | WP_023210218.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| OF884_RS01450 (317357) | 317357..318427 | + | 1071 | WP_023210217.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| OF884_RS01455 (318424) | 318424..319164 | + | 741 | WP_000073540.1 | glycerophosphodiester phosphodiesterase | - |
| OF884_RS01460 (319177) | 319177..319593 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| OF884_RS01465 (319719) | 319719..321461 | + | 1743 | WP_000805095.1 | gamma-glutamyltransferase | - |
| OF884_RS01470 (321506) | 321506..322540 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| OF884_RS01475 (322537) | 322537..323508 | - | 972 | WP_001038949.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.01 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.01 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.01 |