MGE detailed information
MGE type: Mobilizable plasmid MGE length: 92732 bp
Accession: NZ_CP104847 Location: 1..92732 Organism: Escherichia coli strain DFS.1 Replicon: plasmid unnamed1
Accession: NZ_CP104847 Location: 1..92732 Organism: Escherichia coli strain DFS.1 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N7219_RS24190 (225) | 225..970 | + | 746 | Protein_1 | conjugal transfer pilus acetylase TraX | - |
| N7219_RS24195 (1025) | 1025..1585 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| N7219_RS24200 (1716) | 1716..1927 | + | 212 | Protein_3 | hypothetical protein | - |
| N7219_RS24205 (2618) | 2618..2908 | + | 291 | WP_261631932.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| N7219_RS24210 (2905) | 2905..3254 | + | 350 | Protein_5 | IS66 family transposase ISEc23 | Transposase |
| N7219_RS24215 (3285) | 3285..4898 | + | 1614 | Protein_6 | IS66-like element ISEc23 family transposase | - |
| N7219_RS24220 (4976) | 4976..5262 | + | 287 | Protein_7 | DUF2726 domain-containing protein | - |
| - (5229) | 5229..5289 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - (5229) | 5229..5289 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - (5229) | 5229..5289 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - (5229) | 5229..5289 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| N7219_RS24225 (5334) | 5334..5468 | + | 135 | WP_023144756.1 | Hok/Gef family protein | Toxin Detail |
| N7219_RS24230 (5764) | 5764..6018 | + | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| N7219_RS24235 (6124) | 6124..6255 | + | 132 | Protein_10 | protein CopA/IncA | - |
| N7219_RS24240 (6255) | 6255..6329 | + | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| N7219_RS24245 (6322) | 6322..7179 | + | 858 | WP_001617855.1 | incFII family plasmid replication initiator RepA | - |
| N7219_RS24250 (8119) | 8119..8679 | + | 561 | WP_261631931.1 | CPBP family intramembrane metalloprotease | - |
| N7219_RS24255 (8864) | 8864..9121 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| N7219_RS24260 (9054) | 9054..9455 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| N7219_RS24265 (9740) | 9740..11050 | + | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| N7219_RS24270 (11079) | 11079..11177 | + | 99 | Protein_17 | IS1 family transposase | - |
| N7219_RS24275 (11327) | 11327..12187 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| N7219_RS24280 (12486) | 12486..13190 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| N7219_RS24285 (13257) | 13257..13637 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| N7219_RS24290 (13642) | 13642..13821 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| N7219_RS24295 (13849) | 13849..14127 | + | 279 | Protein_22 | pdcB | - |
| N7219_RS24300 (14132) | 14132..14545 | + | 414 | Protein_23 | IS3 family transposase ISLad1 | Transposase |
| N7219_RS24305 (14495) | 14495..14830 | - | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| N7219_RS24310 (15040) | 15040..16020 | - | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| N7219_RS24315 (16264) | 16264..17667 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| N7219_RS24320 (17654) | 17654..18586 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| N7219_RS24325 (18695) | 18695..19024 | - | 330 | Protein_28 | TOBE domain-containing protein | - |
| N7219_RS24335 (19885) | 19885..20043 | + | 159 | WP_228955855.1 | abortive infection family protein | - |
| N7219_RS24340 (20202) | 20202..21173 | - | 972 | Protein_31 | hypothetical protein | - |
| N7219_RS24345 (21929) | 21929..22906 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| N7219_RS24350 (23191) | 23191..23931 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| N7219_RS24355 (24052) | 24052..24240 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| N7219_RS24360 (24321) | 24321..25018 | + | 698 | WP_223293341.1 | IS1 family transposase IS1R | Transposase |
| N7219_RS24365 (25034) | 25034..25363 | + | 330 | Protein_36 | TOBE domain-containing protein | - |
| N7219_RS24370 (25472) | 25472..26404 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| N7219_RS24375 (26391) | 26391..27794 | - | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| N7219_RS24380 (28038) | 28038..29018 | + | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| N7219_RS24385 (29228) | 29228..29563 | + | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| N7219_RS24390 (29513) | 29513..29926 | - | 414 | Protein_41 | IS3 family transposase ISLad1 | Transposase |
| N7219_RS24395 (29931) | 29931..30209 | - | 279 | Protein_42 | pdcB | - |
| N7219_RS24400 (30237) | 30237..30416 | - | 180 | WP_001513661.1 | hypothetical protein | - |
| N7219_RS24405 (30421) | 30421..30801 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| N7219_RS24410 (30801) | 30801..31022 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| N7219_RS24415 (31205) | 31205..31321 | + | 117 | Protein_46 | type I restriction endonuclease subunit M | - |
| N7219_RS24420 (31377) | 31377..32074 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| N7219_RS24425 (32211) | 32211..33104 | - | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| N7219_RS24430 (33147) | 33147..34142 | - | 996 | WP_000246636.1 | hypothetical protein | - |
| N7219_RS24435 (34850) | 34850..35068 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| N7219_RS24440 (35070) | 35070..35375 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| N7219_RS24445 (35376) | 35376..36182 | + | 807 | WP_000016982.1 | site-specific integrase | - |
| N7219_RS24450 (36956) | 36956..37711 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| N7219_RS24455 (38299) | 38299..39465 | + | 1167 | WP_000772446.1 | hypothetical protein | VF |
| N7219_RS24460 (39465) | 39465..40436 | + | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| N7219_RS24465 (41303) | 41303..42205 | + | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| N7219_RS24470 (42202) | 42202..42513 | + | 312 | WP_032143366.1 | hypothetical protein | - |
| N7219_RS24475 (42590) | 42590..43273 | + | 684 | WP_000086185.1 | DNA methylase | - |
| N7219_RS24480 (43274) | 43274..43495 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| N7219_RS24485 (43425) | 43425..43943 | + | 519 | WP_123325260.1 | DUF1380 family protein | - |
| N7219_RS24490 (43994) | 43994..44770 | + | 777 | WP_001753849.1 | hypothetical protein | - |
| N7219_RS24495 (45187) | 45187..45612 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| N7219_RS24500 (45659) | 45659..46081 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| N7219_RS24505 (46078) | 46078..46269 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| N7219_RS24510 (47304) | 47304..47534 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| N7219_RS24515 (47586) | 47586..48947 | + | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| N7219_RS24520 (48995) | 48995..49558 | + | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| N7219_RS24525 (49584) | 49584..49814 | + | 231 | WP_021526513.1 | hypothetical protein | - |
| N7219_RS24530 (49709) | 49709..49984 | + | 276 | WP_071780182.1 | hypothetical protein | - |
| N7219_RS24535 (49977) | 49977..50312 | + | 336 | WP_013023883.1 | hypothetical protein | - |
| N7219_RS24540 (50225) | 50225..50431 | + | 207 | WP_000547975.1 | hypothetical protein | - |
| N7219_RS24545 (50457) | 50457..50996 | + | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| N7219_RS24550 (51059) | 51059..51292 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| N7219_RS24555 (51358) | 51358..53316 | + | 1959 | WP_000117179.1 | ParB/RepB/Spo0J family partition protein | - |
| N7219_RS24560 (53371) | 53371..53805 | + | 435 | WP_000845940.1 | conjugation system SOS inhibitor PsiB | - |
| N7219_RS24565 (53802) | 53802..54564 | + | 763 | Protein_76 | plasmid SOS inhibition protein A | - |
| - (54533) | 54533..54719 | + | 187 | NuclAT_0 | - | - |
| - (54533) | 54533..54719 | + | 187 | NuclAT_0 | - | - |
| - (54533) | 54533..54719 | + | 187 | NuclAT_0 | - | - |
| - (54533) | 54533..54719 | + | 187 | NuclAT_0 | - | - |
| N7219_RS24570 (54767) | 54767..56136 | + | 1370 | WP_085947770.1 | IS3-like element IS150 family transposase | - |
| - (56163) | 56163..56203 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (56163) | 56163..56203 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (56163) | 56163..56203 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (56163) | 56163..56203 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| N7219_RS24575 (56189) | 56189..56338 | + | 150 | Protein_78 | plasmid maintenance protein Mok | - |
| N7219_RS24580 (56280) | 56280..56405 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| N7219_RS24585 (56625) | 56625..56855 | + | 231 | WP_001426396.1 | hypothetical protein | - |
| N7219_RS24590 (56853) | 56853..57026 | - | 174 | Protein_81 | hypothetical protein | - |
| N7219_RS24595 (57096) | 57096..57302 | + | 207 | WP_024261895.1 | hypothetical protein | - |
| N7219_RS24600 (57327) | 57327..57614 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| N7219_RS24605 (57733) | 57733..58554 | + | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| N7219_RS24610 (58851) | 58851..59453 | - | 603 | WP_260654181.1 | hypothetical protein | VF |
| N7219_RS24615 (59784) | 59784..60167 | + | 384 | WP_001151566.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| N7219_RS24620 (60301) | 60301..60978 | + | 678 | WP_001348626.1 | PAS domain-containing protein | - |
| N7219_RS24625 (61066) | 61066..61293 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| N7219_RS24630 (61327) | 61327..61689 | + | 363 | WP_000338606.1 | type IV conjugative transfer system pilin TraA | - |
| N7219_RS24635 (61694) | 61694..62005 | + | 312 | WP_000012107.1 | type IV conjugative transfer system protein TraL | - |
| N7219_RS24640 (62027) | 62027..62593 | + | 567 | WP_000399791.1 | type IV conjugative transfer system protein TraE | - |
| N7219_RS24645 (62580) | 62580..63308 | + | 729 | WP_001230808.1 | type-F conjugative transfer system secretin TraK | - |
| N7219_RS24650 (63308) | 63308..64759 | + | 1452 | WP_000146687.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| N7219_RS24655 (64749) | 64749..65315 | + | 567 | WP_001617877.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| N7219_RS24660 (65302) | 65302..65613 | + | 312 | WP_001057272.1 | conjugal transfer protein TrbD | - |
| N7219_RS24665 (65613) | 65613..66128 | + | 516 | WP_000809886.1 | type IV conjugative transfer system lipoprotein TraV | - |
| N7219_RS24670 (66263) | 66263..66484 | + | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| N7219_RS24675 (66644) | 66644..69271 | + | 2628 | WP_001064258.1 | type IV secretion system protein TraC | - |
| N7219_RS24680 (69268) | 69268..69654 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| N7219_RS24685 (69651) | 69651..70283 | + | 633 | WP_001203727.1 | type-F conjugative transfer system protein TraW | - |
| N7219_RS24690 (70280) | 70280..71272 | + | 993 | WP_000830190.1 | conjugal transfer pilus assembly protein TraU | - |
| N7219_RS24695 (71302) | 71302..71607 | + | 306 | WP_000224413.1 | hypothetical protein | - |
| N7219_RS24700 (71616) | 71616..72254 | + | 639 | WP_001080259.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| N7219_RS24705 (72251) | 72251..74101 | + | 1851 | WP_000821866.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| N7219_RS24710 (74128) | 74128..74385 | + | 258 | WP_000864347.1 | conjugal transfer protein TrbE | - |
| N7219_RS24715 (74378) | 74378..75121 | + | 744 | WP_001030401.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| N7219_RS24720 (75251) | 75251..76231 | + | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| N7219_RS24725 (76386) | 76386..77083 | + | 698 | WP_223216367.1 | IS1 family transposase | - |
| N7219_RS24730 (77131) | 77131..77451 | + | 321 | WP_001348757.1 | conjugal transfer protein TrbA | - |
| N7219_RS24735 (77578) | 77578..77862 | + | 285 | WP_001617873.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| N7219_RS24740 (77849) | 77849..78394 | + | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| N7219_RS24745 (78324) | 78324..78671 | + | 348 | WP_071571857.1 | P-type conjugative transfer protein TrbJ | - |
| N7219_RS24750 (78652) | 78652..79044 | + | 393 | WP_000659962.1 | F-type conjugal transfer protein TrbF | - |
| N7219_RS24755 (79031) | 79031..80404 | + | 1374 | WP_000944328.1 | conjugal transfer pilus assembly protein TraH | - |
| N7219_RS24760 (80401) | 80401..83220 | + | 2820 | WP_001007062.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| N7219_RS24765 (83239) | 83239..83736 | + | 498 | WP_000605862.1 | entry exclusion protein | - |
| N7219_RS24770 (83768) | 83768..84499 | + | 732 | WP_000850429.1 | conjugal transfer complement resistance protein TraT | - |
| N7219_RS24775 (84702) | 84702..85481 | + | 780 | WP_000199914.1 | hypothetical protein | - |
| N7219_RS24780 (85478) | 85478..87667 | + | 2190 | WP_024946705.1 | type IV conjugative transfer system coupling protein TraD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|